vOTU-063026

Overview

vOTU representative UHGV-0197015

No. of genomes 2

Genome length 42,974 bps

Completeness 94.29% (high-quality)

Host Clostridia

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-063026
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00157 › vSUBFAM-02129 › vGENUS-02458 › vSUBGEN-15340 › vOTU-063026
Host taxonomy	Bacteria › Firmicutes A › Clostridia
Host range breadth	Class
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0197015
BioSample	SAMN09781741
Genome length	42,974 bps
CheckV completeness	94.29% (high-quality)
CheckV contamination	0.00%
CDS count	66
CDS density	91.19%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0197015_2	Structural annotation	PF16640	NA	NA
UHGV-0197015_3	Pfam	PF13306	BspA type Leucine rich repeat region (6 copies)	LRR_5
UHGV-0197015_5	PHROG	phrog_1493	endolysin	lysis
UHGV-0197015_5	UniRef90	UniRef90_A0A1V5Q5W6	Putative peptidoglycan binding domain protein	NA
UHGV-0197015_5	eggNOG-mapper	294382.Q5YA51_9CAUD	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0197015_5	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0197015_5	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-0197015_5	Structural annotation	PF18342, PF01471, PF00877, NF038080, COG4991, COG3409, COG0791	NA	NA
UHGV-0197015_6	PHROG	phrog_199	holin	lysis
UHGV-0197015_6	UniRef90	UniRef90_A0A7X7I5M6	Phage holin family protein	NA
UHGV-0197015_6	eggNOG-mapper	986075.CathTA2_0712	Phage-related holin (Lysis protein)	NA
UHGV-0197015_6	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0197015_6	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0197015_6	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-0197015_6	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0197015_13	PHROG	phrog_18108	NA	unknown function
UHGV-0197015_13	UniRef90	UniRef90_UPI0004BFFB0D	helix-turn-helix domain-containing protein	NA
UHGV-0197015_13	eggNOG-mapper	196627.cg1967	NA	NA
UHGV-0197015_13	AcrCatalog	cluster_73909	NA	NA
UHGV-0197015_13	Structural annotation	PF07443	NA	NA
UHGV-0197015_14	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0197015_14	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0197015_14	UniRef90	UniRef90_A0A2V2FT63	HTH cro/C1-type domain-containing protein	NA
UHGV-0197015_14	eggNOG-mapper	596330.HMPREF0628_1294	sequence-specific DNA binding	NA
UHGV-0197015_14	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0197015_14	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0197015_14	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0197015_15	KOfam	K14059	int; integrase	NA
UHGV-0197015_15	PHROG	phrog_1	integrase	integration and excision
UHGV-0197015_15	UniRef90	UniRef90_A0A1V5YD17	Transposase	NA
UHGV-0197015_15	eggNOG-mapper	643648.Slip_1975	Belongs to the 'phage' integrase family	NA
UHGV-0197015_15	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0197015_15	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0197015_15	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0197015_15	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0197015_19	eggNOG-mapper	428125.CLOLEP_00924	NA	NA
UHGV-0197015_19	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0197015_19	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-0197015_20	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0197015_20	UniRef90	UniRef90_A0A658JJ51	XRE family transcriptional regulator	NA
UHGV-0197015_20	eggNOG-mapper	1226325.HMPREF1548_03112	Helix-turn-helix domain	NA
UHGV-0197015_20	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0197015_20	Structural annotation	PF12844, MF_00535, NF007257, COG3655	NA	NA
UHGV-0197015_22	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0197015_22	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0197015_22	UniRef90	UniRef90_UPI00131A422A	helix-turn-helix domain-containing protein	NA
UHGV-0197015_22	eggNOG-mapper	290397.Adeh_1147	sequence-specific DNA binding	NA
UHGV-0197015_22	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0197015_22	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0197015_22	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0197015_23	Structural annotation	PF12728, NF040990	NA	NA
UHGV-0197015_26	PHROG	phrog_7838	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0197015_26	eggNOG-mapper	742767.HMPREF9456_02052	NA	NA
UHGV-0197015_26	Structural annotation	PF04098, TIGR00607, COG5055	NA	NA
UHGV-0197015_27	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0197015_27	UniRef90	UniRef90_A0A841ZPH6	Siphovirus Gp157 family protein	NA
UHGV-0197015_27	eggNOG-mapper	755164.D6PSU0_9CAUD	Siphovirus Gp157	NA
UHGV-0197015_27	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0197015_27	Structural annotation	PF05565, NF002139	NA	NA
UHGV-0197015_28	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0197015_28	UniRef90	UniRef90_A0A8D9PDS2	NinB protein	NA
UHGV-0197015_28	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-0197015_28	Structural annotation	PF05772	NA	NA
UHGV-0197015_30	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0197015_30	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0197015_30	UniRef90	UniRef90_A0A1V5KEV3	Single-stranded DNA-binding protein	NA
UHGV-0197015_30	eggNOG-mapper	1392491.JIAE01000001_gene2290	Single-stranded DNA-binding protein	NA
UHGV-0197015_30	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0197015_30	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0197015_30	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0197015_30	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0197015_30	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-0197015_31	eggNOG-mapper	991905.SL003B_3762	NA	NA
UHGV-0197015_32	PHROG	phrog_5968	replisome organizer	DNA, RNA and nucleotide metabolism
UHGV-0197015_32	UniRef90	UniRef90_R6LWZ9	DnaD and phage-associated domain	NA
UHGV-0197015_32	eggNOG-mapper	718252.FP2_01000	NA	NA
UHGV-0197015_32	Pfam	PF09681	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
UHGV-0197015_32	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0197015_32	Structural annotation	PF09681, TIGR01714, TIGR01446, COG3935	NA	NA
UHGV-0197015_33	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-0197015_33	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0197015_33	UniRef90	UniRef90_A0A349YQ92	IstB_IS21 domain-containing protein	NA
UHGV-0197015_33	eggNOG-mapper	445972.ANACOL_01829	NA	NA
UHGV-0197015_33	COG	COG1484	DNA replication protein DnaC	NA
UHGV-0197015_33	Structural annotation	PF01695, MF_01158, NF005378, COG1484	NA	NA
UHGV-0197015_34	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0197015_34	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0197015_34	UniRef90	UniRef90_A0A7G9GLS4	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0197015_34	eggNOG-mapper	264198.Reut_A2384	Endodeoxyribonuclease RusA	NA
UHGV-0197015_34	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0197015_34	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0197015_34	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0197015_35	KOfam	K03465	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	NA
UHGV-0197015_35	PHROG	phrog_85	thymidylate synthase	DNA, RNA and nucleotide metabolism
UHGV-0197015_35	UniRef90	UniRef90_H1CC42	Thymidylate synthase, flavin-dependent	NA
UHGV-0197015_35	eggNOG-mapper	720554.Clocl_3035	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant	NA
UHGV-0197015_35	Pfam	PF02511	Thymidylate synthase complementing protein	Thy1
UHGV-0197015_35	NCBIFam	TIGR02170.1	FAD-dependent thymidylate synthase	NA
UHGV-0197015_35	COG	COG1351	Thymidylate synthase ThyX, FAD-dependent family	NA
UHGV-0197015_35	Structural annotation	PF02511, MF_01408, TIGR02170, COG1351	NA	NA
UHGV-0197015_37	PHROG	phrog_229	MazG-like pyrophosphatase	other
UHGV-0197015_37	UniRef90	UniRef90_UPI001899D94E	nucleoside triphosphate pyrophosphohydrolase family protein	NA
UHGV-0197015_37	eggNOG-mapper	1226325.HMPREF1548_02959	MazG nucleotide pyrophosphohydrolase domain	NA
UHGV-0197015_37	Pfam	PF03819	MazG nucleotide pyrophosphohydrolase domain	MazG
UHGV-0197015_37	COG	COG1694	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	NA
UHGV-0197015_39	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0197015_39	dbAPIS	APIS033	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	NA
UHGV-0197015_41	PHROG	phrog_2045	NA	unknown function
UHGV-0197015_41	UniRef90	UniRef90_UPI001379B50A	NA	NA
UHGV-0197015_41	eggNOG-mapper	1235790.C805_00077	NA	NA
UHGV-0197015_41	Pfam	PF07505	NA	DUF5131
UHGV-0197015_41	COG	COG4422	NA	NA
UHGV-0197015_41	Structural annotation	PF07505, TIGR04471, COG4422	NA	NA
UHGV-0197015_42	Pfam	PF04448	NA	DUF551
UHGV-0197015_42	Structural annotation	NF041588	NA	NA
UHGV-0197015_43	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-0197015_43	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0197015_43	UniRef90	UniRef90_R6SWY4	PAPS_reduct domain-containing protein	NA
UHGV-0197015_43	eggNOG-mapper	1291050.JAGE01000001_gene2907	Phosphoadenosine phosphosulfate reductase	NA
UHGV-0197015_43	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0197015_43	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0197015_43	Structural annotation	PF01507, MF_00063, NF010369, COG0175	NA	NA
UHGV-0197015_48	Structural annotation	TIGR01636	NA	NA
UHGV-0197015_49	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0197015_49	PHROG	phrog_620	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0197015_49	UniRef90	UniRef90_G5FA33	ParB domain-containing protein	NA
UHGV-0197015_49	eggNOG-mapper	1232449.BAHV02000018_gene1534	NA	NA
UHGV-0197015_49	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0197015_49	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0197015_49	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0197015_49	Structural annotation	PF02195, TIGR00180, COG5119	NA	NA
UHGV-0197015_50	KOfam	K21527	mom; adenine modification enzyme [EC:2.3.1.-]	NA
UHGV-0197015_50	PHROG	phrog_1384	Mom-like DNA modification protein	other
UHGV-0197015_50	UniRef90	UniRef90_F0SQP3	Phage DNA modification protein	NA
UHGV-0197015_50	eggNOG-mapper	619693.HMPREF6745_2515	NA	NA
UHGV-0197015_50	Structural annotation	PF16092, MF_02210, NF007025, COG3818	NA	NA
UHGV-0197015_52	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0197015_52	PHROG	phrog_10250	NA	unknown function
UHGV-0197015_52	UniRef90	UniRef90_A0A8J6PA00	PBSX family phage terminase large subunit	NA
UHGV-0197015_52	eggNOG-mapper	1329516.JPST01000014_gene657	Phage terminase, large subunit	NA
UHGV-0197015_52	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0197015_52	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0197015_52	COG	COG1783	Phage terminase large subunit	NA
UHGV-0197015_52	Structural annotation	PF04466, PF20441, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0197015_53	PHROG	phrog_533	portal protein	head and packaging
UHGV-0197015_53	UniRef90	UniRef90_A0A417SPJ5	Phage portal protein	NA
UHGV-0197015_53	eggNOG-mapper	1232443.BAIA02000078_gene36	NA	NA
UHGV-0197015_53	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0197015_54	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0197015_54	UniRef90	UniRef90_A0A136WBX5	Phage minor capsid protein 2	NA
UHGV-0197015_54	eggNOG-mapper	693746.OBV_18050	Phage minor capsid protein 2	NA
UHGV-0197015_54	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0197015_54	COG	COG2369	NA	NA
UHGV-0197015_54	Structural annotation	PF06152	NA	NA
UHGV-0197015_57	PHROG	phrog_247	major head protein	head and packaging
UHGV-0197015_57	UniRef90	UniRef90_A0A3D5I8U9	Phage coat protein	NA
UHGV-0197015_57	eggNOG-mapper	1151292.QEW_4535	NA	NA
UHGV-0197015_57	COG	COG1106	ATPase/GTPase, AAA15 family	NA
UHGV-0197015_57	Structural annotation	PF20036, MF_04113, TIGR04387, COG4653	NA	NA
UHGV-0197015_58	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0197015_58	eggNOG-mapper	663278.Ethha_0495	NA	NA
UHGV-0197015_59	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0197015_59	UniRef90	UniRef90_UPI00156EFCF3	minor capsid protein	NA
UHGV-0197015_59	eggNOG-mapper	665956.HMPREF1032_03062	Minor capsid protein	NA
UHGV-0197015_59	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0197015_59	Structural annotation	PF11114	NA	NA
UHGV-0197015_60	PHROG	phrog_3266	tail completion	connector
UHGV-0197015_60	Structural annotation	PF12691	NA	NA
UHGV-0197015_61	PHROG	phrog_3099	NA	unknown function
UHGV-0197015_61	eggNOG-mapper	693746.OBV_18150	NA	NA
UHGV-0197015_61	Structural annotation	PF10772, TIGR02126, COG3499	NA	NA
UHGV-0197015_62	PHROG	phrog_11299	NA	unknown function
UHGV-0197015_62	Structural annotation	PF10666	NA	NA
UHGV-0197015_63	PHROG	phrog_706	NA	unknown function
UHGV-0197015_63	UniRef90	UniRef90_UPI00164D7633	Gp15 family bacteriophage protein	NA
UHGV-0197015_63	eggNOG-mapper	476272.RUMHYD_01784	Bacteriophage Gp15 protein	NA
UHGV-0197015_63	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0197015_63	Structural annotation	PF06854	NA	NA
UHGV-0197015_64	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0197015_64	eggNOG-mapper	1160721.RBI_II00528	Phage tail tape measure protein, TP901 family	NA
UHGV-0197015_64	COG	COG1006	Multisubunit Na+/H+ antiporter, MnhC subunit	NA
UHGV-0197015_65	PHROG	phrog_1194	NA	unknown function
UHGV-0197015_65	eggNOG-mapper	257314.LJ_0323	NA	NA
UHGV-0197015_65	Pfam	PF20458	NA	DUF6711
UHGV-0197015_65	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0197015_66	PHROG	phrog_6616	tail protein	tail
UHGV-0197015_66	eggNOG-mapper	86416.Clopa_0591	Phage minor structural protein	NA
UHGV-0197015_66	COG	COG4926	Phage-related protein	NA
UHGV-0197015_66	Structural annotation	PF14594, NF033848, COG3500	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0197015	Yes	42,974 bps	54.69%	94.29%	0.9804
UHGV-0176075	No	21,262 bps	54.48%	46.79%	0.9820