vOTU-060699

Overview

vOTU representative UHGV-0205545

No. of genomes 7

Genome length 35,552 bps

Completeness 97.57% (high-quality)

Host CAG-115 sp003531585

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-060699
Number of genomes	7
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-02387 › vGENUS-09562 › vSUBGEN-11428 › vOTU-060699
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › CAG-115 › CAG-115 sp003531585
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0205545
BioSample	SAMN00036912
Genome length	35,552 bps
CheckV completeness	97.57% (high-quality)
CheckV contamination	0.00%
CDS count	46
CDS density	88.03%
tRNA count	2
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0205545_1	UniRef90	UniRef90_S3LCA8	NA	NA
UHGV-0205545_1	eggNOG-mapper	545695.TREAZ_0266	hmm pf01609	NA
UHGV-0205545_1	COG	COG3039	Transposase and inactivated derivatives, IS5 family	NA
UHGV-0205545_2	UniRef90	UniRef90_A0A374EL00	IS3 family transposase (Fragment)	NA
UHGV-0205545_2	eggNOG-mapper	411473.RUMCAL_00535	NA	NA
UHGV-0205545_2	COG	COG2801	Transposase InsO and inactivated derivatives	NA
UHGV-0205545_3	KOfam	K14059	int; integrase	NA
UHGV-0205545_3	PHROG	phrog_1	integrase	integration and excision
UHGV-0205545_3	UniRef90	UniRef90_A0A3D4L580	Tyr recombinase domain-containing protein	NA
UHGV-0205545_3	eggNOG-mapper	1392502.JNIO01000002_gene105	Belongs to the 'phage' integrase family	NA
UHGV-0205545_3	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0205545_3	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0205545_3	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0205545_4	KOfam	K07504	K07504; predicted type IV restriction endonuclease	NA
UHGV-0205545_4	PHROG	phrog_4225	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0205545_4	UniRef90	UniRef90_A0A1V5GNA2	HSDR_N_2 domain-containing protein	NA
UHGV-0205545_4	eggNOG-mapper	1235798.C817_04755	Type I restriction enzyme R protein N terminus (HSDR_N)	NA
UHGV-0205545_4	Pfam	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)	HSDR_N
UHGV-0205545_4	COG	COG4748	NA	NA
UHGV-0205545_4	Structural annotation	PF13588, TIGR04256, COG4748	NA	NA
UHGV-0205545_6	PHROG	phrog_1914	NA	unknown function
UHGV-0205545_6	UniRef90	UniRef90_W0U704	Peptidase_M78 domain-containing protein	NA
UHGV-0205545_6	eggNOG-mapper	1160721.RBI_I01604	NA	NA
UHGV-0205545_6	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0205545_6	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0205545_6	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0205545_7	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0205545_7	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0205545_7	UniRef90	UniRef90_C0DAM1	DNA-binding helix-turn-helix protein	NA
UHGV-0205545_7	eggNOG-mapper	706434.HMPREF9429_00594	Helix-turn-helix XRE-family like proteins	NA
UHGV-0205545_7	PADLOC	Control_protein_00002	control protein	RM
UHGV-0205545_7	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0205545_7	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0205545_7	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0205545_8	UniRef90	UniRef90_A0A396NP63	NA	NA
UHGV-0205545_8	eggNOG-mapper	887929.HMP0721_1290	Helix-turn-helix domain of resolvase	NA
UHGV-0205545_8	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0205545_8	Structural annotation	PF05339, NF041951, COG3655	NA	NA
UHGV-0205545_11	PHROG	phrog_38338	NA	unknown function
UHGV-0205545_11	UniRef90	UniRef90_UPI00137B3A8C	Cas9 inhibitor AcrIIA9 family protein	NA
UHGV-0205545_11	eggNOG-mapper	1514668.JOOA01000001_gene227	NA	NA
UHGV-0205545_12	PHROG	phrog_8470	NA	unknown function
UHGV-0205545_12	UniRef90	UniRef90_UPI0019175B9C	PcfJ domain-containing protein	NA
UHGV-0205545_12	eggNOG-mapper	641112.ACOK01000073_gene2870	PcfJ-like protein	NA
UHGV-0205545_12	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-0205545_12	Structural annotation	PF14284	NA	NA
UHGV-0205545_13	PHROG	phrog_15609	NA	unknown function
UHGV-0205545_13	UniRef90	UniRef90_A0A373SLQ6	NA	NA
UHGV-0205545_13	eggNOG-mapper	641112.ACOK01000073_gene2872	NA	NA
UHGV-0205545_13	Structural annotation	PF11300, NF033725	NA	NA
UHGV-0205545_14	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0205545_14	UniRef90	UniRef90_UPI00189A2233	siphovirus Gp157 family protein	NA
UHGV-0205545_14	eggNOG-mapper	447909.A6M981_9VIRU	Siphovirus Gp157	NA
UHGV-0205545_14	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0205545_14	Structural annotation	PF05565	NA	NA
UHGV-0205545_15	PHROG	phrog_2872	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0205545_15	UniRef90	UniRef90_UPI001A9B3ECC	AAA family ATPase	NA
UHGV-0205545_15	eggNOG-mapper	754027.HMPREF9554_00709	NA	NA
UHGV-0205545_15	Pfam	PF13479	AAA domain	AAA_24
UHGV-0205545_15	Structural annotation	PF13479, MF_00350, TIGR01618, COG0468	NA	NA
UHGV-0205545_16	KOfam	K19789	radD; DNA repair protein RadD	NA
UHGV-0205545_16	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0205545_16	UniRef90	UniRef90_R6RJE0	DNA or RNA helicases of superfamily II	NA
UHGV-0205545_16	eggNOG-mapper	1410670.JHXF01000015_gene2270	helicase	NA
UHGV-0205545_16	PADLOC	mREase_IV_00005	Type IV methyl-directed restriction enzyme	RM
UHGV-0205545_16	Pfam	PF04851	Type III restriction enzyme, res subunit	ResIII
UHGV-0205545_16	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-0205545_16	COG	COG1061	Superfamily II DNA or RNA helicase	NA
UHGV-0205545_16	Structural annotation	PF04851, PF00271, MF_01489, TIGR04095, COG1061	NA	NA
UHGV-0205545_17	PHROG	phrog_378	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0205545_17	UniRef90	UniRef90_UPI0019172865	NA	NA
UHGV-0205545_17	eggNOG-mapper	1347392.CCEZ01000005_gene1216	NA	NA
UHGV-0205545_17	Pfam	PF05037	NA	DUF669
UHGV-0205545_17	Structural annotation	PF05037, NF004948	NA	NA
UHGV-0205545_18	KOfam	K06919	K06919; putative DNA primase/helicase	NA
UHGV-0205545_18	PHROG	phrog_1829	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-0205545_18	UniRef90	UniRef90_A0A356CZ91	DNA primase	NA
UHGV-0205545_18	eggNOG-mapper	1410670.JHXF01000015_gene2274	Phage plasmid primase, P4 family	NA
UHGV-0205545_18	Pfam	PF08706	D5 N terminal like	D5_N
UHGV-0205545_18	Pfam	PF19263	NA	DUF5906
UHGV-0205545_18	Pfam	PF03288	Poxvirus D5 protein-like	Pox_D5
UHGV-0205545_18	NCBIFam	TIGR01613.1	phage/plasmid primase, P4 family	NA
UHGV-0205545_18	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-0205545_18	Structural annotation	PF08706, PF05272, PF02257, MF_04000, NF011296, COG3378, COG4983	NA	NA
UHGV-0205545_22	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-0205545_22	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0205545_22	NCBIFam	TIGR03655.1	Lar family restriction alleviation protein	NA
UHGV-0205545_22	Structural annotation	PF14354, TIGR03655	NA	NA
UHGV-0205545_23	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0205545_23	UniRef90	UniRef90_R5GVZ3	Sigma70_r4 domain-containing protein	NA
UHGV-0205545_23	eggNOG-mapper	203119.Cthe_1732	sigma factor activity	NA
UHGV-0205545_23	Pfam	PF07374	NA	DUF1492
UHGV-0205545_23	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0205545_23	Structural annotation	PF07374, MF_00674, NF008895, COG1191	NA	NA
UHGV-0205545_24	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0205545_24	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0205545_24	UniRef90	UniRef90_A0A1H3YVJ7	Phage terminase small subunit	NA
UHGV-0205545_24	eggNOG-mapper	608534.GCWU000341_02298	Terminase small subunit	NA
UHGV-0205545_24	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0205545_24	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0205545_24	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0205545_25	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0205545_25	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0205545_25	UniRef90	UniRef90_A0A174ZXT9	Phage terminase, large subunit, PBSX family	NA
UHGV-0205545_25	eggNOG-mapper	246194.CHY_1680	Terminase RNAseH like domain	NA
UHGV-0205545_25	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0205545_25	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0205545_25	COG	COG1783	Phage terminase large subunit	NA
UHGV-0205545_25	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0205545_26	PHROG	phrog_64	portal protein	head and packaging
UHGV-0205545_26	UniRef90	UniRef90_UPI00122F6315	phage portal protein	NA
UHGV-0205545_26	eggNOG-mapper	1504823.CCMM01000008_gene1047	Phage portal protein, SPP1 family	NA
UHGV-0205545_26	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0205545_26	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-0205545_26	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0205545_27	PHROG	phrog_2841	minor head protein	head and packaging
UHGV-0205545_27	UniRef90	UniRef90_A0A133ZGG0	Phage protein F-like protein	NA
UHGV-0205545_27	eggNOG-mapper	742733.HMPREF9469_01825	Phage head morphogenesis protein, SPP1 gp7 family	NA
UHGV-0205545_27	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0205545_27	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0205545_27	COG	COG2369	NA	NA
UHGV-0205545_27	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0205545_29	PHROG	phrog_21498	NA	unknown function
UHGV-0205545_29	UniRef90	UniRef90_R6E8L3	ParB-like nuclease	NA
UHGV-0205545_29	eggNOG-mapper	469378.Ccur_02830	DNA binding	NA
UHGV-0205545_29	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0205545_29	Structural annotation	PF05869, TIGR01712	NA	NA
UHGV-0205545_30	PHROG	phrog_172	head scaffolding protein	head and packaging
UHGV-0205545_30	eggNOG-mapper	1211844.CBLM010000016_gene1492	NA	NA
UHGV-0205545_30	Pfam	PF14265	NA	DUF4355
UHGV-0205545_30	Structural annotation	PF14265	NA	NA
UHGV-0205545_31	PHROG	phrog_422	major head protein	head and packaging
UHGV-0205545_31	UniRef90	UniRef90_R6RKD0	Gp7	NA
UHGV-0205545_31	eggNOG-mapper	755731.Clo1100_2434	NA	NA
UHGV-0205545_31	Structural annotation	PF19821, MF_04119, TIGR04387, COG1659	NA	NA
UHGV-0205545_32	PHROG	phrog_132	head-tail adaptor	connector
UHGV-0205545_32	UniRef90	UniRef90_A0A175A0L9	Phage gp6-like head-tail connector protein	NA
UHGV-0205545_32	eggNOG-mapper	1499683.CCFF01000014_gene3907	Phage gp6-like head-tail connector protein	NA
UHGV-0205545_32	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0205545_32	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0205545_33	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0205545_33	UniRef90	UniRef90_UPI00122EE3AF	HK97 gp10 family phage protein	NA
UHGV-0205545_33	eggNOG-mapper	1540257.JQMW01000009_gene3375	NA	NA
UHGV-0205545_33	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0205545_33	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0205545_33	Structural annotation	PF06763, TIGR01725, COG5005	NA	NA
UHGV-0205545_34	Structural annotation	PF05657	NA	NA
UHGV-0205545_35	PHROG	phrog_158	major tail protein	tail
UHGV-0205545_35	UniRef90	UniRef90_UPI000B4AA6D0	phage tail protein	NA
UHGV-0205545_35	eggNOG-mapper	1158607.UAU_01767	Phage tail tube protein, TTP	NA
UHGV-0205545_35	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-0205545_37	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-0205545_37	eggNOG-mapper	1215915.BN193_09055	phage tail tape measure protein	NA
UHGV-0205545_37	COG	COG5185	Chromosome segregation protein NDC80, interacts with SMC proteins	NA
UHGV-0205545_39	PHROG	phrog_1194	NA	unknown function
UHGV-0205545_39	eggNOG-mapper	243164.DET1077	NA	NA
UHGV-0205545_39	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-0205545_40	PHROG	phrog_23052	NA	unknown function
UHGV-0205545_40	eggNOG-mapper	1235802.C823_01534	NA	NA
UHGV-0205545_40	Structural annotation	PF05113, NF033848, COG3500	NA	NA
UHGV-0205545_41	PHROG	phrog_4492	tail fiber protein	tail
UHGV-0205545_41	eggNOG-mapper	756499.Desde_1105	NA	NA
UHGV-0205545_41	Structural annotation	PF21621, PF21253, MF_01537, NF007875, COG3123	NA	NA
UHGV-0205545_43	PHROG	phrog_4105	NA	unknown function
UHGV-0205545_43	eggNOG-mapper	33035.JPJF01000043_gene996	NA	NA
UHGV-0205545_44	PHROG	phrog_1048	NA	unknown function
UHGV-0205545_44	UniRef90	UniRef90_A0A3C0QMQ1	NA	NA
UHGV-0205545_44	eggNOG-mapper	411473.RUMCAL_01927	NA	NA
UHGV-0205545_44	Pfam	PF11195	NA	DUF2829
UHGV-0205545_44	dbAPIS	APIS029	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	NA
UHGV-0205545_44	Structural annotation	PF11195	NA	NA
UHGV-0205545_45	eggNOG-mapper	411470.RUMGNA_00254	NA	NA
UHGV-0205545_46	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0205545_46	PHROG	phrog_15001	endolysin	lysis
UHGV-0205545_46	UniRef90	UniRef90_R5H0D9	N-acetylmuramoyl-L-alanine amidase domain protein	NA
UHGV-0205545_46	eggNOG-mapper	1235835.C814_01292	Ami_2	NA
UHGV-0205545_46	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0205545_46	COG	COG1388	LysM repeat	NA
UHGV-0205545_46	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0205545	Yes	35,552 bps	54.66%	97.57%	0.9796
UHGV-1518660	No	32,665 bps	55.39%	89.65%	0.9802
UHGV-0353616	No	23,748 bps	55.95%	58.69%	0.9812
UHGV-0169706	No	22,519 bps	55.45%	55.58%	0.9807
UHGV-1460988	No	22,519 bps	55.45%	55.58%	0.9807
UHGV-0169704	No	12,691 bps	54.26%	34.98%	0.9769
UHGV-1621642	No	10,351 bps	56.52%	25.26%	0.9816