vOTU-060138

Overview

vOTU representative UHGV-0193155

No. of genomes 2

Genome length 29,124 bps

Completeness 91.81% (high-quality)

Host RGIG4076 sp905198155

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-060138
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-02308 › vGENUS-02745 › vSUBGEN-32342 › vOTU-060138
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › RGIG4076 › RGIG4076 sp905198155
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0193155
BioSample	SAMN09781741
Genome length	29,124 bps
CheckV completeness	91.81% (high-quality)
CheckV contamination	0.00%
CDS count	46
CDS density	91.22%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0193155_2	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0193155_2	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0193155_2	UniRef90	UniRef90_A0A2V2GQ57	HNH endonuclease	NA
UHGV-0193155_2	eggNOG-mapper	1226322.HMPREF1545_00111	HNH nucleases	NA
UHGV-0193155_2	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0193155_2	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0193155_2	Structural annotation	PF05766, NF008448	NA	NA
UHGV-0193155_4	PHROG	phrog_22740	NA	unknown function
UHGV-0193155_4	eggNOG-mapper	411483.FAEPRAA2165_01884	DNA N-6-adenine-methyltransferase (Dam)	NA
UHGV-0193155_7	KOfam	K21919	KCTD9; BTB/POZ domain-containing protein KCTD9	NA
UHGV-0193155_7	PHROG	phrog_923	NA	unknown function
UHGV-0193155_7	Pfam	PF00805	Pentapeptide repeats (8 copies)	Pentapeptide
UHGV-0193155_7	Structural annotation	PF13599, NF000421, COG1357	NA	NA
UHGV-0193155_9	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0193155_9	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0193155_9	UniRef90	UniRef90_UPI001915D0A5	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0193155_9	eggNOG-mapper	545697.HMPREF0216_02819	Endodeoxyribonuclease RusA	NA
UHGV-0193155_9	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0193155_9	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0193155_9	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0193155_10	PHROG	phrog_1408	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0193155_10	eggNOG-mapper	1095750.HMPREF9970_1674	NA	NA
UHGV-0193155_10	Structural annotation	PF01978, NF000243, COG0735	NA	NA
UHGV-0193155_11	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0193155_11	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0193155_11	UniRef90	UniRef90_A0A8J6IQ72	Single-stranded DNA-binding protein	NA
UHGV-0193155_11	eggNOG-mapper	748224.HMPREF9436_03359	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0193155_11	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0193155_11	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0193155_11	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0193155_11	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0193155_11	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0193155_12	eggNOG-mapper	1507.HMPREF0262_00432	NA	NA
UHGV-0193155_20	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0193155_20	UniRef90	UniRef90_UPI001E2DC2C5	helix-turn-helix domain-containing protein	NA
UHGV-0193155_20	eggNOG-mapper	321955.AAGP01000036_gene3431	Helix-turn-helix XRE-family like proteins	NA
UHGV-0193155_20	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0193155_20	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0193155_20	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0193155_21	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0193155_21	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0193155_21	UniRef90	UniRef90_UPI000464DC06	helix-turn-helix domain-containing protein	NA
UHGV-0193155_21	eggNOG-mapper	864563.HMPREF9166_0595	Helix-turn-helix XRE-family like proteins	NA
UHGV-0193155_21	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0193155_21	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0193155_21	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0193155_22	eggNOG-mapper	445971.ANASTE_01156	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0193155_22	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0193155_22	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0193155_22	Structural annotation	PF12844, NF041951, COG1396	NA	NA
UHGV-0193155_23	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0193155_23	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0193155_23	UniRef90	UniRef90_UPI00082C2E09	XRE family transcriptional regulator	NA
UHGV-0193155_23	eggNOG-mapper	1507.HMPREF0262_00168	Peptidase S24-like	NA
UHGV-0193155_23	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0193155_23	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0193155_23	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0193155_23	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-0193155_25	KOfam	K14059	int; integrase	NA
UHGV-0193155_25	PHROG	phrog_1	integrase	integration and excision
UHGV-0193155_25	UniRef90	UniRef90_A0A7X7EIT8	Tyrosine-type recombinase/integrase	NA
UHGV-0193155_25	eggNOG-mapper	1408437.JNJN01000039_gene380	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0193155_25	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0193155_25	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0193155_25	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0193155_25	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0193155_28	PHROG	phrog_25567	NA	unknown function
UHGV-0193155_28	UniRef90	UniRef90_UPI00164AED9E	helix-turn-helix domain-containing protein	NA
UHGV-0193155_28	eggNOG-mapper	511680.BUTYVIB_00699	NA	NA
UHGV-0193155_28	Structural annotation	NF040522, COG2944	NA	NA
UHGV-0193155_30	PHROG	phrog_199	holin	lysis
UHGV-0193155_30	UniRef90	UniRef90_UPI001F18BC7F	phage holin family protein	NA
UHGV-0193155_30	eggNOG-mapper	1160721.RBI_I01565	Bacteriophage holin family	NA
UHGV-0193155_30	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0193155_30	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0193155_30	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-0193155_30	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0193155_31	KOfam	K19304	mepM; murein DD-endopeptidase [EC:3.4.24.-]	NA
UHGV-0193155_31	PHROG	phrog_7767	metallo-endopeptidase	other
UHGV-0193155_31	UniRef90	UniRef90_A0A2A2SHG9	Peptidase M23	NA
UHGV-0193155_31	eggNOG-mapper	1234595.C725_1512	Peptidase family M23	NA
UHGV-0193155_31	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-0193155_31	COG	COG0739	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	NA
UHGV-0193155_32	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0193155_32	UniRef90	UniRef90_A0A316NPB5	Peptidase S74 domain-containing protein	NA
UHGV-0193155_32	eggNOG-mapper	1123263.AUKY01000068_gene489	Phage minor structural protein	NA
UHGV-0193155_32	Pfam	PF18994	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
UHGV-0193155_32	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0193155_32	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0193155_32	COG	COG4926	Phage-related protein	NA
UHGV-0193155_32	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0193155_33	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0193155_33	UniRef90	UniRef90_UPI0001668E5D	phage tail family protein	NA
UHGV-0193155_33	eggNOG-mapper	1123263.AUKY01000068_gene490	tail component	NA
UHGV-0193155_33	COG	COG4722	Phage-related protein YomH	NA
UHGV-0193155_33	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0193155_34	KOfam	K20283	GOLGA4; golgin subfamily A member 4	NA
UHGV-0193155_34	PHROG	phrog_10613	tail length tape measure protein	tail
UHGV-0193155_34	UniRef90	UniRef90_UPI001C12009F	peptidoglycan DD-metalloendopeptidase family protein	NA
UHGV-0193155_34	eggNOG-mapper	1160721.RBI_II00528	Phage tail tape measure protein, TP901 family	NA
UHGV-0193155_34	COG	COG1006	Multisubunit Na+/H+ antiporter, MnhC subunit	NA
UHGV-0193155_34	Structural annotation	PF20155	NA	NA
UHGV-0193155_37	PHROG	phrog_88	major tail protein	tail
UHGV-0193155_37	UniRef90	UniRef90_G9YSC5	Phage major tail protein, phi13 family	NA
UHGV-0193155_37	eggNOG-mapper	33035.JPJF01000039_gene278	NA	NA
UHGV-0193155_37	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0193155_37	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-0193155_38	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0193155_38	UniRef90	UniRef90_A0A1C6FG30	Phage protein, HK97 gp10 family	NA
UHGV-0193155_38	eggNOG-mapper	908340.HMPREF9406_2573	NA	NA
UHGV-0193155_38	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0193155_38	Structural annotation	TIGR01725	NA	NA
UHGV-0193155_39	PHROG	phrog_78	tail terminator	connector
UHGV-0193155_39	eggNOG-mapper	33035.JPJF01000039_gene276	NA	NA
UHGV-0193155_40	PHROG	phrog_19734	NA	unknown function
UHGV-0193155_40	UniRef90	UniRef90_A0A3R6AW46	Head-tail adaptor protein	NA
UHGV-0193155_40	eggNOG-mapper	1235798.C817_04587	NA	NA
UHGV-0193155_40	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0193155_41	PHROG	phrog_2550	NA	unknown function
UHGV-0193155_41	UniRef90	UniRef90_UPI0008717716	phage head-tail connector protein	NA
UHGV-0193155_41	eggNOG-mapper	1226322.HMPREF1545_00117	NA	NA
UHGV-0193155_41	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0193155_42	PHROG	phrog_10	major head protein	head and packaging
UHGV-0193155_42	UniRef90	UniRef90_UPI000679B959	phage major capsid protein	NA
UHGV-0193155_42	eggNOG-mapper	1226322.HMPREF1545_00116	phage major capsid protein, HK97 family	NA
UHGV-0193155_42	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0193155_42	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0193155_42	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0193155_42	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0193155_43	KOfam	K06904	NA	NA
UHGV-0193155_43	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0193155_43	UniRef90	UniRef90_UPI00189B2313	HK97 family phage prohead protease	NA
UHGV-0193155_43	eggNOG-mapper	1226322.HMPREF1545_00115	Phage prohead protease, HK97 family	NA
UHGV-0193155_43	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0193155_43	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0193155_43	COG	COG3740	Phage head maturation protease	NA
UHGV-0193155_43	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0193155_44	PHROG	phrog_12	portal protein	head and packaging
UHGV-0193155_44	UniRef90	UniRef90_A0A1C6H763	Phage portal protein, HK97 family	NA
UHGV-0193155_44	eggNOG-mapper	1226322.HMPREF1545_00114	Phage portal protein, HK97 family	NA
UHGV-0193155_44	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0193155_44	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0193155_44	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0193155_44	Structural annotation	PF04860, MF_04120, TIGR01537, COG4695	NA	NA
UHGV-0193155_45	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0193155_45	UniRef90	UniRef90_R5VJG5	Phage terminase large subunit	NA
UHGV-0193155_45	eggNOG-mapper	1121428.DESHY_20134___1	Phage Terminase	NA
UHGV-0193155_45	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0193155_45	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0193155_45	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0193155_45	Structural annotation	PF20441, PF03354, MF_04013, TIGR01547, COG4626	NA	NA
UHGV-0193155_46	PHROG	phrog_361	terminase small subunit	head and packaging
UHGV-0193155_46	UniRef90	UniRef90_R5V087	Phage terminase small subunit P27 family	NA
UHGV-0193155_46	eggNOG-mapper	596315.HMPREF0634_0388	Phage terminase, small subunit	NA
UHGV-0193155_46	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0193155_46	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0193155	Yes	29,124 bps	53.59%	91.81%	0.9782
UHGV-0180681	No	26,649 bps	53.61%	84.01%	0.9753