vOTU-063256

Overview

vOTU representative UHGV-1976068

No. of genomes 1

Genome length 38,599 bps

Completeness 99.90% (high-quality)

Host Faecalibacterium prausnitzii D

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-063256
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-00033 › vGENUS-00643 › vSUBGEN-31864 › vOTU-063256
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium › Faecalibacterium prausnitzii D
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1976068
BioSample	SAMN03922462
Genome length	38,599 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	61
CDS density	87.59%
tRNA count	3
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1976068_1	PHROG	phrog_9534	head protein	head and packaging
UHGV-1976068_1	eggNOG-mapper	748224.HMPREF9436_03323	COG NOG18825 non supervised orthologous group	NA
UHGV-1976068_1	Structural annotation	PF20747	NA	NA
UHGV-1976068_2	PHROG	phrog_538	minor tail protein	tail
UHGV-1976068_2	UniRef90	UniRef90_UPI0011064D4D	siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-1976068_2	eggNOG-mapper	748224.HMPREF9436_03324	NA	NA
UHGV-1976068_2	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-1976068_2	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-1976068_3	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1976068_3	UniRef90	UniRef90_UPI00130E98E0	phage tail family protein	NA
UHGV-1976068_3	eggNOG-mapper	748224.HMPREF9436_03325	Phage tail protein	NA
UHGV-1976068_3	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-1976068_4	PHROG	phrog_28775	tail length tape measure protein	tail
UHGV-1976068_4	UniRef90	UniRef90_E2ZNP7	Phage tail tape measure protein, TP901 family	NA
UHGV-1976068_4	eggNOG-mapper	748224.HMPREF9436_03326	Phage tail tape measure protein, TP901 family	NA
UHGV-1976068_4	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1976068_4	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-1976068_4	COG	COG5283	Phage-related tail protein	NA
UHGV-1976068_4	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-1976068_5	PHROG	phrog_706	NA	unknown function
UHGV-1976068_5	UniRef90	UniRef90_E2ZNP9	Bacteriophage Gp15 protein	NA
UHGV-1976068_5	eggNOG-mapper	748224.HMPREF9436_03328	Bacteriophage Gp15 protein	NA
UHGV-1976068_5	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-1976068_5	Structural annotation	PF06854	NA	NA
UHGV-1976068_6	PHROG	phrog_4450	NA	unknown function
UHGV-1976068_6	Structural annotation	PF20378	NA	NA
UHGV-1976068_7	PHROG	phrog_820	major tail protein	tail
UHGV-1976068_7	eggNOG-mapper	748224.HMPREF9436_03330	NA	NA
UHGV-1976068_7	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1976068_8	PHROG	phrog_3266	tail completion	connector
UHGV-1976068_8	UniRef90	UniRef90_UPI000D830B30	chloramphenicol resistance protein	NA
UHGV-1976068_8	eggNOG-mapper	748224.HMPREF9436_03331	NA	NA
UHGV-1976068_8	Structural annotation	PF12691	NA	NA
UHGV-1976068_9	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1976068_9	UniRef90	UniRef90_A0A2A6Z736	Capsid protein	NA
UHGV-1976068_9	eggNOG-mapper	748224.HMPREF9436_03332	Minor capsid protein	NA
UHGV-1976068_9	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-1976068_9	Structural annotation	PF11114	NA	NA
UHGV-1976068_10	PHROG	phrog_3366	NA	unknown function
UHGV-1976068_10	Structural annotation	PF20536	NA	NA
UHGV-1976068_11	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1976068_12	PHROG	phrog_10	major head protein	head and packaging
UHGV-1976068_12	UniRef90	UniRef90_A0A2A7AII3	Phage major capsid protein	NA
UHGV-1976068_12	eggNOG-mapper	1120998.AUFC01000030_gene2236	Phage capsid family	NA
UHGV-1976068_12	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1976068_12	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1976068_12	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1976068_12	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1976068_13	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-1976068_13	UniRef90	UniRef90_E6U604	Minor structural GP20 protein	NA
UHGV-1976068_13	eggNOG-mapper	663278.Ethha_0093	NA	NA
UHGV-1976068_13	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-1976068_13	Structural annotation	PF06810	NA	NA
UHGV-1976068_14	PHROG	phrog_478	site-specific recombination directionality factor RDF	integration and excision
UHGV-1976068_14	UniRef90	UniRef90_A0A373Q857	YopX domain-containing protein	NA
UHGV-1976068_14	eggNOG-mapper	1111121.HMPREF1247_0834	NA	NA
UHGV-1976068_16	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1976068_16	UniRef90	UniRef90_UPI001CBDED93	phage minor capsid protein	NA
UHGV-1976068_16	eggNOG-mapper	748224.HMPREF9436_03339	NA	NA
UHGV-1976068_16	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1976068_16	COG	COG2369	NA	NA
UHGV-1976068_16	Structural annotation	PF06152	NA	NA
UHGV-1976068_17	PHROG	phrog_533	portal protein	head and packaging
UHGV-1976068_17	UniRef90	UniRef90_E2ZNR0	Putative phage minor capsid protein	NA
UHGV-1976068_17	eggNOG-mapper	748224.HMPREF9436_03340	NA	NA
UHGV-1976068_17	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1976068_18	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1976068_18	PHROG	phrog_10250	NA	unknown function
UHGV-1976068_18	UniRef90	UniRef90_E2ZNR1	Phage terminase, large subunit, PBSX family	NA
UHGV-1976068_18	eggNOG-mapper	748224.HMPREF9436_03341	Phage terminase, large subunit, PBSX family	NA
UHGV-1976068_18	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-1976068_18	COG	COG1783	Phage terminase large subunit	NA
UHGV-1976068_18	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1976068_19	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-1976068_19	UniRef90	UniRef90_UPI000AC737F1	helix-turn-helix domain containing protein	NA
UHGV-1976068_19	eggNOG-mapper	748224.HMPREF9436_03342	transposase activity	NA
UHGV-1976068_19	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-1976068_19	Structural annotation	PF07141	NA	NA
UHGV-1976068_20	PHROG	phrog_13321	NA	unknown function
UHGV-1976068_20	UniRef90	UniRef90_E2ZNR3	Radical SAM domain protein	NA
UHGV-1976068_20	eggNOG-mapper	748224.HMPREF9436_03343	DNA photolyase activity	NA
UHGV-1976068_20	Pfam	PF04055	Radical SAM superfamily	Radical_SAM
UHGV-1976068_20	COG	COG1533	DNA repair photolyase	NA
UHGV-1976068_20	Structural annotation	PF20903, MF_00660, NF033668, COG1180	NA	NA
UHGV-1976068_21	PHROG	phrog_620	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-1976068_21	UniRef90	UniRef90_E2ZNR4	ParB domain-containing protein	NA
UHGV-1976068_21	eggNOG-mapper	748224.HMPREF9436_03344	ParB-like nuclease domain	NA
UHGV-1976068_21	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-1976068_21	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-1976068_21	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-1976068_22	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1976068_22	Structural annotation	PF07374, MF_00245, TIGR01636, COG2739	NA	NA
UHGV-1976068_23	KOfam	K03700	recU; recombination protein U	NA
UHGV-1976068_23	PHROG	phrog_843	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1976068_23	UniRef90	UniRef90_A0A1C5P0D5	Holliday junction resolvase RecU	NA
UHGV-1976068_23	eggNOG-mapper	748224.HMPREF9436_03347	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	NA
UHGV-1976068_23	Pfam	PF03838	Recombination protein U	RecU
UHGV-1976068_23	COG	COG3331	Penicillin-binding protein-related factor A, putative recombinase	NA
UHGV-1976068_23	Structural annotation	PF03838, MF_00130, NF002581, COG3331	NA	NA
UHGV-1976068_24	PHROG	phrog_3136	NA	unknown function
UHGV-1976068_24	UniRef90	UniRef90_UPI001C26B029	ASCH domain-containing protein	NA
UHGV-1976068_24	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-1976068_24	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA
UHGV-1976068_27	PHROG	phrog_3253	NA	unknown function
UHGV-1976068_27	UniRef90	UniRef90_A0A2J4JRQ6	Resolvase	NA
UHGV-1976068_27	eggNOG-mapper	1151292.QEW_3282	NA	NA
UHGV-1976068_27	Structural annotation	PF18618	NA	NA
UHGV-1976068_29	PHROG	phrog_6568	NA	unknown function
UHGV-1976068_29	eggNOG-mapper	1203606.HMPREF1526_00241	NA	NA
UHGV-1976068_33	UniRef90	UniRef90_A0A845R8R0	NA	NA
UHGV-1976068_34	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-1976068_34	UniRef90	UniRef90_E2ZNS5	Siphovirus Gp157	NA
UHGV-1976068_34	eggNOG-mapper	748224.HMPREF9436_03356	Siphovirus Gp157	NA
UHGV-1976068_34	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-1976068_34	Structural annotation	PF05565	NA	NA
UHGV-1976068_35	PHROG	phrog_15768	NA	unknown function
UHGV-1976068_35	UniRef90	UniRef90_A0A6N7TND1	NA	NA
UHGV-1976068_35	eggNOG-mapper	748224.HMPREF9436_03357	NA	NA
UHGV-1976068_35	Pfam	PF19808	NA	DUF6291
UHGV-1976068_35	Structural annotation	PF19808	NA	NA
UHGV-1976068_37	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1976068_37	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1976068_37	UniRef90	UniRef90_A0A6N7TNV3	Single-stranded DNA-binding protein	NA
UHGV-1976068_37	eggNOG-mapper	748224.HMPREF9436_03359	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-1976068_37	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1976068_37	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1976068_37	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1976068_37	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1976068_37	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-1976068_38	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1976068_38	UniRef90	UniRef90_E2ZNS9	Erf family protein	NA
UHGV-1976068_38	eggNOG-mapper	748224.HMPREF9436_03360	ERF superfamily	NA
UHGV-1976068_38	Pfam	PF04404	ERF superfamily	ERF
UHGV-1976068_38	Structural annotation	PF04404, COG4712	NA	NA
UHGV-1976068_39	PHROG	phrog_38771	NA	unknown function
UHGV-1976068_43	UniRef90	UniRef90_UPI00130EBC54	NA	NA
UHGV-1976068_43	eggNOG-mapper	445972.ANACOL_01800	NA	NA
UHGV-1976068_43	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-1976068_43	Structural annotation	PF05339, MF_00535, NF041951, COG3655	NA	NA
UHGV-1976068_44	UniRef90	UniRef90_E2ZNT7	HTH_17 domain-containing protein	NA
UHGV-1976068_44	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-1976068_45	PHROG	phrog_37083	NA	unknown function
UHGV-1976068_49	PHROG	phrog_1221	NA	unknown function
UHGV-1976068_49	UniRef90	UniRef90_E2ZNU3	Phage/plasmid-related protein TIGR03299	NA
UHGV-1976068_49	eggNOG-mapper	748224.HMPREF9436_03374	NA	NA
UHGV-1976068_49	Pfam	PF06067	NA	DUF932
UHGV-1976068_49	NCBIFam	TIGR03299.1	phage/plasmid-like protein TIGR03299	NA
UHGV-1976068_49	Structural annotation	PF06067, TIGR03299	NA	NA
UHGV-1976068_52	UniRef90	UniRef90_A0A6N7TMW8	HTH cro/C1-type domain-containing protein	NA
UHGV-1976068_52	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-1976068_53	KOfam	K15773	hipB; HTH-type transcriptional regulator / antitoxin HipB	NA
UHGV-1976068_53	PHROG	phrog_1373	transcriptional regulator	transcription regulation
UHGV-1976068_53	UniRef90	UniRef90_A0A6N7TQ25	Helix-turn-helix domain-containing protein	NA
UHGV-1976068_53	eggNOG-mapper	748224.HMPREF9436_03379	sequence-specific DNA binding	NA
UHGV-1976068_53	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1976068_53	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1976068_54	eggNOG-mapper	1280676.AUJO01000009_gene1947	NA	NA
UHGV-1976068_54	Structural annotation	PF02556, MF_00821, NF004392, COG1952	NA	NA
UHGV-1976068_56	KOfam	K14059	int; integrase	NA
UHGV-1976068_56	PHROG	phrog_1	integrase	integration and excision
UHGV-1976068_56	UniRef90	UniRef90_E2ZNV1	Site-specific recombinase, phage integrase family	NA
UHGV-1976068_56	eggNOG-mapper	748224.HMPREF9436_03382	Belongs to the 'phage' integrase family	NA
UHGV-1976068_56	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-1976068_56	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1976068_56	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1976068_56	Structural annotation	PF00589, PF14659, MF_01808, NF007246, COG4973	NA	NA
UHGV-1976068_57	PHROG	phrog_28749	NA	unknown function
UHGV-1976068_57	UniRef90	UniRef90_UPI0012DDA932	NA	NA
UHGV-1976068_57	eggNOG-mapper	748224.HMPREF9436_03383	NA	NA
UHGV-1976068_57	Pfam	PF19537	NA	DUF6061
UHGV-1976068_57	Structural annotation	PF19537	NA	NA
UHGV-1976068_58	UniRef90	UniRef90_UPI001CBC6CBB	transposase	NA
UHGV-1976068_58	eggNOG-mapper	411483.FAEPRAA2165_00409	NA	NA
UHGV-1976068_59	UniRef90	UniRef90_A0A329UQP9	Recombinase (Fragment)	NA
UHGV-1976068_59	eggNOG-mapper	411483.FAEPRAA2165_00408	NA	NA
UHGV-1976068_59	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-1976068_60	UniRef90	UniRef90_E2ZNV5	Plasmid recombination enzyme	NA
UHGV-1976068_60	eggNOG-mapper	748224.HMPREF9436_03386	NA	NA
UHGV-1976068_60	Pfam	PF01076	Plasmid recombination enzyme	Mob_Pre
UHGV-1976068_60	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-1976068_60	Structural annotation	PF01076, NF041497, NF038178	NA	NA
UHGV-1976068_61	PHROG	phrog_864	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-1976068_61	UniRef90	UniRef90_D4K8Y0	Phage/plasmid primase, P4 family, C-terminal domain	NA
UHGV-1976068_61	eggNOG-mapper	657322.FPR_09510	Phage plasmid primase, P4 family	NA
UHGV-1976068_61	Pfam	PF19263	NA	DUF5906
UHGV-1976068_61	COG	COG3378	DNA primase, phage- or plasmid-associated	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1976068	Yes	38,599 bps	55.28%	99.90%	0.9752