vOTU-060975

Overview

vOTU representative UHGV-1941403

No. of genomes 5

Genome length 48,928 bps

Completeness 98.16% (high-quality)

Host Dysosmobacter welbionis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-060975
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-06073 › vGENUS-14597 › vSUBGEN-24672 › vOTU-060975
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › Dysosmobacter › Dysosmobacter welbionis
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-1941403
BioSample	NA
Genome length	48,928 bps
CheckV completeness	98.16% (high-quality)
CheckV contamination	0.00%
CDS count	82
CDS density	87.58%
tRNA count	1
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1941403_1	PHROG	phrog_3279	tail fiber protein	tail
UHGV-1941403_1	eggNOG-mapper	1235797.C816_04177	alginic acid biosynthetic process	NA
UHGV-1941403_1	COG	COG1511	NA	NA
UHGV-1941403_4	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1941403_4	PHROG	phrog_435	endolysin	lysis
UHGV-1941403_4	UniRef90	UniRef90_A0A6A8VJA4	MurNAc-LAA domain-containing protein	NA
UHGV-1941403_4	eggNOG-mapper	1121344.JHZO01000003_gene744	Ami_3	NA
UHGV-1941403_4	Pfam	PF09992	Phosphodiester glycosidase	NAGPA
UHGV-1941403_4	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1941403_4	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1941403_4	Structural annotation	PF01520, PF09992, MF_00417, TIGR02883, COG0860, COG4632	NA	NA
UHGV-1941403_5	PHROG	phrog_1384	Mom-like DNA modification protein	other
UHGV-1941403_5	UniRef90	UniRef90_A0A516MDE6	Putative adenine modification enzyme	NA
UHGV-1941403_5	eggNOG-mapper	411490.ANACAC_02385	COG NOG12663 non supervised orthologous group	NA
UHGV-1941403_5	Structural annotation	PF14236, MF_02210, NF007025, COG1247	NA	NA
UHGV-1941403_6	PHROG	phrog_1129	holin	lysis
UHGV-1941403_6	UniRef90	UniRef90_A0A6A8VHY5	Enolase	NA
UHGV-1941403_6	eggNOG-mapper	1226322.HMPREF1545_00069	Phage holin family Hol44, in holin superfamily V	NA
UHGV-1941403_6	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-1941403_6	Structural annotation	PF06946	NA	NA
UHGV-1941403_7	PHROG	phrog_4105	NA	unknown function
UHGV-1941403_7	eggNOG-mapper	33035.JPJF01000043_gene996	NA	NA
UHGV-1941403_13	PHROG	phrog_13890	NA	unknown function
UHGV-1941403_13	UniRef90	UniRef90_UPI0013680835	Arc family DNA-binding protein	NA
UHGV-1941403_13	Pfam	PF03869	Arc-like DNA binding domain	Arc
UHGV-1941403_13	Structural annotation	PF03869, NF010256	NA	NA
UHGV-1941403_14	PHROG	phrog_21094	NA	unknown function
UHGV-1941403_14	UniRef90	UniRef90_E4Q765	Putative Lj965 prophage protein	NA
UHGV-1941403_14	eggNOG-mapper	198467.NP92_02665	NA	NA
UHGV-1941403_15	PHROG	phrog_5059	NA	unknown function
UHGV-1941403_15	UniRef90	UniRef90_A0A3A4ZBK8	NA	NA
UHGV-1941403_15	eggNOG-mapper	717606.PaecuDRAFT_2356	NA	NA
UHGV-1941403_15	Pfam	PF08861	NA	DUF1828
UHGV-1941403_15	Pfam	PF08862	NA	DUF1829
UHGV-1941403_15	Structural annotation	PF08862, PF08861, MF_00722, COG3372	NA	NA
UHGV-1941403_18	KOfam	K14059	int; integrase	NA
UHGV-1941403_18	PHROG	phrog_1	integrase	integration and excision
UHGV-1941403_18	UniRef90	UniRef90_A0A174GHX2	Site-specific integrase	NA
UHGV-1941403_18	eggNOG-mapper	1408437.JNJN01000054_gene2088	DNA integration	NA
UHGV-1941403_18	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-1941403_18	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1941403_18	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1941403_18	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-1941403_19	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-1941403_19	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-1941403_19	UniRef90	UniRef90_V2Y411	Peptidase S24-like protein	NA
UHGV-1941403_19	eggNOG-mapper	1160721.RBI_II00559	Peptidase S24-like	NA
UHGV-1941403_19	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-1941403_19	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-1941403_21	PHROG	phrog_20886	NA	unknown function
UHGV-1941403_21	UniRef90	UniRef90_A0A644X5X5	Galectin domain-containing protein	NA
UHGV-1941403_21	eggNOG-mapper	1232443.BAIA02000106_gene3117	NA	NA
UHGV-1941403_22	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1941403_22	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1941403_22	UniRef90	UniRef90_UPI0012AB6F6D	helix-turn-helix domain-containing protein	NA
UHGV-1941403_22	eggNOG-mapper	1232443.BAIA02000106_gene3116	Helix-turn-helix	NA
UHGV-1941403_22	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-1941403_22	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1941403_22	Structural annotation	PF12844, MF_02017, NF041951, COG3655	NA	NA
UHGV-1941403_23	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1941403_23	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1941403_23	UniRef90	UniRef90_A0A096BAN9	HTH cro/C1-type domain-containing protein	NA
UHGV-1941403_23	eggNOG-mapper	1536772.R70723_06535	addiction module antidote protein HigA	NA
UHGV-1941403_23	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-1941403_23	COG	COG3093	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	NA
UHGV-1941403_23	Structural annotation	PF13443, NF041951, COG1396	NA	NA
UHGV-1941403_24	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1941403_24	UniRef90	UniRef90_A0A1C5SM14	HNHc domain-containing protein	NA
UHGV-1941403_24	eggNOG-mapper	861530.ALOZ01000074_gene990	HNH endonuclease	NA
UHGV-1941403_24	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-1941403_24	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-1941403_24	Structural annotation	PF08281, PF13392, MF_00245, NF001066, COG2771	NA	NA
UHGV-1941403_28	PHROG	phrog_32437	NA	unknown function
UHGV-1941403_28	UniRef90	UniRef90_A0A844KCK0	Transglycosylase SLT domain-containing protein	NA
UHGV-1941403_28	eggNOG-mapper	525903.Taci_1332	PFAM Lytic transglycosylase catalytic	NA
UHGV-1941403_28	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-1941403_28	COG	COG0741	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	NA
UHGV-1941403_32	eggNOG-mapper	1280671.AUJH01000012_gene3173	NA	NA
UHGV-1941403_36	PHROG	phrog_38832	NA	unknown function
UHGV-1941403_36	eggNOG-mapper	665956.HMPREF1032_03087	NA	NA
UHGV-1941403_37	PHROG	phrog_19515	NA	unknown function
UHGV-1941403_37	eggNOG-mapper	476272.RUMHYD_03334	NA	NA
UHGV-1941403_40	UniRef90	UniRef90_A0A1C6CZV1	Transcriptional regulator, y4mF family	NA
UHGV-1941403_40	eggNOG-mapper	537007.BLAHAN_04265	Cro/C1-type HTH DNA-binding domain	NA
UHGV-1941403_40	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1941403_40	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1941403_46	eggNOG-mapper	1235794.C811_00576	NA	NA
UHGV-1941403_47	PHROG	phrog_1227	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-1941403_47	UniRef90	UniRef90_UPI001D05E08F	PD-(D/E)XK nuclease-like domain-containing protein	NA
UHGV-1941403_47	eggNOG-mapper	861454.HMPREF9099_00347	NA	NA
UHGV-1941403_47	Pfam	PF12684	NA	DUF3799
UHGV-1941403_47	COG	COG1074	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	NA
UHGV-1941403_47	Structural annotation	PF12684, TIGR01896, COG4343	NA	NA
UHGV-1941403_49	PHROG	phrog_124	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1941403_49	UniRef90	UniRef90_UPI001D097C08	ATP-binding protein	NA
UHGV-1941403_49	eggNOG-mapper	435838.HMPREF0786_00892	AAA domain	NA
UHGV-1941403_49	Pfam	PF13479	AAA domain	AAA_24
UHGV-1941403_49	Structural annotation	PF13479, MF_00268, TIGR01618, COG2874	NA	NA
UHGV-1941403_51	KOfam	K03698	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	NA
UHGV-1941403_51	PHROG	phrog_28876	metal-dependent phosphohydrolase	other
UHGV-1941403_51	UniRef90	UniRef90_UPI00189C14D9	hydrolase	NA
UHGV-1941403_51	eggNOG-mapper	1123009.AUID01000006_gene928	metal-dependent phosphohydrolase, HD sub domain	NA
UHGV-1941403_51	Pfam	PF01966	HD domain	HD
UHGV-1941403_51	COG	COG3481	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	NA
UHGV-1941403_51	Structural annotation	PF07514, MF_01427, NF010007, COG3481	NA	NA
UHGV-1941403_52	PHROG	phrog_378	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1941403_52	UniRef90	UniRef90_UPI001D0929DA	NA	NA
UHGV-1941403_52	Pfam	PF05037	NA	DUF669
UHGV-1941403_52	Structural annotation	PF05037	NA	NA
UHGV-1941403_53	KOfam	K19789	radD; DNA repair protein RadD	NA
UHGV-1941403_53	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-1941403_53	UniRef90	UniRef90_A0A1U7M6F3	UvrABC system protein B	NA
UHGV-1941403_53	eggNOG-mapper	1410670.JHXF01000015_gene2270	helicase	NA
UHGV-1941403_53	PADLOC	mREase_IV_00005	Type IV methyl-directed restriction enzyme	RM
UHGV-1941403_53	Pfam	PF04851	Type III restriction enzyme, res subunit	ResIII
UHGV-1941403_53	Pfam	PF18766	SWI2/SNF2 ATPase	SWI2_SNF2
UHGV-1941403_53	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-1941403_53	COG	COG1061	Superfamily II DNA or RNA helicase	NA
UHGV-1941403_53	Structural annotation	PF04851, PF00271, MF_01489, TIGR04095, COG1061	NA	NA
UHGV-1941403_54	PHROG	phrog_5702	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1941403_54	UniRef90	UniRef90_UPI000C0691A8	VRR-NUC domain-containing protein	NA
UHGV-1941403_54	eggNOG-mapper	1121428.DESHY_20124___1	VRR-NUC domain	NA
UHGV-1941403_54	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-1941403_54	Structural annotation	PF01870, MF_00130, NF002581, COG1591	NA	NA
UHGV-1941403_55	KOfam	K02316	dnaG; DNA primase [EC:2.7.7.101]	NA
UHGV-1941403_55	PHROG	phrog_864	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-1941403_55	UniRef90	UniRef90_A0A374HKH8	Toprim domain-containing protein	NA
UHGV-1941403_55	eggNOG-mapper	469596.HMPREF9488_01547	D5 N terminal like	NA
UHGV-1941403_55	Pfam	PF13155	Toprim-like	Toprim_2
UHGV-1941403_55	Pfam	PF08706	D5 N terminal like	D5_N
UHGV-1941403_55	Pfam	PF19263	NA	DUF5906
UHGV-1941403_55	NCBIFam	TIGR01613.1	phage/plasmid primase, P4 family	NA
UHGV-1941403_55	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-1941403_55	Structural annotation	PF04735, MF_00974, MF_04000, NF005477, COG3378, COG0358	NA	NA
UHGV-1941403_58	UniRef90	UniRef90_UPI001D07B715	DNA-packaging protein	NA
UHGV-1941403_58	eggNOG-mapper	1235793.C809_00539	NA	NA
UHGV-1941403_58	Structural annotation	PF16677	NA	NA
UHGV-1941403_59	eggNOG-mapper	1095770.CAHE01000088_gene1836	NA	NA
UHGV-1941403_60	UniRef90	UniRef90_A0A8D9PGX6	Histidine triad protein	NA
UHGV-1941403_60	Structural annotation	MF_00085, NF003076, COG0231	NA	NA
UHGV-1941403_61	eggNOG-mapper	547042.BACCOPRO_02157	MutS domain I	NA
UHGV-1941403_61	COG	COG0249	DNA mismatch repair ATPase MutS	NA
UHGV-1941403_64	UniRef90	UniRef90_A0A7C6Y3R2	Helix-turn-helix domain-containing protein	NA
UHGV-1941403_64	Structural annotation	PF20075, TIGR03070	NA	NA
UHGV-1941403_65	KOfam	K14060	pinR; putative DNA-invertase from lambdoid prophage Rac	NA
UHGV-1941403_65	PHROG	phrog_125	DNA invertase	DNA, RNA and nucleotide metabolism
UHGV-1941403_65	UniRef90	UniRef90_UPI001C023A41	recombinase family protein	NA
UHGV-1941403_65	eggNOG-mapper	1408423.JHYA01000001_gene988	Resolvase, N terminal domain	NA
UHGV-1941403_65	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-1941403_65	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-1941403_65	Structural annotation	PF00239, PF02796, MF_00489, NF009949, COG1961	NA	NA
UHGV-1941403_67	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-1941403_67	UniRef90	UniRef90_UPI001D063AE7	phage terminase large subunit	NA
UHGV-1941403_67	eggNOG-mapper	1232453.BAIF02000058_gene1623	TIGRFAM Phage	NA
UHGV-1941403_67	COG	COG5410	NA	NA
UHGV-1941403_67	Structural annotation	PF17289, PF02562, MF_04147, NF033889, COG5362, COG5410	NA	NA
UHGV-1941403_69	PHROG	phrog_64	portal protein	head and packaging
UHGV-1941403_69	UniRef90	UniRef90_A0A6I2QXE1	Phage portal protein	NA
UHGV-1941403_69	eggNOG-mapper	1121866.AUGK01000003_gene1429	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1941403_69	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1941403_69	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-1941403_71	PHROG	phrog_909	major head protein	head and packaging
UHGV-1941403_71	eggNOG-mapper	1298920.KI911353_gene2661	NA	NA
UHGV-1941403_72	PHROG	phrog_29	major head protein	head and packaging
UHGV-1941403_72	UniRef90	UniRef90_UPI000CDB6260	major capsid protein	NA
UHGV-1941403_72	eggNOG-mapper	1298920.KI911353_gene2660	Phage major capsid protein E	NA
UHGV-1941403_72	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-1941403_72	Structural annotation	PF03864, MF_04133, NF041162, COG4653	NA	NA
UHGV-1941403_74	UniRef90	UniRef90_A0A845R6M6	DNA-packaging protein	NA
UHGV-1941403_74	eggNOG-mapper	996306.SSUR61_0983	NA	NA
UHGV-1941403_74	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-1941403_74	Structural annotation	TIGR01560	NA	NA
UHGV-1941403_75	eggNOG-mapper	1232453.BAIF02000058_gene1630	NA	NA
UHGV-1941403_76	UniRef90	UniRef90_UPI001BBD4500	HK97 gp10 family phage protein	NA
UHGV-1941403_76	eggNOG-mapper	397290.C810_01411	NA	NA
UHGV-1941403_76	Structural annotation	PF17395, TIGR01725, COG5005	NA	NA
UHGV-1941403_77	Structural annotation	PF06141, TIGR02367, COG3167	NA	NA
UHGV-1941403_78	PHROG	phrog_158	major tail protein	tail
UHGV-1941403_78	UniRef90	UniRef90_UPI00189AB4AD	phage tail protein	NA
UHGV-1941403_78	eggNOG-mapper	1158607.UAU_01767	Phage tail tube protein, TTP	NA
UHGV-1941403_78	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-1941403_79	UniRef90	UniRef90_A0A845R9E6	NA	NA
UHGV-1941403_79	Pfam	PF16478	NA	DUF5055
UHGV-1941403_79	Structural annotation	PF16478	NA	NA
UHGV-1941403_80	eggNOG-mapper	1121333.JMLH01000047_gene1011	NA	NA
UHGV-1941403_81	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1941403_81	eggNOG-mapper	1121866.AUGK01000003_gene1437	phage tail tape measure protein	NA
UHGV-1941403_81	COG	COG1280	Threonine/homoserine/homoserine lactone efflux protein	NA
UHGV-1941403_82	PHROG	phrog_1194	NA	unknown function
UHGV-1941403_82	UniRef90	UniRef90_A0A0B3WNQ4	NA	NA
UHGV-1941403_82	eggNOG-mapper	1219626.HMPREF1639_07230	NA	NA
UHGV-1941403_82	Pfam	PF20458	NA	DUF6711
UHGV-1941403_82	Structural annotation	PF20458, TIGR02126, COG5437	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1941403	Yes	48,928 bps	53.13%	98.16%	0.9724
UHGV-1510834	No	40,549 bps	52.45%	78.91%	0.9747
UHGV-2231205	No	26,853 bps	53.09%	54.14%	0.9776
UHGV-0210790	No	19,985 bps	52.39%	43.10%	0.9729
UHGV-0210786	No	12,142 bps	53.76%	23.06%	0.9818