vOTU-061947

Overview

No. of genomes 27

Genome length 14,683 bps

Completeness 76.51% (medium-quality)

Host CAG-83 sp000431575

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-061947
Number of genomes	27
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes › Salasmaviridae
Taxonomy (UHGV)	vFAM-00015 › vSUBFAM-00650 › vOTU-061947
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-83 › CAG-83 sp000431575
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1417413
BioSample	SAMEA2338775
Genome length	14,683 bps
CheckV completeness	76.51% (medium-quality)
CheckV contamination	0.00%
CDS count	20
CDS density	90.87%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1417413_1	KOfam	K02238	comEC; competence protein ComEC	NA
UHGV-1417413_1	PHROG	phrog_7043	tail protein	tail
UHGV-1417413_1	eggNOG-mapper	445335.CBN_0571	Beta-lactamase superfamily domain	NA
UHGV-1417413_1	Pfam	PF00753	Metallo-beta-lactamase superfamily	Lactamase_B
UHGV-1417413_1	COG	COG2333	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	NA
UHGV-1417413_1	Structural annotation	MF_01266, NF003287, COG2333	NA	NA
UHGV-1417413_2	PHROG	phrog_3225	adaptor Ad4	connector
UHGV-1417413_2	UniRef90	UniRef90_A0A8D6XVH1	Lower collar protein (Virfam: adaptor Ad4)	NA
UHGV-1417413_2	eggNOG-mapper	10756.TUB11_BPPH2	NA	NA
UHGV-1417413_3	PHROG	phrog_2038	upper collar connector	connector
UHGV-1417413_3	UniRef90	UniRef90_A0A345MZG5	Upper collar protein	NA
UHGV-1417413_3	eggNOG-mapper	10756.PORTL_BPPH2	Phage Connector (GP10)	NA
UHGV-1417413_3	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-1417413_3	Structural annotation	PF05352, TIGR01538, COG4695	NA	NA
UHGV-1417413_4	PHROG	phrog_2248	tail protein	tail
UHGV-1417413_4	UniRef90	UniRef90_A0A843HUB8	Caud_tail_N domain-containing protein	NA
UHGV-1417413_4	eggNOG-mapper	10756.DIT9_BPPH2	NA	NA
UHGV-1417413_4	Pfam	PF16838	Caudoviral major tail protein N-terminus	Caud_tail_N
UHGV-1417413_4	Pfam	PF20934	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
UHGV-1417413_4	Structural annotation	PF20934, PF16838	NA	NA
UHGV-1417413_5	PHROG	phrog_2006	major head protein	head and packaging
UHGV-1417413_5	UniRef90	UniRef90_A0A843HGC7	Ig-like domain-containing protein	NA
UHGV-1417413_5	eggNOG-mapper	10756.CAPSD_BPPH2	viral capsid	NA
UHGV-1417413_5	Structural annotation	PF19821, PF02368, MF_04119, NF033394, COG1659	NA	NA
UHGV-1417413_7	Pfam	PF05257	CHAP domain	CHAP
UHGV-1417413_7	COG	COG3942	Surface antigen	NA
UHGV-1417413_8	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1417413_8	PHROG	phrog_435	endolysin	lysis
UHGV-1417413_8	UniRef90	UniRef90_A0A3D5TEB1	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1417413_8	eggNOG-mapper	994573.T472_0210960	n-acetylmuramoyl-l-alanine amidase	NA
UHGV-1417413_8	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1417413_8	Pfam	PF05036	SPOR domain	SPOR
UHGV-1417413_8	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1417413_8	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-1417413_10	PHROG	phrog_2150	terminase	head and packaging
UHGV-1417413_10	UniRef90	UniRef90_A0A843HJH1	Phage DNA encapsidation protein	NA
UHGV-1417413_10	eggNOG-mapper	1162304.I3PV13_9CAUD	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-1417413_10	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-1417413_10	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1417413_11	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-1417413_11	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1417413_12	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-1417413_12	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1417413_12	UniRef90	UniRef90_A0A077ZQ14	DNA-directed DNA polymerase	NA
UHGV-1417413_12	eggNOG-mapper	10753.DPOL_BPNF	nucleotide binding	NA
UHGV-1417413_12	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-1417413_12	Structural annotation	PF03175	NA	NA
UHGV-1417413_14	Structural annotation	PF17427	NA	NA
UHGV-1417413_15	Structural annotation	PF17548	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1417413	Yes	14,683 bps	40.29%	76.51%	0.9780
UHGV-0252762	No	15,304 bps	40.12%	99.90%	0.9808
UHGV-0108758	No	15,231 bps	40.25%	81.19%	0.9796
UHGV-1455162	No	15,133 bps	40.47%	80.67%	0.9786
UHGV-1495216	No	15,020 bps	40.50%	80.07%	0.9789
UHGV-1457992	No	15,248 bps	40.34%	79.95%	0.9761
UHGV-1336994	No	15,231 bps	40.33%	79.86%	0.9804
UHGV-1456787	No	15,231 bps	40.33%	79.86%	0.9769
UHGV-1498296	No	14,913 bps	40.37%	79.50%	0.9790
UHGV-1498299	No	14,913 bps	40.37%	79.50%	0.9792
UHGV-0192926	No	15,147 bps	40.23%	79.42%	0.9764
UHGV-1494363	No	14,819 bps	40.62%	79.00%	0.9800
UHGV-1497491	No	15,049 bps	40.27%	78.91%	0.9798
UHGV-1498658	No	14,915 bps	40.50%	78.20%	0.9782
UHGV-2204094	No	14,662 bps	40.38%	78.15%	0.9795
UHGV-1494878	No	14,792 bps	40.38%	77.55%	0.9771
UHGV-1418264	No	14,701 bps	40.28%	77.08%	0.9764
UHGV-1417417	No	14,687 bps	40.30%	77.00%	0.9764
UHGV-1413468	No	14,483 bps	40.15%	75.94%	0.9815
UHGV-1410813	No	14,449 bps	40.13%	75.76%	0.9811
UHGV-1411071	No	14,441 bps	40.25%	75.72%	0.9796
UHGV-1444426	No	14,240 bps	40.30%	74.66%	0.9782
UHGV-1444430	No	14,234 bps	40.29%	74.63%	0.9797
UHGV-1448302	No	14,026 bps	40.42%	73.53%	0.9792
UHGV-0368501	No	13,697 bps	40.37%	73.01%	0.9819
UHGV-1450952	No	13,880 bps	40.37%	72.77%	0.9796
UHGV-1443343	No	10,812 bps	40.39%	59.21%	0.9788