vOTU-060204

Overview

vOTU representative UHGV-0196880

No. of genomes 4

Genome length 37,387 bps

Completeness 99.90% (high-quality)

Host Megasphaeraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-060204
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-00395 › vGENUS-02201 › vSUBGEN-18232 › vOTU-060204
Host taxonomy	Bacteria › Firmicutes C › Negativicutes › Veillonellales › Megasphaeraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0196880
BioSample	SAMN05827183
Genome length	37,387 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	61
CDS density	90.97%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0196880_1	UniRef90	UniRef90_A0A6N7W2D5	SWIM-type domain-containing protein	NA
UHGV-0196880_1	eggNOG-mapper	525254.HMPREF0072_1328	Swim zinc finger domain protein	NA
UHGV-0196880_3	UniRef90	UniRef90_UPI00068C50D9	transcriptional regulator	NA
UHGV-0196880_3	eggNOG-mapper	936589.HMPREF1521_1175	sequence-specific DNA binding	NA
UHGV-0196880_3	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0196880_3	Structural annotation	PF13443, MF_00535, NF041951, COG1396	NA	NA
UHGV-0196880_4	UniRef90	UniRef90_W1V8T2	NA	NA
UHGV-0196880_4	eggNOG-mapper	1347392.CCEZ01000005_gene1206	NA	NA
UHGV-0196880_4	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0196880_4	Structural annotation	PF05339, NF041951, COG1476	NA	NA
UHGV-0196880_6	eggNOG-mapper	1027292.HMPREF9372_3404	NA	NA
UHGV-0196880_6	Structural annotation	PF11614, NF041740, COG5066	NA	NA
UHGV-0196880_9	PHROG	phrog_585	NA	unknown function
UHGV-0196880_9	UniRef90	UniRef90_A0A412CHE5	NA	NA
UHGV-0196880_9	eggNOG-mapper	862517.HMPREF9225_1672	NA	NA
UHGV-0196880_9	Pfam	PF10711	NA	DUF2513
UHGV-0196880_10	UniRef90	UniRef90_A0A6L6L8R3	Zinc-ribbon domain-containing protein	NA
UHGV-0196880_11	PHROG	phrog_16447	NA	unknown function
UHGV-0196880_11	UniRef90	UniRef90_UPI0009E7E6A9	NA	NA
UHGV-0196880_11	eggNOG-mapper	338963.Pcar_3040	NA	NA
UHGV-0196880_11	Pfam	PF10083	NA	DUF2321
UHGV-0196880_11	COG	COG4306	NA	NA
UHGV-0196880_11	Structural annotation	PF10083, COG4306	NA	NA
UHGV-0196880_12	PHROG	phrog_1672	NA	unknown function
UHGV-0196880_12	UniRef90	UniRef90_S7HT72	NA	NA
UHGV-0196880_18	PHROG	phrog_8470	NA	unknown function
UHGV-0196880_18	UniRef90	UniRef90_UPI00073F3B84	PcfJ domain-containing protein	NA
UHGV-0196880_18	eggNOG-mapper	717606.PaecuDRAFT_3105	PcfJ-like protein	NA
UHGV-0196880_18	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-0196880_19	PHROG	phrog_15609	NA	unknown function
UHGV-0196880_19	UniRef90	UniRef90_UPI00073F64A5	NA	NA
UHGV-0196880_19	eggNOG-mapper	1232428.CAVO010000003_gene1018	NA	NA
UHGV-0196880_19	Pfam	PF11300	NA	DUF3102
UHGV-0196880_19	COG	COG0188	DNA gyrase/topoisomerase IV, subunit A	NA
UHGV-0196880_19	Structural annotation	PF11300, NF038070	NA	NA
UHGV-0196880_21	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0196880_21	eggNOG-mapper	1232428.CAVO010000003_gene1017	NA	NA
UHGV-0196880_21	Structural annotation	PF21578	NA	NA
UHGV-0196880_22	PHROG	phrog_1682	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0196880_22	UniRef90	UniRef90_UPI000930BD90	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0196880_22	eggNOG-mapper	1226322.HMPREF1545_04070	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	NA
UHGV-0196880_22	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0196880_22	Structural annotation	PF19595, NF007305, COG4570	NA	NA
UHGV-0196880_24	PHROG	phrog_32878	NA	unknown function
UHGV-0196880_24	Pfam	PF04448	NA	DUF551
UHGV-0196880_24	Structural annotation	NF041588	NA	NA
UHGV-0196880_25	PHROG	phrog_37395	NA	unknown function
UHGV-0196880_26	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0196880_26	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0196880_27	KOfam	K22014	Nu1, Noh; terminase small subunit / prophage DNA-packing protein	NA
UHGV-0196880_27	PHROG	phrog_57	terminase small subunit	head and packaging
UHGV-0196880_27	UniRef90	UniRef90_A0A1M7YBS6	Phage DNA packaging protein, Nu1 subunit of terminase	NA
UHGV-0196880_27	eggNOG-mapper	1273103.NM10_02282	NA	NA
UHGV-0196880_27	COG	COG4220	Phage DNA packaging protein, Nu1 subunit of terminase	NA
UHGV-0196880_27	Structural annotation	PF07471, NF040990, COG4220	NA	NA
UHGV-0196880_28	KOfam	K21512	gpA; terminase, large subunit [EC:3.1.21.4]	NA
UHGV-0196880_28	PHROG	phrog_15	terminase large subunit	head and packaging
UHGV-0196880_28	UniRef90	UniRef90_A0A2S0M817	Terminase	NA
UHGV-0196880_28	eggNOG-mapper	1064535.MELS_1091	Phage terminase large subunit (GpA)	NA
UHGV-0196880_28	Pfam	PF05876	Phage terminase large subunit gpA, ATPase domain	GpA_ATPase
UHGV-0196880_28	Pfam	PF20454	Terminase large subunit gpA, endonuclease domain	GpA_nuclease
UHGV-0196880_28	COG	COG5525	Phage terminase, large subunit GpA	NA
UHGV-0196880_28	HAMAP	MF_04144	Terminase, large subunit	NA
UHGV-0196880_28	Structural annotation	PF05876, PF20454, MF_04144, TIGR01547, COG5525	NA	NA
UHGV-0196880_29	PHROG	phrog_118	head-tail adaptor	connector
UHGV-0196880_29	UniRef90	UniRef90_UPI00073EF5B2	NA	NA
UHGV-0196880_29	eggNOG-mapper	936573.HMPREF1147_1716	NA	NA
UHGV-0196880_29	Pfam	PF19645	NA	DUF6148
UHGV-0196880_29	Structural annotation	PF19645	NA	NA
UHGV-0196880_30	PHROG	phrog_21	portal protein	head and packaging
UHGV-0196880_30	UniRef90	UniRef90_UPI00073F54DB	phage portal protein	NA
UHGV-0196880_30	eggNOG-mapper	1064535.MELS_1093	Phage portal protein	NA
UHGV-0196880_30	Pfam	PF05136	Phage portal protein, lambda family	Phage_portal_2
UHGV-0196880_30	NCBIFam	TIGR01539.1	phage portal protein	NA
UHGV-0196880_30	COG	COG5511	Phage capsid protein	NA
UHGV-0196880_30	Structural annotation	PF05136, MF_04135, TIGR01539, COG5511	NA	NA
UHGV-0196880_31	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0196880_31	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0196880_31	UniRef90	UniRef90_UPI00073EB35F	Clp protease ClpP	NA
UHGV-0196880_31	eggNOG-mapper	1064535.MELS_1094	Clp protease	NA
UHGV-0196880_31	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0196880_31	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0196880_31	Structural annotation	PF00574, MF_00444, NF011089, COG0740	NA	NA
UHGV-0196880_32	PHROG	phrog_49	head decoration	head and packaging
UHGV-0196880_32	UniRef90	UniRef90_UPI00073F9C7C	head decoration protein	NA
UHGV-0196880_32	eggNOG-mapper	1064535.MELS_1095	Bacteriophage lambda head decoration protein D	NA
UHGV-0196880_32	Pfam	PF02924	Bacteriophage lambda head decoration protein D	HDPD
UHGV-0196880_32	Structural annotation	PF02924, COG5471	NA	NA
UHGV-0196880_33	PHROG	phrog_29	major head protein	head and packaging
UHGV-0196880_33	UniRef90	UniRef90_UPI00073E3456	major capsid protein	NA
UHGV-0196880_33	eggNOG-mapper	1064535.MELS_1096	Phage major capsid protein E	NA
UHGV-0196880_33	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-0196880_33	Structural annotation	PF03864, MF_04133, TIGR04387, COG4653	NA	NA
UHGV-0196880_35	PHROG	phrog_2551	minor tail protein	tail
UHGV-0196880_35	UniRef90	UniRef90_A0A127SL33	ATP-binding sugar transporter from pro-phage	NA
UHGV-0196880_35	eggNOG-mapper	1273103.NM10_02242	NA	NA
UHGV-0196880_35	Structural annotation	PF13856	NA	NA
UHGV-0196880_36	PHROG	phrog_27	tail completion or Neck1 protein	connector
UHGV-0196880_36	UniRef90	UniRef90_UPI001E3FE5ED	phage tail protein	NA
UHGV-0196880_36	eggNOG-mapper	1064535.MELS_1099	Prophage minor tail protein Z (GPZ)	NA
UHGV-0196880_36	Structural annotation	PF06763	NA	NA
UHGV-0196880_37	PHROG	phrog_2581	virion structural protein	head and packaging
UHGV-0196880_37	eggNOG-mapper	1273103.NM10_02232	NA	NA
UHGV-0196880_37	Structural annotation	PF08873, COG5003	NA	NA
UHGV-0196880_38	eggNOG-mapper	1262914.BN533_01006	Product inferred by homology to UniProt	NA
UHGV-0196880_39	KOfam	K06907	NA	NA
UHGV-0196880_39	PHROG	phrog_23	tail sheath	tail
UHGV-0196880_39	UniRef90	UniRef90_UPI00073F1176	phage tail protein	NA
UHGV-0196880_39	eggNOG-mapper	1064535.MELS_1102	COG3497 Phage tail sheath protein FI	NA
UHGV-0196880_39	COG	COG3497	Phage tail sheath protein FI	NA
UHGV-0196880_39	Structural annotation	PF10758, TIGR03355, COG3497	NA	NA
UHGV-0196880_40	KOfam	K06908	NA	NA
UHGV-0196880_40	PHROG	phrog_55	head closure	connector
UHGV-0196880_40	UniRef90	UniRef90_UPI00073F2DD0	phage major tail tube protein	NA
UHGV-0196880_40	eggNOG-mapper	1064535.MELS_1103	tail tube protein	NA
UHGV-0196880_40	Pfam	PF04985	Phage tail tube protein FII	Phage_tube
UHGV-0196880_40	COG	COG3498	Phage tail tube protein FII	NA
UHGV-0196880_40	Structural annotation	PF04985, TIGR01611, COG3498	NA	NA
UHGV-0196880_41	PHROG	phrog_3140	tail assembly chaperone	tail
UHGV-0196880_41	UniRef90	UniRef90_UPI001E3696E8	phage tail assembly protein	NA
UHGV-0196880_41	eggNOG-mapper	349161.Dred_1214	NA	NA
UHGV-0196880_41	Structural annotation	PF10109	NA	NA
UHGV-0196880_43	PHROG	phrog_28	tail length tape measure protein	tail
UHGV-0196880_43	UniRef90	UniRef90_UPI000ACA7156	phage tail tape measure protein	NA
UHGV-0196880_43	eggNOG-mapper	1064535.MELS_1105	Phage-related minor tail protein	NA
UHGV-0196880_43	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0196880_43	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0196880_43	COG	COG5283	Phage-related tail protein	NA
UHGV-0196880_43	Structural annotation	PF10145, MF_04138, TIGR01760, COG5280	NA	NA
UHGV-0196880_44	PHROG	phrog_46	tail protein	tail
UHGV-0196880_44	UniRef90	UniRef90_UPI000934A2C1	tail protein X	NA
UHGV-0196880_44	eggNOG-mapper	484770.UFO1_1709	Phage Tail Protein X	NA
UHGV-0196880_44	Pfam	PF05489	Phage Tail Protein X	Phage_tail_X
UHGV-0196880_44	COG	COG5004	P2-like prophage tail protein X	NA
UHGV-0196880_44	Structural annotation	PF05489, TIGR02899, COG5004	NA	NA
UHGV-0196880_45	KOfam	K06905	NA	NA
UHGV-0196880_45	PHROG	phrog_52	tail protein	tail
UHGV-0196880_45	UniRef90	UniRef90_UPI001CD5459F	transcriptional regulator	NA
UHGV-0196880_45	eggNOG-mapper	1273103.NM10_08044	COG3500 Phage protein D	NA
UHGV-0196880_45	COG	COG3500	NA	NA
UHGV-0196880_45	Structural annotation	PF05954, NF033848, COG3500	NA	NA
UHGV-0196880_46	PHROG	phrog_6142	baseplate assembly protein	tail
UHGV-0196880_46	UniRef90	UniRef90_A0A1M6SJQ0	Phage P2 baseplate assembly protein gpV	NA
UHGV-0196880_46	eggNOG-mapper	1064535.MELS_1108	Phage baseplate assembly protein V	NA
UHGV-0196880_46	Pfam	PF18946	GpV Apex motif	Apex
UHGV-0196880_46	COG	COG4540	Phage P2 baseplate assembly protein gpV	NA
UHGV-0196880_46	Structural annotation	PF05606, MF_00216, TIGR01644, COG4540	NA	NA
UHGV-0196880_47	KOfam	K06906	NA	NA
UHGV-0196880_47	PHROG	phrog_76	tail protein	tail
UHGV-0196880_47	UniRef90	UniRef90_UPI001CD3EE4F	phage tail protein	NA
UHGV-0196880_47	eggNOG-mapper	1262914.BN533_01714	Phage P2 GpU	NA
UHGV-0196880_47	Pfam	PF06995	Phage P2 GpU	Phage_P2_GpU
UHGV-0196880_47	COG	COG3499	NA	NA
UHGV-0196880_47	Structural annotation	PF06995, TIGR01633, COG3499	NA	NA
UHGV-0196880_48	KOfam	K06903	NA	NA
UHGV-0196880_48	PHROG	phrog_43	baseplate wedge subunit	tail
UHGV-0196880_48	UniRef90	UniRef90_A0A1M6SJY0	GPW_gp25 domain-containing protein	NA
UHGV-0196880_48	eggNOG-mapper	936573.HMPREF1147_1734	GPW Gp25 family protein	NA
UHGV-0196880_48	Pfam	PF04965	Baseplate wedge protein gp25	GPW_gp25
UHGV-0196880_48	COG	COG3628	Phage baseplate assembly protein W	NA
UHGV-0196880_48	Structural annotation	PF04965, TIGR03357, COG3628	NA	NA
UHGV-0196880_49	PHROG	phrog_6	baseplate protein	tail
UHGV-0196880_49	UniRef90	UniRef90_A0A1M6SJW0	Phage-related baseplate assembly protein	NA
UHGV-0196880_49	eggNOG-mapper	1064535.MELS_1111	Baseplate J-like protein	NA
UHGV-0196880_49	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-0196880_49	COG	COG3948	Phage-related baseplate assembly protein	NA
UHGV-0196880_49	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3948	NA	NA
UHGV-0196880_50	PHROG	phrog_48	tail protein	tail
UHGV-0196880_50	UniRef90	UniRef90_UPI00073F9104	phage tail protein I	NA
UHGV-0196880_50	eggNOG-mapper	1273103.NM10_08069	Phage tail protein (Tail_P2_I)	NA
UHGV-0196880_50	Pfam	PF09684	Phage tail protein (Tail_P2_I)	Tail_P2_I
UHGV-0196880_50	NCBIFam	TIGR01634.1	phage tail protein I	NA
UHGV-0196880_50	COG	COG4385	Bacteriophage P2-related tail formation protein	NA
UHGV-0196880_50	Structural annotation	PF09684, TIGR01634, COG4385	NA	NA
UHGV-0196880_51	PHROG	phrog_7037	tail fiber protein	tail
UHGV-0196880_51	UniRef90	UniRef90_UPI0018C70641	phage tail protein	NA
UHGV-0196880_51	eggNOG-mapper	1232428.CAVO010000003_gene994	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0196880_51	Pfam	PF12571	Phage tail-collar fibre protein	DUF3751
UHGV-0196880_51	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0196880_53	KOfam	K14059	int; integrase	NA
UHGV-0196880_53	PHROG	phrog_1	integrase	integration and excision
UHGV-0196880_53	UniRef90	UniRef90_A0A1C5UD11	Tyrosine recombinase XerD	NA
UHGV-0196880_53	eggNOG-mapper	1273103.NM10_01678	Phage integrase family	NA
UHGV-0196880_53	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0196880_53	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0196880_53	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0196880_58	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0196880_58	PHROG	phrog_435	endolysin	lysis
UHGV-0196880_58	UniRef90	UniRef90_UPI00073F3E30	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0196880_58	eggNOG-mapper	1273103.NM10_01663	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0196880_58	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0196880_58	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0196880_58	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-0196880_59	PHROG	phrog_18996	NA	unknown function
UHGV-0196880_59	eggNOG-mapper	864563.HMPREF9166_1229	NA	NA
UHGV-0196880_61	PHROG	phrog_2655	excisionase	integration and excision
UHGV-0196880_61	UniRef90	UniRef90_UPI0009356454	helix-turn-helix domain-containing protein	NA
UHGV-0196880_61	eggNOG-mapper	1401067.HMPREF0872_03330	NA	NA
UHGV-0196880_61	Pfam	PF20038	Helix-turn-helix domain	HTH_59
UHGV-0196880_61	Structural annotation	PF20038, TIGR01764	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0196880	Yes	37,387 bps	43.87%	99.90%	0.9651
UHGV-0154462	No	32,720 bps	43.51%	74.07%	0.9644
UHGV-0150768	No	18,581 bps	46.57%	42.06%	0.9746
UHGV-0149603	No	10,348 bps	45.16%	23.44%	0.9769