vOTU-062648

Overview

vOTU representative UHGV-0205356

No. of genomes 4

Genome length 40,851 bps

Completeness 99.90% (high-quality)

Host Dorea A longicatena

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-062648
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00321 › vGENUS-10558 › vSUBGEN-13978 › vOTU-062648
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Dorea A › Dorea A longicatena
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0205356
BioSample	SAMN09781772
Genome length	40,851 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	64
CDS density	90.93%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0205356_1	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-0205356_1	UniRef90	UniRef90_UPI00156D89BA	P27 family phage terminase small subunit	NA
UHGV-0205356_1	eggNOG-mapper	86416.Clopa_0336	NA	NA
UHGV-0205356_1	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0205356_1	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0205356_2	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0205356_2	UniRef90	UniRef90_UPI00156EA6D8	terminase large subunit	NA
UHGV-0205356_2	eggNOG-mapper	1211817.CCAT010000053_gene2129	Phage Terminase	NA
UHGV-0205356_2	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0205356_2	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0205356_2	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0205356_2	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0205356_3	PHROG	phrog_12	portal protein	head and packaging
UHGV-0205356_3	UniRef90	UniRef90_UPI00156EE6C1	phage portal protein	NA
UHGV-0205356_3	eggNOG-mapper	1220589.CD32_01735	portal protein	NA
UHGV-0205356_3	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0205356_3	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0205356_3	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0205356_4	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0205356_4	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0205356_4	UniRef90	UniRef90_UPI00156DC26F	Clp protease ClpP	NA
UHGV-0205356_4	eggNOG-mapper	1235792.C808_00085	Clp protease	NA
UHGV-0205356_4	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0205356_4	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0205356_4	Structural annotation	PF00574, MF_00444, TIGR00493, COG0740	NA	NA
UHGV-0205356_5	PHROG	phrog_10	major head protein	head and packaging
UHGV-0205356_5	UniRef90	UniRef90_UPI00156ED36D	phage major capsid protein	NA
UHGV-0205356_5	eggNOG-mapper	1121866.AUGK01000006_gene880	Phage capsid family	NA
UHGV-0205356_5	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0205356_5	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0205356_5	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0205356_5	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0205356_6	PHROG	phrog_749	NA	unknown function
UHGV-0205356_6	UniRef90	UniRef90_A0A6M5CBT4	Putative head-tail connector protein	NA
UHGV-0205356_6	eggNOG-mapper	202752.JL53_00780	NA	NA
UHGV-0205356_6	Structural annotation	PF05135	NA	NA
UHGV-0205356_7	PHROG	phrog_5635	head-tail adaptor	connector
UHGV-0205356_7	UniRef90	UniRef90_A0A1I3QJF5	Phage head-tail adaptor, putative, SPP1 family	NA
UHGV-0205356_7	eggNOG-mapper	1384484.AEQU_1178	NA	NA
UHGV-0205356_7	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0205356_8	Structural annotation	PF05657, COG3167	NA	NA
UHGV-0205356_9	PHROG	phrog_5509	neck protein	connector
UHGV-0205356_9	UniRef90	UniRef90_W0FMR6	Gp9 protein	NA
UHGV-0205356_9	Structural annotation	TIGR01725	NA	NA
UHGV-0205356_10	UniRef90	UniRef90_UPI00156FB996	phage tail protein	NA
UHGV-0205356_10	eggNOG-mapper	1384484.AEQU_1175	NA	NA
UHGV-0205356_10	Structural annotation	PF04630, TIGR01603, COG5437	NA	NA
UHGV-0205356_11	UniRef90	UniRef90_UPI00156FCD6F	SAP domain-containing protein	NA
UHGV-0205356_11	Pfam	PF02037	SAP domain	SAP
UHGV-0205356_11	Structural annotation	PF02037	NA	NA
UHGV-0205356_14	PHROG	phrog_13339	tail length tape measure protein	tail
UHGV-0205356_14	UniRef90	UniRef90_UPI0015701281	phage tail tape measure protein	NA
UHGV-0205356_14	eggNOG-mapper	1336234.JAGN01000004_gene517	Phage-related minor tail protein	NA
UHGV-0205356_14	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0205356_14	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0205356_14	COG	COG5283	Phage-related tail protein	NA
UHGV-0205356_14	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0205356_15	UniRef90	UniRef90_UPI0015709E93	phage tail protein	NA
UHGV-0205356_15	eggNOG-mapper	411461.DORFOR_01176	NA	NA
UHGV-0205356_15	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-0205356_16	PHROG	phrog_538	minor tail protein	tail
UHGV-0205356_16	UniRef90	UniRef90_UPI001E2C8064	siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-0205356_16	eggNOG-mapper	411461.DORFOR_01177	NA	NA
UHGV-0205356_16	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-0205356_16	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-0205356_17	PHROG	phrog_13141	NA	unknown function
UHGV-0205356_17	UniRef90	UniRef90_UPI001570499E	H-type lectin domain-containing protein	NA
UHGV-0205356_17	eggNOG-mapper	411461.DORFOR_01178	NA	NA
UHGV-0205356_17	Structural annotation	PF20747	NA	NA
UHGV-0205356_18	PHROG	phrog_12931	NA	unknown function
UHGV-0205356_18	eggNOG-mapper	742765.HMPREF9457_03370	NA	NA
UHGV-0205356_19	PHROG	phrog_19695	NA	unknown function
UHGV-0205356_19	eggNOG-mapper	411462.DORLON_00772	NA	NA
UHGV-0205356_19	Structural annotation	PF19714	NA	NA
UHGV-0205356_20	KOfam	K20846	cgkA; kappa-carrageenase [EC:3.2.1.83]	NA
UHGV-0205356_20	PHROG	phrog_215	structural protein with Ig domain	head and packaging
UHGV-0205356_20	UniRef90	UniRef90_UPI00156E217C	Ig-like domain-containing protein	NA
UHGV-0205356_20	eggNOG-mapper	411462.DORLON_00771	NA	NA
UHGV-0205356_20	Pfam	PF13472	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
UHGV-0205356_20	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-0205356_20	Structural annotation	PF10651, PF14582, MF_00905, NF008359, COG1409	NA	NA
UHGV-0205356_22	PHROG	phrog_11541	NA	unknown function
UHGV-0205356_22	eggNOG-mapper	742733.HMPREF9469_00973	NA	NA
UHGV-0205356_23	eggNOG-mapper	290402.Cbei_4417	NA	NA
UHGV-0205356_24	PHROG	phrog_1009	NA	unknown function
UHGV-0205356_24	UniRef90	UniRef90_A0A173RD60	Branched-chain amino acid ABC transporter permease	NA
UHGV-0205356_24	eggNOG-mapper	742765.HMPREF9457_03364	NA	NA
UHGV-0205356_25	PHROG	phrog_1129	holin	lysis
UHGV-0205356_25	UniRef90	UniRef90_UPI001F15FE24	phage holin family protein	NA
UHGV-0205356_25	eggNOG-mapper	411461.DORFOR_00721	NA	NA
UHGV-0205356_25	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0205356_25	Structural annotation	PF06946	NA	NA
UHGV-0205356_27	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0205356_27	PHROG	phrog_435	endolysin	lysis
UHGV-0205356_27	UniRef90	UniRef90_A0A174JR12	N-acetylmuramoyl-L-alanine amidase LytC	NA
UHGV-0205356_27	eggNOG-mapper	411461.DORFOR_01187	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0205356_27	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0205356_27	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0205356_27	Structural annotation	PF01520, PF18342, MF_00417, TIGR02883, COG0860, COG4991	NA	NA
UHGV-0205356_28	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0205356_28	PHROG	phrog_95	integrase	integration and excision
UHGV-0205356_28	UniRef90	UniRef90_UPI00157023E5	recombinase family protein	NA
UHGV-0205356_28	eggNOG-mapper	97139.C824_00068	Recombinase	NA
UHGV-0205356_28	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0205356_28	Pfam	PF07508	Recombinase	Recombinase
UHGV-0205356_28	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0205356_28	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0205356_28	Structural annotation	PF07508, PF00239, NF041201, COG1961	NA	NA
UHGV-0205356_29	KOfam	K18843	hicB; antitoxin HicB	NA
UHGV-0205356_29	PHROG	phrog_497	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UHGV-0205356_29	UniRef90	UniRef90_A0A845KIV2	Type II toxin-antitoxin system HicB family antitoxin	NA
UHGV-0205356_29	eggNOG-mapper	476272.RUMHYD_02874	Toxin-antitoxin system, antitoxin component, HicB family	NA
UHGV-0205356_29	Pfam	PF15919	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
UHGV-0205356_29	COG	COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	NA
UHGV-0205356_29	Structural annotation	PF15919, COG1598	NA	NA
UHGV-0205356_30	KOfam	K07339	hicA; mRNA interferase HicA [EC:3.1.-.-]	NA
UHGV-0205356_30	PHROG	phrog_353	toxin	moron, auxiliary metabolic gene and host takeover
UHGV-0205356_30	UniRef90	UniRef90_A0A845KJ98	Addiction module toxin, HicA family	NA
UHGV-0205356_30	eggNOG-mapper	478749.BRYFOR_07601	HicA toxin of bacterial toxin-antitoxin,	NA
UHGV-0205356_30	Pfam	PF07927	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
UHGV-0205356_30	COG	COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	NA
UHGV-0205356_30	Structural annotation	PF07927, COG1724	NA	NA
UHGV-0205356_31	KOfam	K23779	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	NA
UHGV-0205356_31	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0205356_31	UniRef90	UniRef90_UPI00156E491D	helix-turn-helix transcriptional regulator	NA
UHGV-0205356_31	eggNOG-mapper	411470.RUMGNA_00189	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0205356_31	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0205356_31	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0205356_33	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0205356_33	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0205356_33	UniRef90	UniRef90_UPI00156FE05F	helix-turn-helix domain-containing protein	NA
UHGV-0205356_33	eggNOG-mapper	411470.RUMGNA_00191	DNA-binding helix-turn-helix protein	NA
UHGV-0205356_33	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0205356_33	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0205356_33	Structural annotation	PF01381, MF_00535, NF007257, COG1476	NA	NA
UHGV-0205356_34	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0205356_34	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0205356_34	UniRef90	UniRef90_UPI00156F13F1	helix-turn-helix domain-containing protein	NA
UHGV-0205356_34	eggNOG-mapper	411470.RUMGNA_00191	DNA-binding helix-turn-helix protein	NA
UHGV-0205356_34	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0205356_34	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0205356_34	Structural annotation	PF01381, MF_00535, NF007257, COG1476	NA	NA
UHGV-0205356_36	eggNOG-mapper	1147.D082_31670	NA	NA
UHGV-0205356_36	Structural annotation	PF16538	NA	NA
UHGV-0205356_37	Structural annotation	PF21138, NF009630	NA	NA
UHGV-0205356_41	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-0205356_41	UniRef90	UniRef90_UPI00156DCAF3	Lar family restriction alleviation protein	NA
UHGV-0205356_41	eggNOG-mapper	1235790.C805_00069	Restriction alleviation protein Lar	NA
UHGV-0205356_41	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0205356_41	NCBIFam	TIGR03655.1	Lar family restriction alleviation protein	NA
UHGV-0205356_41	dbAPIS	APIS033	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	NA
UHGV-0205356_41	Structural annotation	PF14354, TIGR03655	NA	NA
UHGV-0205356_42	PHROG	phrog_23707	NA	unknown function
UHGV-0205356_42	UniRef90	UniRef90_UPI00156F2BF7	alanine racemase	NA
UHGV-0205356_42	eggNOG-mapper	411483.FAEPRAA2165_01889	NA	NA
UHGV-0205356_43	Structural annotation	PF14282	NA	NA
UHGV-0205356_46	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0205356_46	eggNOG-mapper	1280698.AUJS01000007_gene1013	NA	NA
UHGV-0205356_46	Structural annotation	PF21578, NF041486	NA	NA
UHGV-0205356_48	PHROG	phrog_824	NA	unknown function
UHGV-0205356_48	UniRef90	UniRef90_UPI0015713852	VRR-NUC domain-containing protein	NA
UHGV-0205356_48	eggNOG-mapper	411470.RUMGNA_00207	VRR_NUC	NA
UHGV-0205356_48	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-0205356_49	Structural annotation	PF12286, MF_00839, NF007780	NA	NA
UHGV-0205356_50	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-0205356_50	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0205356_50	UniRef90	UniRef90_UPI00156DD98C	ParA family protein	NA
UHGV-0205356_50	eggNOG-mapper	411459.RUMOBE_01750	CobQ CobB MinD ParA nucleotide binding domain protein	NA
UHGV-0205356_50	Pfam	PF13614	AAA domain	AAA_31
UHGV-0205356_50	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-0205356_50	Structural annotation	PF13614, MF_00533, NF010443, COG1192	NA	NA
UHGV-0205356_52	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0205356_52	PHROG	phrog_15982	NA	unknown function
UHGV-0205356_52	UniRef90	UniRef90_UPI0015702B3C	ParB/RepB/Spo0J family partition protein	NA
UHGV-0205356_52	eggNOG-mapper	411470.RUMGNA_00213	ParB-like nuclease domain	NA
UHGV-0205356_52	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0205356_52	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0205356_52	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-0205356_53	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0205356_53	UniRef90	UniRef90_UPI00156F191E	NUMOD4 domain-containing protein	NA
UHGV-0205356_53	eggNOG-mapper	1410650.JHWL01000037_gene604	NA	NA
UHGV-0205356_54	eggNOG-mapper	1410650.JHWL01000037_gene604	NA	NA
UHGV-0205356_57	PHROG	phrog_2316	NA	unknown function
UHGV-0205356_57	UniRef90	UniRef90_UPI000400DA88	NA	NA
UHGV-0205356_57	eggNOG-mapper	1280698.AUJS01000007_gene1022	NA	NA
UHGV-0205356_57	Pfam	PF16475	NA	DUF5052
UHGV-0205356_57	Structural annotation	PF16475	NA	NA
UHGV-0205356_59	KOfam	K07171	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	NA
UHGV-0205356_59	PHROG	phrog_1936	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UHGV-0205356_59	UniRef90	UniRef90_UPI0015711440	type II toxin-antitoxin system PemK/MazF family toxin	NA
UHGV-0205356_59	eggNOG-mapper	411461.DORFOR_01157	NA	NA
UHGV-0205356_59	Pfam	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
UHGV-0205356_59	COG	COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	NA
UHGV-0205356_59	Structural annotation	PF02452, NF007386, COG2337	NA	NA
UHGV-0205356_61	PHROG	phrog_6568	NA	unknown function
UHGV-0205356_62	PHROG	phrog_11237	NA	unknown function
UHGV-0205356_62	eggNOG-mapper	411461.DORFOR_01161	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0205356	Yes	40,851 bps	41.80%	99.90%	0.9769
UHGV-0190272	No	25,602 bps	42.01%	73.98%	0.9803
UHGV-1383001	No	23,594 bps	42.92%	68.18%	0.9812
UHGV-0167224	No	23,315 bps	41.93%	61.95%	0.9756