vOTU-060033

Overview

vOTU representative UHGV-1930553

No. of genomes 2

Genome length 36,223 bps

Completeness 91.33% (high-quality)

Host Gemmiger qucibialis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-060033
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00060 › vSUBFAM-05954 › vGENUS-14082 › vSUBGEN-23295 › vOTU-060033
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Gemmiger › Gemmiger qucibialis
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1930553
BioSample	NA
Genome length	36,223 bps
CheckV completeness	91.33% (high-quality)
CheckV contamination	0.00%
CDS count	47
CDS density	93.39%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1930553_1	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1930553_1	eggNOG-mapper	1226322.HMPREF1545_00059	tape measure	NA
UHGV-1930553_1	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-1930553_2	PHROG	phrog_706	NA	unknown function
UHGV-1930553_2	UniRef90	UniRef90_UPI0019576839	Gp15 family bacteriophage protein	NA
UHGV-1930553_2	eggNOG-mapper	411459.RUMOBE_01383	Bacteriophage Gp15 protein	NA
UHGV-1930553_2	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-1930553_2	Structural annotation	PF06854	NA	NA
UHGV-1930553_3	PHROG	phrog_11299	NA	unknown function
UHGV-1930553_3	UniRef90	UniRef90_UPI001C03A209	V-type proton ATPase subunit E	NA
UHGV-1930553_3	eggNOG-mapper	411471.SUBVAR_06935	NA	NA
UHGV-1930553_4	PHROG	phrog_3099	NA	unknown function
UHGV-1930553_4	eggNOG-mapper	411471.SUBVAR_06936	NA	NA
UHGV-1930553_4	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1930553_5	eggNOG-mapper	693746.OBV_18140	NA	NA
UHGV-1930553_5	Structural annotation	PF08873	NA	NA
UHGV-1930553_6	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1930553_6	UniRef90	UniRef90_UPI001967B4B3	minor capsid protein	NA
UHGV-1930553_6	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-1930553_6	Structural annotation	PF11114	NA	NA
UHGV-1930553_7	PHROG	phrog_3366	NA	unknown function
UHGV-1930553_7	Structural annotation	PF20536, MF_01370, TIGR02126	NA	NA
UHGV-1930553_8	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1930553_8	eggNOG-mapper	411471.SUBVAR_06939	NA	NA
UHGV-1930553_10	PHROG	phrog_422	major head protein	head and packaging
UHGV-1930553_10	eggNOG-mapper	693746.OBV_18090	NA	NA
UHGV-1930553_10	Structural annotation	PF21703, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-1930553_11	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-1930553_11	UniRef90	UniRef90_A0A4R1QTK7	Minor structural protein GP20	NA
UHGV-1930553_11	eggNOG-mapper	411471.SUBVAR_06994	Phage minor structural protein GP20	NA
UHGV-1930553_11	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-1930553_11	Structural annotation	PF06810	NA	NA
UHGV-1930553_13	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1930553_13	UniRef90	UniRef90_UPI0006814CA4	phage minor capsid protein	NA
UHGV-1930553_13	eggNOG-mapper	411471.SUBVAR_06995	NA	NA
UHGV-1930553_13	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1930553_13	COG	COG2369	NA	NA
UHGV-1930553_13	Structural annotation	PF06152	NA	NA
UHGV-1930553_14	PHROG	phrog_533	portal protein	head and packaging
UHGV-1930553_14	UniRef90	UniRef90_D1PRG7	Putative phage minor capsid protein	NA
UHGV-1930553_14	eggNOG-mapper	411471.SUBVAR_06996	NA	NA
UHGV-1930553_14	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1930553_16	PHROG	phrog_373	anti-repressor	transcription regulation
UHGV-1930553_16	UniRef90	UniRef90_UPI001C3ED288	Rha family transcriptional regulator	NA
UHGV-1930553_16	eggNOG-mapper	665959.HMPREF1013_00872	Phage regulatory protein Rha (Phage_pRha)	NA
UHGV-1930553_16	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-1930553_16	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-1930553_16	COG	COG3646	Phage regulatory protein Rha	NA
UHGV-1930553_18	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1930553_18	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-1930553_18	UniRef90	UniRef90_A0A367GH72	PBSX family phage terminase large subunit	NA
UHGV-1930553_18	eggNOG-mapper	411471.SUBVAR_06998	Phage terminase, large subunit, PBSX family	NA
UHGV-1930553_18	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-1930553_18	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-1930553_18	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1930553_18	COG	COG1783	Phage terminase large subunit	NA
UHGV-1930553_18	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1930553_20	KOfam	K02601	nusG; transcription termination/antitermination protein NusG	NA
UHGV-1930553_20	PHROG	phrog_6386	transcription antiterminator	transcription regulation
UHGV-1930553_20	UniRef90	UniRef90_A0A367GGW9	Antitermination protein NusG	NA
UHGV-1930553_20	eggNOG-mapper	1125700.HMPREF9195_01928	Transcription antitermination protein, NusG	NA
UHGV-1930553_20	Pfam	PF02357	Transcription termination factor nusG	NusG
UHGV-1930553_20	COG	COG0250	Transcription termination/antitermination protein NusG	NA
UHGV-1930553_20	Structural annotation	PF02357, MF_00951, NF033641, COG0250	NA	NA
UHGV-1930553_21	PHROG	phrog_426	terminase small subunit	head and packaging
UHGV-1930553_21	UniRef90	UniRef90_A0A6N8H2N8	NA	NA
UHGV-1930553_21	eggNOG-mapper	411471.SUBVAR_07001	NA	NA
UHGV-1930553_21	Pfam	PF11985	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
UHGV-1930553_21	Structural annotation	PF11985	NA	NA
UHGV-1930553_22	PHROG	phrog_25462	NA	unknown function
UHGV-1930553_22	UniRef90	UniRef90_A0A367GGT3	Type VI secretion protein	NA
UHGV-1930553_22	eggNOG-mapper	552398.HMPREF0866_03124	NA	NA
UHGV-1930553_22	Structural annotation	PF01638, MF_01819, NF002926, COG1733	NA	NA
UHGV-1930553_23	PHROG	phrog_462	lipoprotein	other
UHGV-1930553_23	eggNOG-mapper	411471.SUBVAR_07003	NA	NA
UHGV-1930553_24	PHROG	phrog_532	late transcriptional activator	transcription regulation
UHGV-1930553_24	UniRef90	UniRef90_A0A367GIM6	DNA-binding protein	NA
UHGV-1930553_24	eggNOG-mapper	552398.HMPREF0866_03126	Mor transcription activator	NA
UHGV-1930553_24	Pfam	PF08765	Mor transcription activator family	Mor
UHGV-1930553_24	COG	COG5566	Transcriptional regulator, middle operon regulator (Mor) family	NA
UHGV-1930553_24	Structural annotation	PF08765, COG5566	NA	NA
UHGV-1930553_25	PHROG	phrog_286	NA	unknown function
UHGV-1930553_25	UniRef90	UniRef90_A0A367GGT8	Regulatory protein GemA	NA
UHGV-1930553_25	eggNOG-mapper	411471.SUBVAR_07005	NA	NA
UHGV-1930553_25	Pfam	PF06252	Bacteriophage Mu, GemA protein	GemA
UHGV-1930553_25	Structural annotation	PF06252	NA	NA
UHGV-1930553_26	PHROG	phrog_491	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-1930553_26	UniRef90	UniRef90_D1PRH7	Putative bacteriophage Mu Gam like protein	NA
UHGV-1930553_26	eggNOG-mapper	411471.SUBVAR_07006	Bacteriophage Mu Gam like protein	NA
UHGV-1930553_26	Pfam	PF07352	Bacteriophage Mu Gam like protein	Phage_Mu_Gam
UHGV-1930553_26	COG	COG4396	Mu-like prophage host-nuclease inhibitor protein Gam	NA
UHGV-1930553_26	Structural annotation	PF07352, COG4396	NA	NA
UHGV-1930553_27	PHROG	phrog_5671	NA	unknown function
UHGV-1930553_27	eggNOG-mapper	293826.Amet_0399	NA	NA
UHGV-1930553_29	KOfam	K07132	MuB; ATP-dependent target DNA activator	NA
UHGV-1930553_29	PHROG	phrog_296	DNA transposition protein	integration and excision
UHGV-1930553_29	UniRef90	UniRef90_A0A367GJ21	DNA transposition protein	NA
UHGV-1930553_29	eggNOG-mapper	552398.HMPREF0866_03135	AAA domain	NA
UHGV-1930553_29	Pfam	PF13401	AAA domain	AAA_22
UHGV-1930553_29	COG	COG2842	Bacteriophage DNA transposition protein, AAA+ family ATPase	NA
UHGV-1930553_29	Structural annotation	PF13401, MF_01407, TIGR03015, COG2842	NA	NA
UHGV-1930553_30	PHROG	phrog_310	transposase	integration and excision
UHGV-1930553_30	UniRef90	UniRef90_A0A367GGX9	MerR family transcriptional regulator	NA
UHGV-1930553_30	eggNOG-mapper	552398.HMPREF0866_03136	Mu transposase, C-terminal	NA
UHGV-1930553_30	Pfam	PF09039	Mu DNA binding, I gamma subdomain	HTH_Tnp_Mu_2
UHGV-1930553_30	Pfam	PF00665	Integrase core domain	rve
UHGV-1930553_30	Pfam	PF09299	Mu transposase, C-terminal	Mu-transpos_C
UHGV-1930553_30	COG	COG2801	Transposase InsO and inactivated derivatives	NA
UHGV-1930553_30	Structural annotation	PF02914, PF09039, PF09299, PF21531, NF033594, TIGR01764, COG3316, COG3311	NA	NA
UHGV-1930553_33	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-1930553_33	UniRef90	UniRef90_A0A367GH97	XRE family transcriptional regulator	NA
UHGV-1930553_33	eggNOG-mapper	445972.ANACOL_00516	Helix-turn-helix XRE-family like proteins	NA
UHGV-1930553_33	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1930553_33	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-1930553_34	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1930553_34	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1930553_34	UniRef90	UniRef90_A0A367GIA9	HTH cro/C1-type domain-containing protein	NA
UHGV-1930553_34	eggNOG-mapper	552398.HMPREF0866_03140	Helix-turn-helix XRE-family like proteins	NA
UHGV-1930553_34	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1930553_34	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1930553_34	Structural annotation	PF12844, NF041951, COG1476	NA	NA
UHGV-1930553_35	UniRef90	UniRef90_UPI001CC10DA4	NA	NA
UHGV-1930553_35	eggNOG-mapper	1235798.C817_03195	NA	NA
UHGV-1930553_35	Pfam	PF18832	Large polyvalent protein-associated domain 18	LPD18
UHGV-1930553_35	Pfam	PF12960	NA	DUF3849
UHGV-1930553_35	Pfam	PF18830	Large polyvalent protein-associated domain 16	LPD16
UHGV-1930553_35	COG	COG1669	Predicted nucleotidyltransferase MJ0435	NA
UHGV-1930553_36	UniRef90	UniRef90_UPI001D0EEF62	transposon-transfer assisting family protein	NA
UHGV-1930553_36	eggNOG-mapper	1235798.C817_04769	Putative tranposon-transfer assisting protein	NA
UHGV-1930553_36	Pfam	PF14203	Putative transposon-transfer assisting protein	TTRAP
UHGV-1930553_37	UniRef90	UniRef90_A0A373NRK0	NA	NA
UHGV-1930553_37	eggNOG-mapper	500632.CLONEX_00726	YodL-like	NA
UHGV-1930553_37	Pfam	PF14191	YodL-like	YodL
UHGV-1930553_37	Pfam	PF18832	Large polyvalent protein-associated domain 18	LPD18
UHGV-1930553_37	Pfam	PF14195	NA	DUF4316
UHGV-1930553_37	COG	COG4227	Antirestriction protein ArdC	NA
UHGV-1930553_38	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1930553_38	UniRef90	UniRef90_D4LNW7	Helix-turn-helix	NA
UHGV-1930553_38	eggNOG-mapper	633697.EubceDRAFT1_2580	Helix-turn-helix XRE-family like proteins	NA
UHGV-1930553_38	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1930553_38	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-1930553_38	Structural annotation	PF01381, MF_00535, NF041951, COG1396	NA	NA
UHGV-1930553_39	PHROG	phrog_87	metallo-protease	other
UHGV-1930553_39	UniRef90	UniRef90_U2DIS5	Peptidase_M78 domain-containing protein	NA
UHGV-1930553_39	eggNOG-mapper	1506994.JNLQ01000002_gene2468	NA	NA
UHGV-1930553_39	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-1930553_39	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-1930553_40	eggNOG-mapper	1280680.AUJU01000038_gene3329	NA	NA
UHGV-1930553_41	PHROG	phrog_26285	NA	unknown function
UHGV-1930553_41	UniRef90	UniRef90_A0A367GL84	Rlx protein	NA
UHGV-1930553_41	eggNOG-mapper	97139.C824_05926	NA	NA
UHGV-1930553_41	Pfam	PF03432	Relaxase/Mobilisation nuclease domain	Relaxase
UHGV-1930553_41	COG	COG3843	Type IV secretory pathway, VirD2 component (relaxase)	NA
UHGV-1930553_41	Structural annotation	PF03432, PF11083, NF041893, COG2882	NA	NA
UHGV-1930553_42	UniRef90	UniRef90_A0A2A7AXI0	Plasmid mobilization relaxosome protein MobC	NA
UHGV-1930553_42	eggNOG-mapper	411470.RUMGNA_01132	Bacterial mobilisation protein (MobC)	NA
UHGV-1930553_42	Pfam	PF05713	Bacterial mobilisation protein (MobC)	MobC
UHGV-1930553_42	Structural annotation	PF19514, NF010432	NA	NA
UHGV-1930553_44	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-1930553_44	PHROG	phrog_95	integrase	integration and excision
UHGV-1930553_44	UniRef90	UniRef90_A0A173T8R1	Multiple promoter invertase	NA
UHGV-1930553_44	eggNOG-mapper	1121334.KB911069_gene1558	NA	NA
UHGV-1930553_44	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-1930553_44	Pfam	PF07508	Recombinase	Recombinase
UHGV-1930553_44	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-1930553_44	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-1930553_44	Structural annotation	PF07508, PF00239, PF18822, NF041201, COG1961	NA	NA
UHGV-1930553_45	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-1930553_45	PHROG	phrog_95	integrase	integration and excision
UHGV-1930553_45	UniRef90	UniRef90_A0A2A7AXQ5	Recombinase domain-containing protein	NA
UHGV-1930553_45	eggNOG-mapper	398512.JQKC01000035_gene4913	Resolvase, N terminal domain	NA
UHGV-1930553_45	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-1930553_45	Pfam	PF07508	Recombinase	Recombinase
UHGV-1930553_45	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-1930553_46	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-1930553_46	PHROG	phrog_95	integrase	integration and excision
UHGV-1930553_46	UniRef90	UniRef90_A0A173T809	Transposase and inactivated derivatives	NA
UHGV-1930553_46	eggNOG-mapper	1519439.JPJG01000114_gene1831	NA	NA
UHGV-1930553_46	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-1930553_46	Pfam	PF07508	Recombinase	Recombinase
UHGV-1930553_46	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-1930553_46	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-1930553_46	Structural annotation	PF07508, PF00239, PF18822, NF041201, COG1961	NA	NA
UHGV-1930553_47	UniRef90	UniRef90_A0A7U9RB04	Resolvase/invertase-type recombinase catalytic domain-containing protein	NA
UHGV-1930553_47	eggNOG-mapper	1507.HMPREF0262_00824	Resolvase, N terminal domain	NA
UHGV-1930553_47	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1930553	Yes	36,223 bps	55.30%	91.33%	0.9623
UHGV-2032377	No	12,312 bps	58.81%	31.65%	0.9682