vOTU-063565

Overview

vOTU representative UHGV-2198427

No. of genomes 4

Genome length 31,508 bps

Completeness 95.36% (high-quality)

Host Ruminococcus E sp003526955

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-063565
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-00239 › vGENUS-10753 › vSUBGEN-14525 › vOTU-063565
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › Ruminococcus E › Ruminococcus E sp003526955
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2198427
BioSample	SAMEA2737864
Genome length	31,508 bps
CheckV completeness	95.36% (high-quality)
CheckV contamination	0.00%
CDS count	49
CDS density	92.12%
tRNA count	2
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2198427_1	UniRef90	UniRef90_A0A412ULX9	XRE family transcriptional regulator	NA
UHGV-2198427_1	eggNOG-mapper	411459.RUMOBE_01706	NA	NA
UHGV-2198427_1	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2198427_2	PHROG	phrog_199	holin	lysis
UHGV-2198427_2	UniRef90	UniRef90_UPI00164BD6C2	phage holin family protein	NA
UHGV-2198427_2	eggNOG-mapper	1160721.RBI_I01565	Bacteriophage holin family	NA
UHGV-2198427_2	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-2198427_2	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-2198427_2	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-2198427_2	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-2198427_3	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-2198427_3	PHROG	phrog_20388	endolysin	lysis
UHGV-2198427_3	UniRef90	UniRef90_UPI00189BF4F0	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2198427_3	eggNOG-mapper	1203606.HMPREF1526_00253	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2198427_3	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-2198427_3	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2198427_3	Structural annotation	PF01510, PF01471, MF_04111, NF008758, COG5632, COG3409	NA	NA
UHGV-2198427_4	Structural annotation	PF10651, PF01095	NA	NA
UHGV-2198427_5	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-2198427_5	UniRef90	UniRef90_A0A348ZBV6	Prophage_tail domain-containing protein	NA
UHGV-2198427_5	eggNOG-mapper	1160721.RBI_I01574	Prophage endopeptidase tail	NA
UHGV-2198427_5	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-2198427_5	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-2198427_5	COG	COG4926	Phage-related protein	NA
UHGV-2198427_5	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-2198427_6	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-2198427_6	UniRef90	UniRef90_UPI00189E4294	phage tail family protein	NA
UHGV-2198427_6	eggNOG-mapper	1160721.RBI_I01575	Phage tail protein	NA
UHGV-2198427_6	COG	COG4722	Phage-related protein YomH	NA
UHGV-2198427_6	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-2198427_7	PHROG	phrog_23464	NA	unknown function
UHGV-2198427_7	eggNOG-mapper	665950.HMPREF1025_02660	phage tail tape measure protein	NA
UHGV-2198427_7	COG	COG5283	Phage-related tail protein	NA
UHGV-2198427_7	Structural annotation	COG3941	NA	NA
UHGV-2198427_8	PHROG	phrog_23464	NA	unknown function
UHGV-2198427_8	eggNOG-mapper	457396.CSBG_01057	tape measure	NA
UHGV-2198427_8	COG	COG5283	Phage-related tail protein	NA
UHGV-2198427_10	eggNOG-mapper	272562.CA_C0058	NA	NA
UHGV-2198427_11	PHROG	phrog_885	major tail protein	tail
UHGV-2198427_11	UniRef90	UniRef90_A0A3D3W9F4	CBM_X2 domain-containing protein	NA
UHGV-2198427_11	eggNOG-mapper	1321814.HMPREF9089_00935	NA	NA
UHGV-2198427_11	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-2198427_12	Structural annotation	PF12691	NA	NA
UHGV-2198427_13	UniRef90	UniRef90_UPI001A9B6FBF	HK97 gp10 family phage protein	NA
UHGV-2198427_13	eggNOG-mapper	1414720.CBYM010000040_gene1650	NA	NA
UHGV-2198427_13	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-2198427_13	Structural annotation	TIGR01725	NA	NA
UHGV-2198427_14	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-2198427_14	UniRef90	UniRef90_A0A374MZF9	Phage head-tail adapter protein	NA
UHGV-2198427_14	eggNOG-mapper	1414720.CBYM010000040_gene1649	head-tail adaptor	NA
UHGV-2198427_14	COG	COG5614	Phage head-tail adaptor	NA
UHGV-2198427_14	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2198427_15	PHROG	phrog_5223	neck protein	connector
UHGV-2198427_15	eggNOG-mapper	931626.Awo_c31020	NA	NA
UHGV-2198427_15	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-2198427_15	Structural annotation	TIGR01560	NA	NA
UHGV-2198427_16	PHROG	phrog_10	major head protein	head and packaging
UHGV-2198427_16	UniRef90	UniRef90_A0A374N9V9	Phage major capsid protein	NA
UHGV-2198427_16	eggNOG-mapper	1280689.AUJC01000011_gene1521	Phage major capsid protein, HK97 family	NA
UHGV-2198427_16	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2198427_16	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2198427_16	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2198427_16	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2198427_17	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-2198427_17	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-2198427_17	UniRef90	UniRef90_A0A374NBM3	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-2198427_17	eggNOG-mapper	1203606.HMPREF1526_00979	Belongs to the peptidase S14 family	NA
UHGV-2198427_17	Pfam	PF00574	Clp protease	CLP_protease
UHGV-2198427_17	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-2198427_17	Structural annotation	PF00574, MF_00444, NF011091, COG0740	NA	NA
UHGV-2198427_18	PHROG	phrog_12	portal protein	head and packaging
UHGV-2198427_18	UniRef90	UniRef90_A0A374NAE1	Phage portal protein	NA
UHGV-2198427_18	eggNOG-mapper	626523.GCWU000342_01027	Portal protein	NA
UHGV-2198427_18	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2198427_18	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2198427_18	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2198427_19	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2198427_19	UniRef90	UniRef90_A0A374NB45	Terminase large subunit	NA
UHGV-2198427_19	eggNOG-mapper	1235793.C809_01917	Phage Terminase	NA
UHGV-2198427_19	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2198427_19	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2198427_19	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2198427_19	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-2198427_20	PHROG	phrog_1066	NA	unknown function
UHGV-2198427_20	UniRef90	UniRef90_A0A0D0SQQ8	NA	NA
UHGV-2198427_20	eggNOG-mapper	1203606.HMPREF1526_00982	NA	NA
UHGV-2198427_21	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2198427_21	UniRef90	UniRef90_A0A374N9T6	HNH endonuclease	NA
UHGV-2198427_21	eggNOG-mapper	1235793.C809_01915	HNH endonuclease	NA
UHGV-2198427_21	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2198427_21	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2198427_22	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2198427_22	UniRef90	UniRef90_A0A412LC59	XRE family transcriptional regulator	NA
UHGV-2198427_22	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2198427_22	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2198427_22	Structural annotation	PF01381, NF007257, COG3655	NA	NA
UHGV-2198427_24	Structural annotation	PF14282, COG5570	NA	NA
UHGV-2198427_25	Structural annotation	NF041288, COG4830	NA	NA
UHGV-2198427_26	PHROG	phrog_2118	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2198427_26	UniRef90	UniRef90_A0A374DVG7	HNH endonuclease	NA
UHGV-2198427_26	eggNOG-mapper	610130.Closa_0730	HNH endonuclease	NA
UHGV-2198427_26	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2198427_26	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2198427_26	Structural annotation	TIGR02646, COG1403	NA	NA
UHGV-2198427_28	PHROG	phrog_25754	NA	unknown function
UHGV-2198427_28	eggNOG-mapper	97139.C824_00736	NA	NA
UHGV-2198427_28	Structural annotation	PF10842, MF_00436, TIGR02383	NA	NA
UHGV-2198427_29	PHROG	phrog_22543	NA	unknown function
UHGV-2198427_30	Structural annotation	PF08141, MF_00667, TIGR02861, COG0231	NA	NA
UHGV-2198427_31	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-2198427_31	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-2198427_31	UniRef90	UniRef90_A0A374US90	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-2198427_31	eggNOG-mapper	411462.DORLON_00806	Endodeoxyribonuclease RusA	NA
UHGV-2198427_31	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-2198427_31	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-2198427_31	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-2198427_32	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-2198427_32	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-2198427_32	UniRef90	UniRef90_A0A374UPV4	Bac_DnaA domain-containing protein	NA
UHGV-2198427_32	eggNOG-mapper	445972.ANACOL_01829	NA	NA
UHGV-2198427_32	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-2198427_32	COG	COG1484	DNA replication protein DnaC	NA
UHGV-2198427_32	Structural annotation	PF01695, MF_01158, NF005378, COG1484	NA	NA
UHGV-2198427_33	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2198427_33	UniRef90	UniRef90_A0A374US31	NA	NA
UHGV-2198427_33	eggNOG-mapper	1232449.BAHV02000016_gene1836	NA	NA
UHGV-2198427_33	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-2198427_33	COG	COG3935	DNA replication protein DnaD	NA
UHGV-2198427_33	Structural annotation	PF14297	NA	NA
UHGV-2198427_34	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-2198427_34	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-2198427_34	UniRef90	UniRef90_A0A373XYI8	MBL fold metallo-hydrolase	NA
UHGV-2198427_34	eggNOG-mapper	665956.HMPREF1032_03101	May be involved in the transport of PQQ or its precursor to the periplasm	NA
UHGV-2198427_34	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-2198427_34	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-2198427_34	Structural annotation	PF12706, MF_01818, TIGR03307, COG1234	NA	NA
UHGV-2198427_35	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-2198427_35	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-2198427_35	UniRef90	UniRef90_A0A374N9W0	Recombinase	NA
UHGV-2198427_35	eggNOG-mapper	1095750.HMPREF9970_1675	RecT family	NA
UHGV-2198427_35	Pfam	PF03837	RecT family	RecT
UHGV-2198427_35	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-2198427_35	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-2198427_35	Structural annotation	PF03837, TIGR00616, COG3723	NA	NA
UHGV-2198427_36	PHROG	phrog_674	NA	unknown function
UHGV-2198427_36	UniRef90	UniRef90_A0A374N9T8	NA	NA
UHGV-2198427_36	eggNOG-mapper	1408437.JNJN01000039_gene373	NA	NA
UHGV-2198427_36	Pfam	PF07083	NA	DUF1351
UHGV-2198427_36	Structural annotation	PF07083	NA	NA
UHGV-2198427_42	PHROG	phrog_6058	NA	unknown function
UHGV-2198427_42	Structural annotation	NF033787	NA	NA
UHGV-2198427_44	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-2198427_44	UniRef90	UniRef90_A0A374MYQ7	XRE family transcriptional regulator	NA
UHGV-2198427_44	eggNOG-mapper	411470.RUMGNA_00191	DNA-binding helix-turn-helix protein	NA
UHGV-2198427_44	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-2198427_44	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2198427_44	Structural annotation	PF01381, MF_00535, NF007257, COG1476	NA	NA
UHGV-2198427_46	UniRef90	UniRef90_A0A374DTF3	NA	NA
UHGV-2198427_47	KOfam	K14059	int; integrase	NA
UHGV-2198427_47	PHROG	phrog_1	integrase	integration and excision
UHGV-2198427_47	UniRef90	UniRef90_A0A1G5CL52	Phage integrase family protein	NA
UHGV-2198427_47	eggNOG-mapper	693746.OBV_41260	Belongs to the 'phage' integrase family	NA
UHGV-2198427_47	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2198427_47	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-2198427_47	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-2198427_48	KOfam	K01494	dcd; dCTP deaminase [EC:3.5.4.13]	NA
UHGV-2198427_48	UniRef90	UniRef90_A0A4R2TWB3	Deoxycytidine triphosphate deaminase	NA
UHGV-2198427_48	eggNOG-mapper	931626.Awo_c14420	Belongs to the dCTP deaminase family	NA
UHGV-2198427_48	COG	COG0717	dCTP deaminase	NA
UHGV-2198427_49	KOfam	K01493	comEB; dCMP deaminase [EC:3.5.4.12]	NA
UHGV-2198427_49	PHROG	phrog_8118	NA	unknown function
UHGV-2198427_49	UniRef90	UniRef90_A0A417NAQ7	CMP/dCMP-type deaminase domain-containing protein	NA
UHGV-2198427_49	eggNOG-mapper	515620.EUBELI_20475	Cytidine and deoxycytidylate deaminase zinc-binding region	NA
UHGV-2198427_49	PADLOC	dCTPase	NA	NA
UHGV-2198427_49	Pfam	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region	dCMP_cyt_deam_1
UHGV-2198427_49	COG	COG2131	Deoxycytidylate deaminase	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2198427	Yes	31,508 bps	39.20%	95.36%	0.9782
UHGV-1390995	No	31,472 bps	39.23%	95.87%	0.9776
UHGV-0074467	No	27,986 bps	40.52%	85.25%	0.9792
UHGV-0183854	No	24,353 bps	40.79%	61.31%	0.9784