vOTU-060503

Overview

vOTU representative UHGV-1954164

No. of genomes 7

Genome length 43,905 bps

Completeness 98.73% (high-quality)

Host Lachnospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-060503
Number of genomes	7
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 › vSUBFAM-00537 › vGENUS-01309 › vSUBGEN-31876 › vOTU-060503
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1954164
BioSample	NA
Genome length	43,905 bps
CheckV completeness	98.73% (high-quality)
CheckV contamination	0.00%
CDS count	78
CDS density	89.29%
tRNA count	2
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1954164_1	PHROG	phrog_27197	NA	unknown function
UHGV-1954164_1	eggNOG-mapper	645991.Sgly_0315	regulation of DNA-templated transcription, elongation	NA
UHGV-1954164_1	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-1954164_1	Structural annotation	NF007410	NA	NA
UHGV-1954164_4	KOfam	K06223	dam; DNA adenine methylase [EC:2.1.1.72]	NA
UHGV-1954164_4	PHROG	phrog_56	DNA methyltransferase	other
UHGV-1954164_4	UniRef90	UniRef90_UPI001C01F42B	DNA adenine methylase	NA
UHGV-1954164_4	eggNOG-mapper	411468.CLOSCI_00302	D12 class N6 adenine-specific DNA methyltransferase	NA
UHGV-1954164_4	PADLOC	MTase_II_00030	Type II methyltransferase	RM
UHGV-1954164_4	Pfam	PF02086	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
UHGV-1954164_4	COG	COG0338	DNA-adenine methylase	NA
UHGV-1954164_4	Structural annotation	PF02086, MF_01872, NF008152, COG0338	NA	NA
UHGV-1954164_5	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-1954164_5	PHROG	phrog_116	DNA methyltransferase	other
UHGV-1954164_5	UniRef90	UniRef90_R9KPX1	Cytosine-specific methyltransferase	NA
UHGV-1954164_5	eggNOG-mapper	397290.C810_00394	C-5 cytosine-specific DNA methylase	NA
UHGV-1954164_5	PADLOC	MTase_II_00058	Type II methyltransferase	RM
UHGV-1954164_5	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-1954164_5	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-1954164_5	COG	COG0270	DNA-cytosine methylase	NA
UHGV-1954164_5	Structural annotation	PF00145, TIGR00675, COG0270	NA	NA
UHGV-1954164_8	UniRef90	UniRef90_A0A1C5RYU8	Restriction alleviation protein, Lar family	NA
UHGV-1954164_8	Structural annotation	NF007260	NA	NA
UHGV-1954164_10	PHROG	phrog_874	NA	unknown function
UHGV-1954164_10	eggNOG-mapper	411468.CLOSCI_00298	NA	NA
UHGV-1954164_10	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-1954164_15	UniRef90	UniRef90_UPI001C02F342	NA	NA
UHGV-1954164_15	eggNOG-mapper	397290.C810_01514	NA	NA
UHGV-1954164_20	eggNOG-mapper	476272.RUMHYD_01751	NA	NA
UHGV-1954164_21	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-1954164_21	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-1954164_21	UniRef90	UniRef90_A0A416ZL36	Terminase small subunit	NA
UHGV-1954164_21	eggNOG-mapper	476272.RUMHYD_01754	Terminase small subunit	NA
UHGV-1954164_21	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-1954164_21	COG	COG3728	Phage terminase, small subunit	NA
UHGV-1954164_21	Structural annotation	PF03592, COG3728	NA	NA
UHGV-1954164_22	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1954164_22	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-1954164_22	UniRef90	UniRef90_A0A395X9V4	PBSX family phage terminase large subunit	NA
UHGV-1954164_22	eggNOG-mapper	397291.C804_01612	Phage terminase large subunit	NA
UHGV-1954164_22	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-1954164_22	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1954164_22	COG	COG1783	Phage terminase large subunit	NA
UHGV-1954164_22	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1954164_23	PHROG	phrog_533	portal protein	head and packaging
UHGV-1954164_23	UniRef90	UniRef90_A0A1C6CDM8	Phage portal protein, putative, A118 family	NA
UHGV-1954164_23	eggNOG-mapper	33035.JPJF01000106_gene3135	phage minor capsid protein	NA
UHGV-1954164_23	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1954164_25	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1954164_25	UniRef90	UniRef90_A0A1C6CDG2	Phage minor capsid protein 2	NA
UHGV-1954164_25	eggNOG-mapper	33035.JPJF01000106_gene3134	Phage minor capsid protein 2	NA
UHGV-1954164_25	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1954164_25	COG	COG2369	NA	NA
UHGV-1954164_25	Structural annotation	PF06152	NA	NA
UHGV-1954164_26	UniRef90	UniRef90_A0A417UWY7	CTP synthase	NA
UHGV-1954164_26	eggNOG-mapper	476272.RUMHYD_01766	NA	NA
UHGV-1954164_28	PHROG	phrog_21718	NA	unknown function
UHGV-1954164_28	eggNOG-mapper	1235790.C805_00058	NA	NA
UHGV-1954164_30	eggNOG-mapper	476272.RUMHYD_01770	NA	NA
UHGV-1954164_32	PHROG	phrog_20016	NA	unknown function
UHGV-1954164_32	UniRef90	UniRef90_A0A316MV88	BclA_C domain-containing protein	NA
UHGV-1954164_32	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-1954164_32	Structural annotation	PF18573, NF033147	NA	NA
UHGV-1954164_33	Structural annotation	PF00210, MF_01441, NF011597, COG1528	NA	NA
UHGV-1954164_35	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-1954164_35	UniRef90	UniRef90_UPI001D14C9C8	phage scaffolding protein	NA
UHGV-1954164_35	eggNOG-mapper	476272.RUMHYD_01775	COG NOG36366 non supervised orthologous group	NA
UHGV-1954164_35	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-1954164_35	Structural annotation	PF06810	NA	NA
UHGV-1954164_36	PHROG	phrog_544	major head protein	head and packaging
UHGV-1954164_36	UniRef90	UniRef90_A0A395X7A1	S-l_SbsC_C domain-containing protein	NA
UHGV-1954164_36	eggNOG-mapper	1232453.BAIF02000011_gene3359	NA	NA
UHGV-1954164_36	Pfam	PF18316	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
UHGV-1954164_36	Structural annotation	PF03864, PF18316, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1954164_37	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1954164_37	eggNOG-mapper	476272.RUMHYD_01778	NA	NA
UHGV-1954164_38	PHROG	phrog_1233	NA	unknown function
UHGV-1954164_38	eggNOG-mapper	33035.JPJF01000106_gene3130	NA	NA
UHGV-1954164_39	PHROG	phrog_1129	holin	lysis
UHGV-1954164_39	UniRef90	UniRef90_A0A417JD09	Enolase	NA
UHGV-1954164_39	eggNOG-mapper	1226322.HMPREF1545_00069	Phage holin family Hol44, in holin superfamily V	NA
UHGV-1954164_39	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-1954164_39	Structural annotation	PF06946	NA	NA
UHGV-1954164_40	PHROG	phrog_9479	NA	unknown function
UHGV-1954164_40	Structural annotation	PF15529	NA	NA
UHGV-1954164_41	PHROG	phrog_8680	NA	unknown function
UHGV-1954164_41	UniRef90	UniRef90_UPI001C0F342A	NA	NA
UHGV-1954164_41	eggNOG-mapper	411470.RUMGNA_02208	NA	NA
UHGV-1954164_41	Pfam	PF14386	NA	DUF4417
UHGV-1954164_41	Structural annotation	PF14386	NA	NA
UHGV-1954164_42	PHROG	phrog_3366	NA	unknown function
UHGV-1954164_42	eggNOG-mapper	476272.RUMHYD_01779	NA	NA
UHGV-1954164_42	Structural annotation	PF20536, COG5614	NA	NA
UHGV-1954164_43	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1954164_43	UniRef90	UniRef90_UPI0008B4CFF0	minor capsid protein	NA
UHGV-1954164_43	eggNOG-mapper	476272.RUMHYD_01780	NA	NA
UHGV-1954164_43	Structural annotation	PF11114	NA	NA
UHGV-1954164_44	PHROG	phrog_3266	tail completion	connector
UHGV-1954164_44	eggNOG-mapper	476272.RUMHYD_01781	NA	NA
UHGV-1954164_44	Structural annotation	PF12691	NA	NA
UHGV-1954164_45	PHROG	phrog_3099	NA	unknown function
UHGV-1954164_45	eggNOG-mapper	1304866.K413DRAFT_3043	NA	NA
UHGV-1954164_45	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1954164_46	PHROG	phrog_11299	NA	unknown function
UHGV-1954164_46	eggNOG-mapper	33035.JPJF01000106_gene3125	NA	NA
UHGV-1954164_46	Structural annotation	PF10666	NA	NA
UHGV-1954164_47	PHROG	phrog_706	NA	unknown function
UHGV-1954164_47	UniRef90	UniRef90_A0A173TZF2	Bacteriophage Gp15 protein	NA
UHGV-1954164_47	eggNOG-mapper	476272.RUMHYD_01784	Bacteriophage Gp15 protein	NA
UHGV-1954164_47	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-1954164_47	Structural annotation	PF06854	NA	NA
UHGV-1954164_48	PHROG	phrog_37543	NA	unknown function
UHGV-1954164_48	UniRef90	UniRef90_A0A1C5N853	Phage-related protein	NA
UHGV-1954164_48	eggNOG-mapper	411459.RUMOBE_01384	phage tail tape measure protein	NA
UHGV-1954164_48	COG	COG5412	Phage-related protein	NA
UHGV-1954164_49	PHROG	phrog_1194	NA	unknown function
UHGV-1954164_49	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-1954164_50	PHROG	phrog_6616	tail protein	tail
UHGV-1954164_50	UniRef90	UniRef90_A0A173R8I5	Peptidase S74 domain-containing protein	NA
UHGV-1954164_50	eggNOG-mapper	33035.JPJF01000043_gene1002	NA	NA
UHGV-1954164_50	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-1954164_50	Structural annotation	PF05113, NF033848, COG3500	NA	NA
UHGV-1954164_51	PHROG	phrog_25888	NA	unknown function
UHGV-1954164_51	eggNOG-mapper	33035.JPJF01000093_gene2239	NA	NA
UHGV-1954164_52	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-1954164_53	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-1954164_54	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1954164_54	PHROG	phrog_435	endolysin	lysis
UHGV-1954164_54	UniRef90	UniRef90_A0A355TJT7	MurNAc-LAA domain-containing protein	NA
UHGV-1954164_54	eggNOG-mapper	1414720.CBYM010000040_gene1663	Ami_3	NA
UHGV-1954164_54	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1954164_54	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1954164_54	Structural annotation	PF01520, PF18342, MF_00417, TIGR02883, COG0860, COG4991	NA	NA
UHGV-1954164_56	PHROG	phrog_2329	NA	unknown function
UHGV-1954164_56	UniRef90	UniRef90_A0A7C6Z4D9	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA
UHGV-1954164_56	eggNOG-mapper	1292035.H476_0264	NA	NA
UHGV-1954164_56	Structural annotation	PF04014, NF007312, COG2336	NA	NA
UHGV-1954164_58	KOfam	K14059	int; integrase	NA
UHGV-1954164_58	PHROG	phrog_1	integrase	integration and excision
UHGV-1954164_58	UniRef90	UniRef90_A0A1C6K4B6	Tyrosine recombinase XerD	NA
UHGV-1954164_58	eggNOG-mapper	742740.HMPREF9474_03478	DNA integration	NA
UHGV-1954164_58	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1954164_58	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1954164_58	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-1954164_59	KOfam	K07448	mrr; restriction system protein	NA
UHGV-1954164_59	PHROG	phrog_19856	NA	unknown function
UHGV-1954164_59	UniRef90	UniRef90_G9YP39	Ftsk gamma domain protein	NA
UHGV-1954164_59	eggNOG-mapper	658086.HMPREF0994_04914	Restriction endonuclease	NA
UHGV-1954164_59	PADLOC	ZorD1_00005	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
UHGV-1954164_59	Pfam	PF04471	Restriction endonuclease	Mrr_cat
UHGV-1954164_59	COG	COG1787	Endonuclease, HJR/Mrr/RecB family	NA
UHGV-1954164_59	Structural annotation	PF04471, NF002876, COG1787	NA	NA
UHGV-1954164_60	PHROG	phrog_87	metallo-protease	other
UHGV-1954164_60	UniRef90	UniRef90_A0A173TZ87	Metallopeptidase immA	NA
UHGV-1954164_60	eggNOG-mapper	476272.RUMHYD_01733	IrrE N-terminal-like domain	NA
UHGV-1954164_60	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-1954164_60	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-1954164_60	Structural annotation	PF06114, COG2856	NA	NA
UHGV-1954164_61	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1954164_61	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1954164_61	UniRef90	UniRef90_A0A6L9HLH6	XRE family transcriptional regulator	NA
UHGV-1954164_61	eggNOG-mapper	1304866.K413DRAFT_3003	addiction module antidote protein HigA	NA
UHGV-1954164_61	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-1954164_61	COG	COG3093	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	NA
UHGV-1954164_63	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-1954164_63	PHROG	phrog_463	anti-repressor	transcription regulation
UHGV-1954164_63	UniRef90	UniRef90_UPI001BED9A05	ORF6C domain-containing protein	NA
UHGV-1954164_63	eggNOG-mapper	596315.HMPREF0634_0237	BRO family, N-terminal domain protein	NA
UHGV-1954164_63	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-1954164_63	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-1954164_63	COG	COG3617	Prophage antirepressor	NA
UHGV-1954164_63	Structural annotation	PF10552, PF02498, TIGR02681, COG3617	NA	NA
UHGV-1954164_64	PHROG	phrog_7024	NA	unknown function
UHGV-1954164_64	eggNOG-mapper	1111454.HMPREF1250_1737	NA	NA
UHGV-1954164_64	AcrCatalog	cluster_1398	NA	NA
UHGV-1954164_65	PHROG	phrog_36464	NA	unknown function
UHGV-1954164_65	eggNOG-mapper	1235798.C817_05488	NA	NA
UHGV-1954164_65	Structural annotation	PF09035	NA	NA
UHGV-1954164_66	eggNOG-mapper	760568.Desku_0919	NA	NA
UHGV-1954164_66	Structural annotation	PF03787, TIGR02581, COG1604	NA	NA
UHGV-1954164_71	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-1954164_71	UniRef90	UniRef90_R6SKJ6	Siphovirus family protein	NA
UHGV-1954164_71	eggNOG-mapper	1410670.JHXF01000015_gene2268	Siphovirus Gp157	NA
UHGV-1954164_71	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-1954164_71	Structural annotation	PF05565	NA	NA
UHGV-1954164_72	PHROG	phrog_7838	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-1954164_72	UniRef90	UniRef90_A0A8D9UGW3	DNA repair protein RAD52-like protein	NA
UHGV-1954164_72	eggNOG-mapper	742767.HMPREF9456_02052	NA	NA
UHGV-1954164_73	PHROG	phrog_398	NA	unknown function
UHGV-1954164_73	UniRef90	UniRef90_UPI00068C968F	putative HNHc nuclease	NA
UHGV-1954164_73	eggNOG-mapper	33035.JPJF01000122_gene2462	Putative HNHc nuclease	NA
UHGV-1954164_73	Pfam	PF16784	Putative HNHc nuclease	HNHc_6
UHGV-1954164_73	Structural annotation	PF16784	NA	NA
UHGV-1954164_75	PHROG	phrog_244	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1954164_75	eggNOG-mapper	33035.JPJF01000122_gene2460	NA	NA
UHGV-1954164_75	Structural annotation	PF01870, MF_01490, NF040854, COG1591	NA	NA
UHGV-1954164_76	PHROG	phrog_428	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1954164_76	UniRef90	UniRef90_UPI000BE3968F	conserved phage C-terminal domain-containing protein	NA
UHGV-1954164_76	eggNOG-mapper	1304866.K413DRAFT_1200	Conserved phage C-terminus (Phg_2220_C)	NA
UHGV-1954164_76	Pfam	PF19808	NA	DUF6291
UHGV-1954164_76	Pfam	PF09524	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
UHGV-1954164_76	NCBIFam	TIGR02220.1	phage conserved hypothetical protein, C-terminal domain	NA
UHGV-1954164_76	COG	COG1846	DNA-binding transcriptional regulator, MarR family	NA
UHGV-1954164_76	Structural annotation	PF19808	NA	NA
UHGV-1954164_78	PHROG	phrog_4433	NA	unknown function
UHGV-1954164_78	UniRef90	UniRef90_A0A6M5C839	Putative ADP-ribosyltransferase	NA
UHGV-1954164_78	eggNOG-mapper	33035.JPJF01000122_gene2458	regulation of DNA-templated transcription, elongation	NA
UHGV-1954164_78	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-1954164_78	Structural annotation	PF12120, NF000066	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1954164	Yes	43,905 bps	45.05%	98.73%	0.9811
UHGV-1458843	No	43,892 bps	45.05%	98.70%	0.9819
UHGV-1423342	No	32,784 bps	44.87%	73.29%	0.9798
UHGV-2228409	No	30,815 bps	44.80%	68.90%	0.9825
UHGV-1461786	No	23,867 bps	45.82%	53.80%	0.9819
UHGV-0212721	No	13,841 bps	46.12%	30.77%	0.9825
UHGV-1936072	No	11,884 bps	45.69%	25.02%	0.9825