vOTU-062562

Overview

vOTU representative UHGV-0200004

No. of genomes 2

Genome length 42,671 bps

Completeness 99.15% (high-quality)

Host Muricomes oroticus

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-062562
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-05764 › vGENUS-13217 › vSUBGEN-21037 › vOTU-062562
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Muricomes › Muricomes oroticus
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0200004
BioSample	NA
Genome length	42,671 bps
CheckV completeness	99.15% (high-quality)
CheckV contamination	0.00%
CDS count	67
CDS density	94.61%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0200004_1	KOfam	K14059	int; integrase	NA
UHGV-0200004_1	PHROG	phrog_1	integrase	integration and excision
UHGV-0200004_1	UniRef90	UniRef90_A0A174BTR8	Site-specific tyrosine recombinase XerC	NA
UHGV-0200004_1	eggNOG-mapper	1232453.BAIF02000110_gene768	Phage integrase family	NA
UHGV-0200004_1	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0200004_1	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0200004_1	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0200004_2	UniRef90	UniRef90_A0A4R4FF33	NA	NA
UHGV-0200004_2	eggNOG-mapper	1050201.KB913034_gene965	NA	NA
UHGV-0200004_2	Structural annotation	PF11611, PF03843, MF_00791, MF_01959, TIGR03943, NF003465, COG3065, COG2967	NA	NA
UHGV-0200004_3	PHROG	phrog_1914	NA	unknown function
UHGV-0200004_3	UniRef90	UniRef90_UPI00068F15FE	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-0200004_3	eggNOG-mapper	411468.CLOSCI_02400	NA	NA
UHGV-0200004_3	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0200004_3	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0200004_3	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0200004_4	UniRef90	UniRef90_F7KUY0	HTH cro/C1-type domain-containing protein	NA
UHGV-0200004_4	eggNOG-mapper	556261.HMPREF0240_01803	Helix-turn-helix XRE-family like proteins	NA
UHGV-0200004_4	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0200004_4	Structural annotation	PF13443, MF_00535, NF041951, COG3655	NA	NA
UHGV-0200004_5	UniRef90	UniRef90_A9KQ38	Putative phage-related DNA binding protein	NA
UHGV-0200004_5	eggNOG-mapper	357809.Cphy_2993	NA	NA
UHGV-0200004_6	PHROG	phrog_362	transcriptional repressor	transcription regulation
UHGV-0200004_6	UniRef90	UniRef90_A0A2Y9BHM8	LexA DNA binding domain-containing protein	NA
UHGV-0200004_6	Pfam	PF01726	LexA DNA binding domain	LexA_DNA_bind
UHGV-0200004_6	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0200004_6	Structural annotation	PF01726, MF_00732, TIGR02944, COG1321	NA	NA
UHGV-0200004_11	PHROG	phrog_373	anti-repressor	transcription regulation
UHGV-0200004_11	UniRef90	UniRef90_A0A7G5MY83	Toxin Bro	NA
UHGV-0200004_11	eggNOG-mapper	478749.BRYFOR_07645	Phage regulatory protein	NA
UHGV-0200004_11	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0200004_11	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-0200004_11	COG	COG3646	Phage regulatory protein Rha	NA
UHGV-0200004_11	Structural annotation	PF09669, TIGR02681, COG3646	NA	NA
UHGV-0200004_12	UniRef90	UniRef90_A0A7G9W9F3	Helix-turn-helix transcriptional regulator	NA
UHGV-0200004_12	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0200004_14	eggNOG-mapper	1235792.C808_03087	NA	NA
UHGV-0200004_15	KOfam	K03546	sbcC, rad50; DNA repair protein SbcC/Rad50	NA
UHGV-0200004_15	PHROG	phrog_1499	NA	unknown function
UHGV-0200004_15	UniRef90	UniRef90_A0A2Y9BM89	AAA domain-containing protein	NA
UHGV-0200004_15	eggNOG-mapper	742733.HMPREF9469_01850	DNA recombination	NA
UHGV-0200004_15	Pfam	PF13476	AAA domain	AAA_23
UHGV-0200004_15	COG	COG0497	DNA repair ATPase RecN	NA
UHGV-0200004_15	Structural annotation	PF11398, MF_00365, NF008121, COG0497	NA	NA
UHGV-0200004_16	PHROG	phrog_561	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0200004_16	UniRef90	UniRef90_A0A6N7W7U3	Recombinase RecT	NA
UHGV-0200004_16	eggNOG-mapper	33035.JPJF01000071_gene4462	NA	NA
UHGV-0200004_16	Pfam	PF03837	RecT family	RecT
UHGV-0200004_16	Structural annotation	PF03837, TIGR01913	NA	NA
UHGV-0200004_17	PHROG	phrog_1227	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0200004_17	UniRef90	UniRef90_A0A4P6LTY0	NA	NA
UHGV-0200004_17	eggNOG-mapper	33035.JPJF01000071_gene4463	NA	NA
UHGV-0200004_17	Pfam	PF12684	NA	DUF3799
UHGV-0200004_17	COG	COG1074	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	NA
UHGV-0200004_17	Structural annotation	PF12684, TIGR01896, COG4343	NA	NA
UHGV-0200004_18	PHROG	phrog_7566	NA	unknown function
UHGV-0200004_18	UniRef90	UniRef90_A0A373CFM5	ClpX-type ZB domain-containing protein	NA
UHGV-0200004_18	eggNOG-mapper	742733.HMPREF9469_01847	NA	NA
UHGV-0200004_19	PHROG	phrog_1682	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0200004_19	UniRef90	UniRef90_A0A0F0CCS0	Endodeoxyribonuclease RusA	NA
UHGV-0200004_19	eggNOG-mapper	742733.HMPREF9469_01846	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	NA
UHGV-0200004_19	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0200004_19	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0200004_20	PHROG	phrog_2514	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0200004_20	UniRef90	UniRef90_UPI001C1E0E19	GntR family transcriptional regulator	NA
UHGV-0200004_20	eggNOG-mapper	1211814.CAPG01000074_gene3480	DnaD domain protein	NA
UHGV-0200004_20	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0200004_20	Structural annotation	PF09681, MF_01177, TIGR01714, COG0640	NA	NA
UHGV-0200004_21	PHROG	phrog_2289	helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0200004_21	UniRef90	UniRef90_A0A2Y9BHN6	Loader and inhibitor of G40P protein	NA
UHGV-0200004_21	eggNOG-mapper	585394.RHOM_14005	Loader and inhibitor of phage G40P	NA
UHGV-0200004_21	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-0200004_23	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0200004_26	PHROG	phrog_1454	NA	unknown function
UHGV-0200004_26	UniRef90	UniRef90_A0A0D1WCB4	Phosphomannomutase	NA
UHGV-0200004_26	eggNOG-mapper	742740.HMPREF9474_04325	NA	NA
UHGV-0200004_30	PHROG	phrog_986	RNA-binding protein	DNA, RNA and nucleotide metabolism
UHGV-0200004_30	UniRef90	UniRef90_A0A6N2U0G1	ASCH domain-containing protein	NA
UHGV-0200004_30	eggNOG-mapper	1234679.BN424_2153	NA	NA
UHGV-0200004_30	Pfam	PF12961	NA	DUF3850
UHGV-0200004_31	PHROG	phrog_757	DNA methyltransferase	other
UHGV-0200004_31	UniRef90	UniRef90_UPI00137A1EA0	DNA cytosine methyltransferase	NA
UHGV-0200004_31	eggNOG-mapper	742733.HMPREF9469_01835	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-0200004_31	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0200004_31	Structural annotation	PF00145, MF_01872, TIGR00675, COG0270	NA	NA
UHGV-0200004_32	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0200004_33	PHROG	phrog_25754	NA	unknown function
UHGV-0200004_33	eggNOG-mapper	1196322.A370_02055	NA	NA
UHGV-0200004_33	Structural annotation	PF18195, MF_00257, NF041655, COG1923	NA	NA
UHGV-0200004_40	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0200004_40	eggNOG-mapper	742765.HMPREF9457_02116	NA	NA
UHGV-0200004_40	Structural annotation	PF02996	NA	NA
UHGV-0200004_41	eggNOG-mapper	411902.CLOBOL_04413	NA	NA
UHGV-0200004_41	Structural annotation	PF20505, NF001460, COG2974	NA	NA
UHGV-0200004_42	eggNOG-mapper	411902.CLOBOL_04414	NA	NA
UHGV-0200004_42	Structural annotation	PF19363, COG3355	NA	NA
UHGV-0200004_43	PHROG	phrog_18586	NA	unknown function
UHGV-0200004_43	UniRef90	UniRef90_UPI001F3082DB	restriction endonuclease	NA
UHGV-0200004_43	eggNOG-mapper	411902.CLOBOL_04415	NA	NA
UHGV-0200004_43	Pfam	PF04471	Restriction endonuclease	Mrr_cat
UHGV-0200004_43	Structural annotation	PF04471, COG1715	NA	NA
UHGV-0200004_44	PHROG	phrog_1889	terminase small subunit	head and packaging
UHGV-0200004_44	UniRef90	UniRef90_UPI001EE889A0	phage terminase small subunit	NA
UHGV-0200004_44	eggNOG-mapper	33035.JPJF01000107_gene435	NA	NA
UHGV-0200004_44	Pfam	PF10668	Phage terminase small subunit	Phage_terminase
UHGV-0200004_44	NCBIFam	NF040601.1	phage terminase small subunit	NA
UHGV-0200004_44	COG	COG5484	NA	NA
UHGV-0200004_44	Structural annotation	PF06056, NF040601, COG5484	NA	NA
UHGV-0200004_45	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0200004_45	PHROG	phrog_10250	NA	unknown function
UHGV-0200004_45	UniRef90	UniRef90_UPI0011DD38A6	PBSX family phage terminase large subunit	NA
UHGV-0200004_45	eggNOG-mapper	903814.ELI_3215	Phage terminase large subunit	NA
UHGV-0200004_45	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0200004_45	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0200004_45	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0200004_45	COG	COG1783	Phage terminase large subunit	NA
UHGV-0200004_45	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0200004_46	PHROG	phrog_64	portal protein	head and packaging
UHGV-0200004_46	UniRef90	UniRef90_UPI001652B712	phage portal protein	NA
UHGV-0200004_46	eggNOG-mapper	742733.HMPREF9469_01826	Phage portal protein, SPP1 family	NA
UHGV-0200004_46	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0200004_46	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-0200004_46	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0200004_47	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0200004_47	UniRef90	UniRef90_UPI001EE824E9	minor capsid protein	NA
UHGV-0200004_47	eggNOG-mapper	742733.HMPREF9469_01825	Phage head morphogenesis protein, SPP1 gp7 family	NA
UHGV-0200004_47	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0200004_47	Pfam	PF21814	NA	DUF6883
UHGV-0200004_47	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0200004_47	COG	COG2369	NA	NA
UHGV-0200004_47	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0200004_48	PHROG	phrog_34731	NA	unknown function
UHGV-0200004_48	eggNOG-mapper	365659.smi_0098	Cysteine-rich CPCC	NA
UHGV-0200004_48	Structural annotation	PF02699, MF_00369, TIGR00739, COG5475	NA	NA
UHGV-0200004_49	PHROG	phrog_172	head scaffolding protein	head and packaging
UHGV-0200004_49	UniRef90	UniRef90_UPI0011DE2207	NA	NA
UHGV-0200004_49	eggNOG-mapper	742733.HMPREF9469_01824	NA	NA
UHGV-0200004_49	Pfam	PF14265	NA	DUF4355
UHGV-0200004_49	Structural annotation	PF14265	NA	NA
UHGV-0200004_50	PHROG	phrog_247	major head protein	head and packaging
UHGV-0200004_50	UniRef90	UniRef90_UPI00156DFF0E	coat protein	NA
UHGV-0200004_50	eggNOG-mapper	1304866.K413DRAFT_3038	NA	NA
UHGV-0200004_50	Structural annotation	PF20036, MF_04113, TIGR04387, COG4653	NA	NA
UHGV-0200004_51	PHROG	phrog_132	head-tail adaptor	connector
UHGV-0200004_51	UniRef90	UniRef90_A0A173WLV7	Phage gp6-like head-tail connector protein	NA
UHGV-0200004_51	eggNOG-mapper	742733.HMPREF9469_01821	Phage gp6-like head-tail connector protein	NA
UHGV-0200004_51	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0200004_51	Structural annotation	PF05135	NA	NA
UHGV-0200004_52	PHROG	phrog_2168	NA	unknown function
UHGV-0200004_52	eggNOG-mapper	742733.HMPREF9469_01820	NA	NA
UHGV-0200004_52	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0200004_53	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0200004_53	UniRef90	UniRef90_UPI0011DDF215	HK97 gp10 family phage protein	NA
UHGV-0200004_53	eggNOG-mapper	742733.HMPREF9469_01819	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0200004_53	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0200004_54	PHROG	phrog_78	tail terminator	connector
UHGV-0200004_54	eggNOG-mapper	1280689.AUJC01000003_gene971	NA	NA
UHGV-0200004_54	Structural annotation	PF05657	NA	NA
UHGV-0200004_55	PHROG	phrog_158	major tail protein	tail
UHGV-0200004_55	UniRef90	UniRef90_A0A1M7JWZ7	Phage tail tube protein, TTP	NA
UHGV-0200004_55	eggNOG-mapper	742733.HMPREF9469_01817	Phage tail tube protein, TTP	NA
UHGV-0200004_55	Pfam	PF08813	Phage tail tube protein, TTP	Phage_tail_3
UHGV-0200004_55	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-0200004_56	PHROG	phrog_183	tail chaperone protein	tail
UHGV-0200004_56	UniRef90	UniRef90_UPI001EE8B5C4	NA	NA
UHGV-0200004_56	eggNOG-mapper	742733.HMPREF9469_01816	NA	NA
UHGV-0200004_56	Pfam	PF19591	NA	DUF6096
UHGV-0200004_56	Structural annotation	PF19591	NA	NA
UHGV-0200004_57	eggNOG-mapper	445974.CLORAM_02922	NA	NA
UHGV-0200004_58	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0200004_58	UniRef90	UniRef90_A0A1C5L9Y5	Phage-related protein	NA
UHGV-0200004_58	eggNOG-mapper	1232453.BAIF02000058_gene1637	phage tail tape measure protein	NA
UHGV-0200004_58	COG	COG5412	Phage-related protein	NA
UHGV-0200004_59	PHROG	phrog_1194	NA	unknown function
UHGV-0200004_59	eggNOG-mapper	1121866.AUGK01000003_gene1438	NA	NA
UHGV-0200004_59	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0200004_60	PHROG	phrog_6616	tail protein	tail
UHGV-0200004_60	UniRef90	UniRef90_A0A2Y9BMC1	Peptidase S74 domain-containing protein	NA
UHGV-0200004_60	eggNOG-mapper	476272.RUMHYD_01992	NA	NA
UHGV-0200004_60	Structural annotation	PF05113, PF18432, NF033848, NF011735, COG4379	NA	NA
UHGV-0200004_61	PHROG	phrog_18444	NA	unknown function
UHGV-0200004_61	eggNOG-mapper	411459.RUMOBE_00912	NA	NA
UHGV-0200004_62	PHROG	phrog_14959	NA	unknown function
UHGV-0200004_62	eggNOG-mapper	657322.FPR_22010	NA	NA
UHGV-0200004_63	KOfam	K18808	TLR13; toll-like receptor 13	NA
UHGV-0200004_63	PHROG	phrog_14959	NA	unknown function
UHGV-0200004_63	UniRef90	UniRef90_A0A2Y9BHR7	Surface protein	NA
UHGV-0200004_63	eggNOG-mapper	657322.FPR_22010	NA	NA
UHGV-0200004_63	Pfam	PF03382	NA	DUF285
UHGV-0200004_63	Pfam	PF13855	Leucine rich repeat	LRR_8
UHGV-0200004_63	NCBIFam	TIGR02167.1	bacterial surface protein 26-residue repeat	NA
UHGV-0200004_65	PHROG	phrog_18593	NA	unknown function
UHGV-0200004_65	UniRef90	UniRef90_A0A2Y9CAD1	Carbohydrate binding domain-containing protein	NA
UHGV-0200004_65	eggNOG-mapper	411460.RUMTOR_02099	NA	NA
UHGV-0200004_65	Pfam	PF02839	Carbohydrate-binding module family 5/12	CBM_5_12
UHGV-0200004_65	Structural annotation	PF14600	NA	NA
UHGV-0200004_66	PHROG	phrog_1863	NA	unknown function
UHGV-0200004_66	eggNOG-mapper	718252.FP2_04900	NA	NA
UHGV-0200004_67	eggNOG-mapper	411460.RUMTOR_01325	Phage holin family Hol44, in holin superfamily V	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0200004	Yes	42,671 bps	42.50%	99.15%	0.9801
UHGV-0123505	No	44,710 bps	42.68%	99.90%	0.9799