vOTU-062617

Overview

vOTU representative UHGV-0199044

No. of genomes 2

Genome length 38,989 bps

Completeness 99.90% (high-quality)

Host Faecalibacterium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-062617
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-00167 › vGENUS-16364 › vSUBGEN-29380 › vOTU-062617
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0199044
BioSample	SAMN06164940
Genome length	38,989 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	38
CDS density	93.15%
tRNA count	1
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0199044_1	KOfam	K12264	norV; anaerobic nitric oxide reductase flavorubredoxin	NA
UHGV-0199044_1	UniRef90	UniRef90_K1UEV6	Flavoprotein	NA
UHGV-0199044_1	eggNOG-mapper	657322.FPR_29420	NA	NA
UHGV-0199044_1	Pfam	PF00258	Flavodoxin	Flavodoxin_1
UHGV-0199044_1	COG	COG0426	Flavorubredoxin	NA
UHGV-0199044_2	KOfam	K14059	int; integrase	NA
UHGV-0199044_2	PHROG	phrog_1	integrase	integration and excision
UHGV-0199044_2	UniRef90	UniRef90_A0A174D176	Tyrosine recombinase XerD	NA
UHGV-0199044_2	eggNOG-mapper	411471.SUBVAR_05137	Belongs to the 'phage' integrase family	NA
UHGV-0199044_2	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0199044_2	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0199044_2	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0199044_3	PHROG	phrog_2158	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UHGV-0199044_3	UniRef90	UniRef90_E2ZI86	Abi-like protein	NA
UHGV-0199044_3	eggNOG-mapper	748224.HMPREF9436_01377	Abi-like protein	NA
UHGV-0199044_3	PADLOC	AbiD	AbiD	Abi
UHGV-0199044_3	Pfam	PF07751	Abi-like protein	Abi_2
UHGV-0199044_3	COG	COG4823	Abortive infection bacteriophage resistance protein	NA
UHGV-0199044_3	Structural annotation	PF07751, COG4823	NA	NA
UHGV-0199044_5	PHROG	phrog_9425	transcriptional repressor	transcription regulation
UHGV-0199044_5	UniRef90	UniRef90_A0A329UHN5	HTH cro/C1-type domain-containing protein	NA
UHGV-0199044_5	eggNOG-mapper	718252.FP2_04820	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0199044_5	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0199044_5	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0199044_5	Structural annotation	PF13560, MF_02017, NF041951, COG1396	NA	NA
UHGV-0199044_6	UniRef90	UniRef90_A0A329UG74	DNA-binding protein	NA
UHGV-0199044_6	eggNOG-mapper	1430331.EP10_02425	NA	NA
UHGV-0199044_6	Structural annotation	PF05339, NF041951, COG1476	NA	NA
UHGV-0199044_7	Structural annotation	PF09969	NA	NA
UHGV-0199044_11	Structural annotation	PF01775, MF_00273, NF001981, COG2157	NA	NA
UHGV-0199044_13	Structural annotation	PF10735	NA	NA
UHGV-0199044_14	PHROG	phrog_24484	NA	unknown function
UHGV-0199044_15	UniRef90	UniRef90_A0A2A6ZGV7	HTH cro/C1-type domain-containing protein	NA
UHGV-0199044_15	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0199044_18	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0199044_18	eggNOG-mapper	525254.HMPREF0072_1311	NA	NA
UHGV-0199044_18	Structural annotation	PF21578, NF033538	NA	NA
UHGV-0199044_19	UniRef90	UniRef90_A0A844DP33	SqdX protein	NA
UHGV-0199044_19	Structural annotation	PF06530, MF_00674, TIGR01637, COG1342	NA	NA
UHGV-0199044_20	Pfam	PF13518	Helix-turn-helix domain	HTH_28
UHGV-0199044_21	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0199044_21	PHROG	phrog_979	terminase large subunit	head and packaging
UHGV-0199044_21	UniRef90	UniRef90_A0A316SB77	Terminase-like family protein	NA
UHGV-0199044_21	eggNOG-mapper	748224.HMPREF9436_01395	Terminase-like family	NA
UHGV-0199044_21	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0199044_21	COG	COG1783	Phage terminase large subunit	NA
UHGV-0199044_21	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0199044_22	PHROG	phrog_156	portal protein	head and packaging
UHGV-0199044_22	UniRef90	UniRef90_A0A8D9UH10	Portal protein	NA
UHGV-0199044_22	eggNOG-mapper	748224.HMPREF9436_01396	NA	NA
UHGV-0199044_22	Structural annotation	PF16510, MF_04120, TIGR01538, COG4383	NA	NA
UHGV-0199044_23	KOfam	K07584	NA	NA
UHGV-0199044_23	PHROG	phrog_13908	NA	unknown function
UHGV-0199044_23	UniRef90	UniRef90_A0A173QTW1	Predicted ribosomal protein	NA
UHGV-0199044_23	eggNOG-mapper	748224.HMPREF9436_01398	Cysteine protease Prp	NA
UHGV-0199044_23	Pfam	PF04327	Cysteine protease Prp	Peptidase_Prp
UHGV-0199044_23	COG	COG2868	NA	NA
UHGV-0199044_23	Structural annotation	PF04327, NF011133, COG2868	NA	NA
UHGV-0199044_24	PHROG	phrog_1357	major head protein	head and packaging
UHGV-0199044_24	UniRef90	UniRef90_UPI0018F44E98	N4-gp56 family major capsid protein	NA
UHGV-0199044_24	eggNOG-mapper	748224.HMPREF9436_01399	NA	NA
UHGV-0199044_24	Pfam	PF13252	NA	DUF4043
UHGV-0199044_24	NCBIFam	TIGR04387.1	N4-gp56 family major capsid protein	NA
UHGV-0199044_24	Structural annotation	PF13252, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0199044_25	PHROG	phrog_15239	NA	unknown function
UHGV-0199044_26	PHROG	phrog_12105	NA	unknown function
UHGV-0199044_27	PHROG	phrog_511	internal virion protein	head and packaging
UHGV-0199044_27	eggNOG-mapper	748224.HMPREF9436_01402	NA	NA
UHGV-0199044_27	Structural annotation	PF11134, TIGR03300, NF038126, COG1520	NA	NA
UHGV-0199044_28	UniRef90	UniRef90_A0A329TFM2	Rho-GAP domain-containing protein	NA
UHGV-0199044_29	eggNOG-mapper	748224.HMPREF9436_01404	lysozyme activity	NA
UHGV-0199044_29	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0199044_30	eggNOG-mapper	748224.HMPREF9436_01405	lysozyme activity	NA
UHGV-0199044_30	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0199044_30	Structural annotation	MF_02066	NA	NA
UHGV-0199044_31	PHROG	phrog_22978	NA	unknown function
UHGV-0199044_31	UniRef90	UniRef90_E2ZIB5	Putative septum site-determining protein MinC	NA
UHGV-0199044_31	eggNOG-mapper	748224.HMPREF9436_01406	NA	NA
UHGV-0199044_31	Pfam	PF18814	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
UHGV-0199044_32	PHROG	phrog_215	structural protein with Ig domain	head and packaging
UHGV-0199044_32	eggNOG-mapper	748224.HMPREF9436_01407	COG NOG18825 non supervised orthologous group	NA
UHGV-0199044_32	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-0199044_32	Pfam	PF19789	NA	DUF6273
UHGV-0199044_34	KOfam	K03651	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	NA
UHGV-0199044_34	PHROG	phrog_7158	NA	unknown function
UHGV-0199044_34	Pfam	PF00149	Calcineurin-like phosphoesterase	Metallophos
UHGV-0199044_34	Structural annotation	PF14582, MF_00905, NF008359, COG5555	NA	NA
UHGV-0199044_35	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-0199044_35	PHROG	phrog_216	integrase	integration and excision
UHGV-0199044_35	UniRef90	UniRef90_A0A412EKQ1	Tyr recombinase domain-containing protein	NA
UHGV-0199044_35	eggNOG-mapper	759914.BP951000_0451	Belongs to the 'phage' integrase family	NA
UHGV-0199044_35	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0199044_35	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0199044_35	Structural annotation	PF00589	NA	NA
UHGV-0199044_36	KOfam	K08640	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	NA
UHGV-0199044_36	PHROG	phrog_894	endolysin	lysis
UHGV-0199044_36	UniRef90	UniRef90_A0A3C0D0L9	Peptidase M15	NA
UHGV-0199044_36	eggNOG-mapper	748224.HMPREF9436_03320	Peptidase M15	NA
UHGV-0199044_36	Pfam	PF08291	Peptidase M15	Peptidase_M15_3
UHGV-0199044_36	COG	COG3108	NA	NA
UHGV-0199044_36	Structural annotation	PF05951, COG3108	NA	NA
UHGV-0199044_37	PHROG	phrog_199	holin	lysis
UHGV-0199044_37	UniRef90	UniRef90_A0A3E2TQU1	Holin	NA
UHGV-0199044_37	eggNOG-mapper	742740.HMPREF9474_02333	Bacteriophage holin family	NA
UHGV-0199044_37	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0199044_37	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0199044_37	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-0199044_37	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0199044_38	PHROG	phrog_263	holin	lysis
UHGV-0199044_38	UniRef90	UniRef90_A0A3E2TR33	Phage holin	NA
UHGV-0199044_38	eggNOG-mapper	748224.HMPREF9436_01413	SPP1 phage holin	NA
UHGV-0199044_38	Pfam	PF04688	SPP1 phage holin	Holin_SPP1
UHGV-0199044_38	NCBIFam	TIGR01592.1	phage holin	NA
UHGV-0199044_38	Structural annotation	PF04688, TIGR01592	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0199044	Yes	38,989 bps	60.00%	99.90%	0.9751
UHGV-1270578	No	29,736 bps	61.62%	78.26%	0.9822