vOTU-060871

Overview

No. of genomes 14

Genome length 44,436 bps

Completeness 99.90% (high-quality)

Host Bifidobacterium adolescentis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-060871
Number of genomes	14
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00024 › vSUBFAM-00277 › vGENUS-00241 › vSUBGEN-04738 › vOTU-060871
Host taxonomy	Bacteria › Actinobacteriota › Actinomycetia › Actinomycetales › Bifidobacteriaceae › Bifidobacterium › Bifidobacterium adolescentis
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0149556
BioSample	SAMN05414913
Genome length	44,436 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	56
CDS density	92.64%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0149556_1	KOfam	K14059	int; integrase	NA
UHGV-0149556_1	PHROG	phrog_1	integrase	integration and excision
UHGV-0149556_1	UniRef90	UniRef90_A0A0H3ECF6	Integrase/recombinase	NA
UHGV-0149556_1	eggNOG-mapper	566552.BIFCAT_00908	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0149556_1	Pfam	PF13102	Phage integrase SAM-like domain	Phage_int_SAM_5
UHGV-0149556_1	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0149556_1	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0149556_1	Structural annotation	PF00589, PF02920, MF_01808, TIGR02224, COG4974, COG3422	NA	NA
UHGV-0149556_2	PHROG	phrog_2439	transcriptional regulator	transcription regulation
UHGV-0149556_2	UniRef90	UniRef90_K2M212	Peptidase_M78 domain-containing protein	NA
UHGV-0149556_2	eggNOG-mapper	1341695.BBOMB_1075	IrrE N-terminal-like domain	NA
UHGV-0149556_2	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0149556_2	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0149556_2	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0149556_3	eggNOG-mapper	1193128.A200_00080	NA	NA
UHGV-0149556_4	eggNOG-mapper	1435051.BMOU_0749	NA	NA
UHGV-0149556_5	PHROG	phrog_11491	NA	unknown function
UHGV-0149556_5	UniRef90	UniRef90_UPI0009BD580B	NA	NA
UHGV-0149556_5	eggNOG-mapper	1435051.BMOU_0267	NA	NA
UHGV-0149556_6	PHROG	phrog_87	metallo-protease	other
UHGV-0149556_6	UniRef90	UniRef90_UPI001E4081C5	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-0149556_6	eggNOG-mapper	398513.BBNG_00813	NA	NA
UHGV-0149556_6	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0149556_6	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0149556_7	KOfam	K06921	NA	NA
UHGV-0149556_7	PHROG	phrog_6841	NA	unknown function
UHGV-0149556_7	UniRef90	UniRef90_UPI0018DBFFC6	ATP-binding protein	NA
UHGV-0149556_7	eggNOG-mapper	762211.BSTEL_0666	AAA ATPase domain	NA
UHGV-0149556_7	Pfam	PF13191	AAA ATPase domain	AAA_16
UHGV-0149556_7	COG	COG1672	Predicted ATPase, archaeal AAA+ ATPase superfamily	NA
UHGV-0149556_7	Structural annotation	PF20703, MF_01407, NF001624, COG1474	NA	NA
UHGV-0149556_8	UniRef90	UniRef90_UPI000D5643C3	XRE family transcriptional regulator	NA
UHGV-0149556_8	eggNOG-mapper	702459.BBPR_0880	NA	NA
UHGV-0149556_8	Structural annotation	PF13560, MF_00535, NF041677, COG3655	NA	NA
UHGV-0149556_9	Structural annotation	PF13443, NF041677, COG1513	NA	NA
UHGV-0149556_11	eggNOG-mapper	702459.BBPR_0882	NA	NA
UHGV-0149556_11	Structural annotation	PF17224, NF009452, COG5456	NA	NA
UHGV-0149556_12	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0149556_12	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0149556_12	UniRef90	UniRef90_A0A0H3ECH0	Phage antirepressor protein	NA
UHGV-0149556_12	eggNOG-mapper	702459.BBPR_0883	BRO family, N-terminal domain	NA
UHGV-0149556_12	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0149556_12	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0149556_12	COG	COG3617	Prophage antirepressor	NA
UHGV-0149556_12	Structural annotation	PF03374, PF02498, TIGR02681, COG3645	NA	NA
UHGV-0149556_13	Structural annotation	PF11305, MF_01360, NF010236	NA	NA
UHGV-0149556_14	UniRef90	UniRef90_A0A1X2ZMI0	DNA-binding protein	NA
UHGV-0149556_14	eggNOG-mapper	566552.BIFCAT_00891	NA	NA
UHGV-0149556_17	eggNOG-mapper	702459.BBPR_0888	NA	NA
UHGV-0149556_19	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0149556_19	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0149556_19	UniRef90	UniRef90_A0A8B2ZLB0	Single-stranded DNA-binding protein	NA
UHGV-0149556_19	eggNOG-mapper	398513.BBNG_00826	Single-strand binding protein family	NA
UHGV-0149556_19	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0149556_19	NCBIFam	NF005851.0	single-stranded DNA-binding protein	NA
UHGV-0149556_19	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0149556_19	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0149556_19	Structural annotation	PF00436, MF_00984, NF005851, COG2965	NA	NA
UHGV-0149556_20	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0149556_20	PHROG	phrog_6218	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0149556_20	UniRef90	UniRef90_UPI001899002D	ParB/RepB/Spo0J family partition protein	NA
UHGV-0149556_20	eggNOG-mapper	398513.BBNG_00827	ParB-like nuclease domain	NA
UHGV-0149556_20	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0149556_20	NCBIFam	TIGR00180.1	ParB/RepB/Spo0J family partition protein	NA
UHGV-0149556_20	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0149556_20	Structural annotation	PF02195, PF18579, MF_02015, TIGR00180, COG1475	NA	NA
UHGV-0149556_21	PHROG	phrog_1032	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0149556_21	UniRef90	UniRef90_A0A6A2RLX9	Helix-turn-helix domain-containing protein	NA
UHGV-0149556_21	eggNOG-mapper	566552.BIFCAT_00887	Transcriptional regulator	NA
UHGV-0149556_21	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0149556_21	COG	COG0640	DNA-binding transcriptional regulator, ArsR family	NA
UHGV-0149556_21	Structural annotation	PF01978, TIGR01610, COG5529	NA	NA
UHGV-0149556_22	eggNOG-mapper	566552.BIFCAT_00886	NA	NA
UHGV-0149556_23	PHROG	phrog_740	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0149556_23	UniRef90	UniRef90_A0A0B5BGU1	Restriction endonuclease	NA
UHGV-0149556_23	eggNOG-mapper	566552.BIFCAT_00885	HNH endonuclease	NA
UHGV-0149556_23	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0149556_24	KOfam	K13288	orn, REX2, REXO2; oligoribonuclease [EC:3.1.-.-]	NA
UHGV-0149556_24	PHROG	phrog_192	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UHGV-0149556_24	UniRef90	UniRef90_A0A1V8QC54	Oligoribonuclease	NA
UHGV-0149556_24	eggNOG-mapper	566552.BIFCAT_00884	3'-to-5' exoribonuclease specific for small oligoribonucleotides	NA
UHGV-0149556_24	COG	COG1949	Oligoribonuclease (3'-5' exoribonuclease)	NA
UHGV-0149556_24	Structural annotation	PF00929, MF_00045, NF003765, COG1949	NA	NA
UHGV-0149556_25	Structural annotation	PF07073	NA	NA
UHGV-0149556_27	PHROG	phrog_3641	NA	unknown function
UHGV-0149556_27	eggNOG-mapper	398513.BBNG_00833	NA	NA
UHGV-0149556_29	UniRef90	UniRef90_A0A3D1TL16	Antitoxin	NA
UHGV-0149556_29	eggNOG-mapper	566552.BIFCAT_00880	NA	NA
UHGV-0149556_29	Structural annotation	PF04218	NA	NA
UHGV-0149556_30	PHROG	phrog_908	NA	unknown function
UHGV-0149556_30	UniRef90	UniRef90_UPI0011C4776F	helix-turn-helix domain-containing protein	NA
UHGV-0149556_30	eggNOG-mapper	566552.BIFCAT_00879	tRNA 5'-leader removal	NA
UHGV-0149556_30	COG	COG2023	Ribonuclease P protein subunit RPR2	NA
UHGV-0149556_30	Structural annotation	COG0789	NA	NA
UHGV-0149556_31	PHROG	phrog_597	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0149556_31	UniRef90	UniRef90_A0A1X2ZMQ9	G28 phagic protein	NA
UHGV-0149556_31	eggNOG-mapper	1680.BADO_1215	Transcriptional regulator	NA
UHGV-0149556_31	COG	COG3311	DNA-binding transcriptional regulator AlpA	NA
UHGV-0149556_31	Structural annotation	PF12728, NF033499, COG3311	NA	NA
UHGV-0149556_32	COG	COG1268	Biotin transporter BioY	NA
UHGV-0149556_34	eggNOG-mapper	158787.BSCA_1012	NA	NA
UHGV-0149556_35	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0149556_35	UniRef90	UniRef90_A0A1X3A9X3	Terminase	NA
UHGV-0149556_35	eggNOG-mapper	158787.BSCA_1010	Phage terminase, small subunit	NA
UHGV-0149556_35	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0149556_35	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-0149556_35	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0149556_35	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0149556_36	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0149556_36	UniRef90	UniRef90_W4NAK9	Terminase	NA
UHGV-0149556_36	eggNOG-mapper	1435051.BMOU_0780	Phage Terminase	NA
UHGV-0149556_36	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0149556_36	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0149556_36	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0149556_36	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0149556_38	PHROG	phrog_12	portal protein	head and packaging
UHGV-0149556_38	UniRef90	UniRef90_A0A1X3AA46	PE-PGRS family protein	NA
UHGV-0149556_38	eggNOG-mapper	1435051.BMOU_0778	Phage portal protein	NA
UHGV-0149556_38	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0149556_38	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0149556_38	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0149556_39	KOfam	K06904	NA	NA
UHGV-0149556_39	PHROG	phrog_10	major head protein	head and packaging
UHGV-0149556_39	UniRef90	UniRef90_A0A6A2RR94	HK97 family phage prohead protease	NA
UHGV-0149556_39	eggNOG-mapper	1435051.BMOU_0777	Phage capsid family	NA
UHGV-0149556_39	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0149556_39	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0149556_39	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0149556_39	COG	COG3740	Phage head maturation protease	NA
UHGV-0149556_40	PHROG	phrog_442	head-tail adaptor	connector
UHGV-0149556_40	UniRef90	UniRef90_A0A1X2ZNE2	Mobile element protein	NA
UHGV-0149556_40	eggNOG-mapper	1435051.BMOU_0776	NA	NA
UHGV-0149556_40	Structural annotation	TIGR02215	NA	NA
UHGV-0149556_41	eggNOG-mapper	1435051.BMOU_0775	NA	NA
UHGV-0149556_42	eggNOG-mapper	1435051.BMOU_0774	NA	NA
UHGV-0149556_42	Structural annotation	PF17395, TIGR01725	NA	NA
UHGV-0149556_43	eggNOG-mapper	1435051.BMOU_0773	NA	NA
UHGV-0149556_43	Structural annotation	PF16807, NF040576, COG3167	NA	NA
UHGV-0149556_44	PHROG	phrog_476	major tail protein	tail
UHGV-0149556_44	UniRef90	UniRef90_A0A087DI33	Major tail subunit	NA
UHGV-0149556_44	eggNOG-mapper	1435051.BMOU_0772	NA	NA
UHGV-0149556_44	Structural annotation	PF09393, TIGR01603, COG3498	NA	NA
UHGV-0149556_45	PHROG	phrog_5010	tail assembly chaperone	tail
UHGV-0149556_45	eggNOG-mapper	566552.BIFCAT_00864	NA	NA
UHGV-0149556_46	eggNOG-mapper	1435051.BMOU_0770	NA	NA
UHGV-0149556_47	PHROG	phrog_5448	tail length tape measure protein	tail
UHGV-0149556_47	UniRef90	UniRef90_A0A1X3A9R3	Cell surface protein	NA
UHGV-0149556_47	eggNOG-mapper	566552.BIFCAT_00862	Transglycosylase SLT domain	NA
UHGV-0149556_47	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0149556_47	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-0149556_47	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0149556_47	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0149556_47	Structural annotation	PF20155, PF09486, TIGR02971, COG3953, COG3941, COG1579	NA	NA
UHGV-0149556_48	PHROG	phrog_5577	minor tail protein	tail
UHGV-0149556_48	UniRef90	UniRef90_W4N9I3	Phage tail domain protein	NA
UHGV-0149556_48	eggNOG-mapper	566552.BIFCAT_00861	NA	NA
UHGV-0149556_48	Structural annotation	PF20753, PF16774, TIGR01633, COG4722	NA	NA
UHGV-0149556_49	PHROG	phrog_3398	virion structural protein	head and packaging
UHGV-0149556_49	UniRef90	UniRef90_A0A087B698	Putative phage protein gp45	NA
UHGV-0149556_49	eggNOG-mapper	35760.BCHO_0829	NA	NA
UHGV-0149556_49	Structural annotation	PF05475, NF033147, COG4935	NA	NA
UHGV-0149556_50	PHROG	phrog_1885	minor tail protein	tail
UHGV-0149556_50	UniRef90	UniRef90_A0A087B699	Putative major tail protein	NA
UHGV-0149556_50	eggNOG-mapper	1688.BCUN_1860	NA	NA
UHGV-0149556_50	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-0149556_51	KOfam	K10421	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	NA
UHGV-0149556_51	PHROG	phrog_1775	minor head protein	head and packaging
UHGV-0149556_51	UniRef90	UniRef90_A0A1X2ZMQ5	Autotransporter adhesin	NA
UHGV-0149556_51	eggNOG-mapper	566552.BIFCAT_00858	nuclear chromosome segregation	NA
UHGV-0149556_51	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0149556_52	eggNOG-mapper	566552.BIFCAT_00857	NA	NA
UHGV-0149556_53	PHROG	phrog_1397	NA	unknown function
UHGV-0149556_53	UniRef90	UniRef90_A0A1X2ZMT4	PRTRC system protein E	NA
UHGV-0149556_53	eggNOG-mapper	78345.BMERY_0865	NA	NA
UHGV-0149556_54	PHROG	phrog_263	holin	lysis
UHGV-0149556_54	UniRef90	UniRef90_A0A1X2ZML3	Holin, SPP1 family	NA
UHGV-0149556_54	eggNOG-mapper	566552.BIFCAT_00852	SPP1 phage holin	NA
UHGV-0149556_54	Pfam	PF04688	SPP1 phage holin	Holin_SPP1
UHGV-0149556_55	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0149556_55	PHROG	phrog_19265	NA	unknown function
UHGV-0149556_55	UniRef90	UniRef90_A0A1X2ZMX0	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0149556_55	eggNOG-mapper	566552.BIFCAT_00851	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0149556_55	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0149556_55	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-0149556_55	Structural annotation	PF01510, MF_04111, NF008758, COG3023	NA	NA
UHGV-0149556_56	KOfam	K00549	metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]	NA
UHGV-0149556_56	PHROG	phrog_25791	NA	unknown function
UHGV-0149556_56	UniRef90	UniRef90_A1A1F4	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase	NA
UHGV-0149556_56	eggNOG-mapper	1680.BADO_0804	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation	NA
UHGV-0149556_56	Pfam	PF08267	Cobalamin-independent synthase, N-terminal domain	Meth_synt_1
UHGV-0149556_56	Pfam	PF01717	Cobalamin-independent synthase, Catalytic domain	Meth_synt_2
UHGV-0149556_56	NCBIFam	NF003556.0	5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	NA
UHGV-0149556_56	COG	COG0620	Methionine synthase II (cobalamin-independent)	NA
UHGV-0149556_56	HAMAP	MF_00172	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0149556	Yes	44,436 bps	59.75%	99.90%	0.9785
UHGV-1524406	No	28,523 bps	59.71%	52.20%	0.9823
UHGV-1542754	No	28,270 bps	59.97%	52.05%	0.9817
UHGV-1700951	No	19,983 bps	60.22%	45.95%	0.9822
UHGV-1679136	No	17,788 bps	60.13%	42.32%	0.9824
UHGV-1838116	No	21,924 bps	60.21%	40.20%	0.9810
UHGV-1838180	No	21,247 bps	60.14%	39.61%	0.9805
UHGV-1727906	No	21,508 bps	59.58%	39.45%	0.9816
UHGV-1203343	No	15,926 bps	60.47%	36.62%	0.9806
UHGV-2202892	No	13,051 bps	59.08%	29.90%	0.9813
UHGV-1593349	No	11,739 bps	60.30%	26.99%	0.9822
UHGV-1217261	No	11,515 bps	59.62%	26.36%	0.9810
UHGV-1166016	No	10,309 bps	59.99%	23.54%	0.9813
UHGV-1859802	No	11,539 bps	61.14%	18.52%	0.9823