vOTU-063257

Overview

vOTU representative UHGV-0194106

No. of genomes 2

Genome length 40,397 bps

Completeness 95.88% (high-quality)

Host Roseburia inulinivorans

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-063257
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 › vSUBFAM-00152 › vGENUS-00084 › vSUBGEN-31865 › vOTU-063257
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Roseburia › Roseburia inulinivorans
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0194106
BioSample	SAMN00993243
Genome length	40,397 bps
CheckV completeness	95.88% (high-quality)
CheckV contamination	0.00%
CDS count	71
CDS density	90.12%
tRNA count	2
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0194106_1	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0194106_1	PHROG	phrog_435	endolysin	lysis
UHGV-0194106_1	UniRef90	UniRef90_A0A1Q6KUK5	SPOR domain-containing protein	NA
UHGV-0194106_1	eggNOG-mapper	33035.JPJF01000090_gene96	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	NA
UHGV-0194106_1	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0194106_1	Pfam	PF05036	SPOR domain	SPOR
UHGV-0194106_1	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0194106_1	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-0194106_2	PHROG	phrog_881	holin	lysis
UHGV-0194106_2	UniRef90	UniRef90_UPI00189D3A4F	phage holin	NA
UHGV-0194106_2	eggNOG-mapper	476272.RUMHYD_01966	Putative phage holin Dp-1	NA
UHGV-0194106_2	Pfam	PF16938	Putative phage holin Dp-1	Phage_holin_Dp1
UHGV-0194106_2	Structural annotation	PF16938	NA	NA
UHGV-0194106_3	PHROG	phrog_937	hemolysin	other
UHGV-0194106_3	UniRef90	UniRef90_R5GGW2	Phosphoglucosamine mutase	NA
UHGV-0194106_3	eggNOG-mapper	1298920.KI911353_gene2670	NA	NA
UHGV-0194106_4	PHROG	phrog_6465	tail protein	tail
UHGV-0194106_4	UniRef90	UniRef90_A2F9B0	Gp1-related protein	NA
UHGV-0194106_4	eggNOG-mapper	1399942.U3PFX4_9CAUD	peptidoglycan catabolic process	NA
UHGV-0194106_5	PHROG	phrog_18725	NA	unknown function
UHGV-0194106_5	eggNOG-mapper	1226322.HMPREF1545_00062	NA	NA
UHGV-0194106_7	PHROG	phrog_13879	NA	unknown function
UHGV-0194106_7	eggNOG-mapper	1120746.CCNL01000014_gene2107	NA	NA
UHGV-0194106_7	Structural annotation	PF14594, PF03256, NF033848, COG4379, COG5156	NA	NA
UHGV-0194106_8	PHROG	phrog_1194	NA	unknown function
UHGV-0194106_8	eggNOG-mapper	1120746.CCNL01000014_gene2106	NA	NA
UHGV-0194106_8	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-0194106_9	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0194106_9	eggNOG-mapper	1235800.C819_00476	tape measure	NA
UHGV-0194106_9	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0194106_10	PHROG	phrog_706	NA	unknown function
UHGV-0194106_10	UniRef90	UniRef90_C7GBZ7	Bacteriophage Gp15 protein	NA
UHGV-0194106_10	eggNOG-mapper	1235790.C805_00084	Bacteriophage Gp15 protein	NA
UHGV-0194106_10	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0194106_10	Structural annotation	PF06854	NA	NA
UHGV-0194106_11	UniRef90	UniRef90_A0A412KF72	RNA polymerase subunit sigma	NA
UHGV-0194106_11	Pfam	PF20378	NA	DUF6673
UHGV-0194106_11	Structural annotation	PF10666	NA	NA
UHGV-0194106_12	PHROG	phrog_3099	NA	unknown function
UHGV-0194106_12	eggNOG-mapper	1235790.C805_00082	NA	NA
UHGV-0194106_12	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0194106_13	Structural annotation	PF12691	NA	NA
UHGV-0194106_14	PHROG	phrog_3366	NA	unknown function
UHGV-0194106_14	eggNOG-mapper	1235790.C805_00078	NA	NA
UHGV-0194106_14	Structural annotation	PF20536, COG5614	NA	NA
UHGV-0194106_15	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0194106_15	eggNOG-mapper	476272.RUMHYD_01778	NA	NA
UHGV-0194106_16	PHROG	phrog_544	major head protein	head and packaging
UHGV-0194106_16	UniRef90	UniRef90_A0A395X7A1	S-l_SbsC_C domain-containing protein	NA
UHGV-0194106_16	eggNOG-mapper	476272.RUMHYD_01776	NA	NA
UHGV-0194106_16	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0194106_17	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0194106_17	UniRef90	UniRef90_UPI000E538A87	phage scaffolding protein	NA
UHGV-0194106_17	eggNOG-mapper	476272.RUMHYD_01775	COG NOG36366 non supervised orthologous group	NA
UHGV-0194106_17	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0194106_19	PHROG	phrog_1233	NA	unknown function
UHGV-0194106_19	eggNOG-mapper	397290.C810_01336	NA	NA
UHGV-0194106_19	Structural annotation	PF20352, COG2856	NA	NA
UHGV-0194106_20	eggNOG-mapper	658655.HMPREF0988_00915	NA	NA
UHGV-0194106_21	PHROG	phrog_20016	NA	unknown function
UHGV-0194106_21	UniRef90	UniRef90_A0A2Z4QB67	Carbohydrate binding domain/collagen triple helix repeat protein	NA
UHGV-0194106_21	eggNOG-mapper	397290.C810_05214	NA	NA
UHGV-0194106_21	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0194106_22	PHROG	phrog_16490	NA	unknown function
UHGV-0194106_22	eggNOG-mapper	397290.C810_01328	NA	NA
UHGV-0194106_23	eggNOG-mapper	658655.HMPREF0988_00918	NA	NA
UHGV-0194106_24	eggNOG-mapper	658655.HMPREF0988_00919	NA	NA
UHGV-0194106_25	eggNOG-mapper	1235790.C805_00057	NA	NA
UHGV-0194106_25	Structural annotation	PF04545, MF_00674, NF001067, COG1342	NA	NA
UHGV-0194106_26	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0194106_26	UniRef90	UniRef90_A0A6L5YIK0	Phage capsid protein	NA
UHGV-0194106_26	eggNOG-mapper	645991.Sgly_0338	NA	NA
UHGV-0194106_26	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0194106_26	COG	COG2369	NA	NA
UHGV-0194106_26	Structural annotation	PF06152	NA	NA
UHGV-0194106_27	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0194106_27	UniRef90	UniRef90_UPI000E4A8F9F	minor capsid protein	NA
UHGV-0194106_27	eggNOG-mapper	1449050.JNLE01000003_gene3886	NA	NA
UHGV-0194106_27	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0194106_29	PHROG	phrog_533	portal protein	head and packaging
UHGV-0194106_29	UniRef90	UniRef90_A0A3R5WTT1	Phage capsid protein	NA
UHGV-0194106_29	eggNOG-mapper	476272.RUMHYD_01758	phage minor capsid protein	NA
UHGV-0194106_29	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0194106_30	PHROG	phrog_1233	NA	unknown function
UHGV-0194106_30	eggNOG-mapper	1120978.KB894086_gene458	NA	NA
UHGV-0194106_30	Structural annotation	PF13058	NA	NA
UHGV-0194106_31	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0194106_31	PHROG	phrog_5653	terminase large subunit	head and packaging
UHGV-0194106_31	UniRef90	UniRef90_A0A3R5WSV0	Terminase_3 domain-containing protein	NA
UHGV-0194106_31	eggNOG-mapper	33035.JPJF01000106_gene3136	Terminase small subunit	NA
UHGV-0194106_31	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0194106_31	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0194106_31	COG	COG1783	Phage terminase large subunit	NA
UHGV-0194106_31	Structural annotation	PF04466, PF17288, PF03592, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0194106_32	PHROG	phrog_33130	NA	unknown function
UHGV-0194106_32	UniRef90	UniRef90_A0A3B9CD52	S1-like domain-containing protein	NA
UHGV-0194106_32	Structural annotation	PF10922	NA	NA
UHGV-0194106_35	KOfam	K07727	K07727; putative transcriptional regulator	NA
UHGV-0194106_35	UniRef90	UniRef90_A0A3R5WW48	XRE family transcriptional regulator	NA
UHGV-0194106_35	eggNOG-mapper	1235799.C818_04243	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0194106_35	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0194106_35	Structural annotation	PF13443, NF000090, COG3655	NA	NA
UHGV-0194106_37	COG	COG3170	Type IV pilus assembly protein FimV	NA
UHGV-0194106_38	UniRef90	UniRef90_A0A412KFA7	ABC transporter ATP-binding protein	NA
UHGV-0194106_43	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0194106_43	UniRef90	UniRef90_A0A2H4JC51	Putative 3'-phosphoadenosine 5'-phosphosulfatesulfotransferase/FAD synthetase-related enzyme	NA
UHGV-0194106_43	eggNOG-mapper	693746.OBV_43240	NA	NA
UHGV-0194106_43	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0194106_43	Structural annotation	PF01507, MF_00064, TIGR00434, COG0175	NA	NA
UHGV-0194106_44	UniRef90	UniRef90_UPI001C01D3C5	NA	NA
UHGV-0194106_44	eggNOG-mapper	622312.ROSEINA2194_04464	NA	NA
UHGV-0194106_44	Pfam	PF14199	NA	DUF4317
UHGV-0194106_44	Structural annotation	PF14199, MF_00730, NF001557, COG3081	NA	NA
UHGV-0194106_45	PHROG	phrog_874	NA	unknown function
UHGV-0194106_45	UniRef90	UniRef90_A0A4P6LRJ9	ASCH domain-containing protein	NA
UHGV-0194106_45	eggNOG-mapper	411468.CLOSCI_00298	NA	NA
UHGV-0194106_45	Structural annotation	PF04266, MF_00684, NF003443, COG4043	NA	NA
UHGV-0194106_47	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-0194106_47	UniRef90	UniRef90_A0A412KFB8	Restriction alleviation protein, Lar family	NA
UHGV-0194106_47	eggNOG-mapper	1235790.C805_00069	Restriction alleviation protein Lar	NA
UHGV-0194106_47	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0194106_47	NCBIFam	TIGR03655.1	Lar family restriction alleviation protein	NA
UHGV-0194106_47	Structural annotation	PF14354, TIGR03655	NA	NA
UHGV-0194106_48	PHROG	phrog_16351	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0194106_49	PHROG	phrog_8684	NA	unknown function
UHGV-0194106_49	UniRef90	UniRef90_A0A6L6XDP0	YopX domain-containing protein	NA
UHGV-0194106_49	eggNOG-mapper	411470.RUMGNA_02199	NA	NA
UHGV-0194106_49	Pfam	PF09643	YopX protein	YopX
UHGV-0194106_49	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0194106_49	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0194106_51	PHROG	phrog_38832	NA	unknown function
UHGV-0194106_51	eggNOG-mapper	397290.C810_01492	NA	NA
UHGV-0194106_53	PHROG	phrog_10455	NA	unknown function
UHGV-0194106_53	UniRef90	UniRef90_R7N9Z9	Conserved domain protein	NA
UHGV-0194106_56	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-0194106_56	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0194106_56	UniRef90	UniRef90_A0A1Q6KIH9	IstB_IS21 domain-containing protein	NA
UHGV-0194106_56	eggNOG-mapper	742733.HMPREF9469_01844	IstB-like ATP binding protein	NA
UHGV-0194106_56	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-0194106_56	COG	COG1484	DNA replication protein DnaC	NA
UHGV-0194106_56	Structural annotation	PF01695, MF_00377, NF005992, COG1484	NA	NA
UHGV-0194106_57	PHROG	phrog_2514	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0194106_57	UniRef90	UniRef90_A0A174WT25	Replication initiator A domain-containing protein	NA
UHGV-0194106_57	eggNOG-mapper	742733.HMPREF9469_01845	NA	NA
UHGV-0194106_57	Structural annotation	PF10771, MF_01177, TIGR01714, COG5529	NA	NA
UHGV-0194106_58	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0194106_58	PHROG	phrog_1682	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0194106_58	UniRef90	UniRef90_A0A6N3H631	Endodeoxyribonuclease RusA	NA
UHGV-0194106_58	eggNOG-mapper	1399942.U3PDU0_9CAUD	magnesium ion binding	NA
UHGV-0194106_58	Structural annotation	PF19595, NF007305, COG4570	NA	NA
UHGV-0194106_59	PHROG	phrog_373	anti-repressor	transcription regulation
UHGV-0194106_59	UniRef90	UniRef90_UPI0018A6ABED	Rha family transcriptional regulator	NA
UHGV-0194106_59	eggNOG-mapper	1499683.CCFF01000014_gene3944	ORF6C domain	NA
UHGV-0194106_59	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0194106_59	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-0194106_59	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-0194106_59	COG	COG3646	Phage regulatory protein Rha	NA
UHGV-0194106_59	Structural annotation	PF10552, PF09669, TIGR02681, COG3646	NA	NA
UHGV-0194106_60	PHROG	phrog_398	NA	unknown function
UHGV-0194106_60	UniRef90	UniRef90_UPI001E5E0390	putative HNHc nuclease	NA
UHGV-0194106_60	eggNOG-mapper	33035.JPJF01000122_gene2462	Putative HNHc nuclease	NA
UHGV-0194106_60	Pfam	PF16784	Putative HNHc nuclease	HNHc_6
UHGV-0194106_60	Structural annotation	PF16784	NA	NA
UHGV-0194106_61	PHROG	phrog_14970	NA	unknown function
UHGV-0194106_61	eggNOG-mapper	1235798.C817_00385	double-strand break repair protein	NA
UHGV-0194106_61	Pfam	PF04098	Rad52/22 family double-strand break repair protein	Rad52_Rad22
UHGV-0194106_61	COG	COG4712	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	NA
UHGV-0194106_61	Structural annotation	PF04098, TIGR00607, COG4712	NA	NA
UHGV-0194106_63	Structural annotation	PF15513, NF007469	NA	NA
UHGV-0194106_65	Structural annotation	PF11127	NA	NA
UHGV-0194106_68	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0194106_68	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0194106_68	UniRef90	UniRef90_A0A1Q6KIG7	Transcriptional regulator	NA
UHGV-0194106_68	eggNOG-mapper	1235797.C816_03553	DNA-binding helix-turn-helix protein	NA
UHGV-0194106_68	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0194106_68	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0194106_68	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0194106_68	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0194106_70	KOfam	K19370	DNAJC22; DnaJ homolog subfamily C member 22	NA
UHGV-0194106_70	PHROG	phrog_10292	NA	unknown function
UHGV-0194106_70	UniRef90	UniRef90_A0A1Q6KIC5	TM2 domain-containing protein	NA
UHGV-0194106_70	eggNOG-mapper	665956.HMPREF1032_00562	TM2 domain	NA
UHGV-0194106_70	Pfam	PF05154	TM2 domain	TM2
UHGV-0194106_70	COG	COG2314	NA	NA
UHGV-0194106_71	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0194106_71	PHROG	phrog_95	integrase	integration and excision
UHGV-0194106_71	UniRef90	UniRef90_A0A1Q6KI87	Resolvase/invertase-type recombinase catalytic domain-containing protein	NA
UHGV-0194106_71	eggNOG-mapper	180332.JTGN01000010_gene4488	Resolvase, N terminal domain	NA
UHGV-0194106_71	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0194106_71	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0194106_71	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0194106_71	Structural annotation	PF00239, PF13408, PF14235, NF041201, COG1961, COG1579	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0194106	Yes	40,397 bps	38.42%	95.88%	0.9786
UHGV-0130004	No	40,223 bps	38.45%	95.47%	0.9745