vOTU-063706

Overview

vOTU representative UHGV-1992294

No. of genomes 2

Genome length 35,454 bps

Completeness 99.90% (high-quality)

Host Ruminococcus E bromii B

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-063706
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00134 › vGENUS-00111 › vSUBGEN-19320 › vOTU-063706
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › Ruminococcus E › Ruminococcus E bromii B
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-1992294
BioSample	NA
Genome length	35,454 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	51
CDS density	89.83%
tRNA count	1
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1992294_3	PHROG	phrog_10678	NA	unknown function
UHGV-1992294_4	UniRef90	UniRef90_A0A412ULX9	XRE family transcriptional regulator	NA
UHGV-1992294_4	eggNOG-mapper	679200.HMPREF9333_02253	Helix-turn-helix XRE-family like proteins	NA
UHGV-1992294_4	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1992294_4	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-1992294_4	Structural annotation	PF01381, NF040522, COG2944	NA	NA
UHGV-1992294_5	PHROG	phrog_13260	NA	unknown function
UHGV-1992294_5	UniRef90	UniRef90_A0A3R5TCR3	FunZ	NA
UHGV-1992294_5	eggNOG-mapper	572479.Hprae_1054	NA	NA
UHGV-1992294_5	Structural annotation	PF20703, MF_01407, NF001624, COG1474	NA	NA
UHGV-1992294_6	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1992294_6	PHROG	phrog_20388	endolysin	lysis
UHGV-1992294_6	UniRef90	UniRef90_A0A374N1L8	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1992294_6	eggNOG-mapper	1203606.HMPREF1526_00253	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1992294_6	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-1992294_6	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-1992294_6	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1992294_6	Structural annotation	PF01510, PF01476, PF15591, MF_02014, MF_04111, MF_01354, NF008758, NF010723, TIGR00405, COG3023, COG5004, COG2139	NA	NA
UHGV-1992294_7	PHROG	phrog_881	holin	lysis
UHGV-1992294_7	UniRef90	UniRef90_A0A4Q7P349	Dp-1 family holin	NA
UHGV-1992294_7	eggNOG-mapper	742740.HMPREF9474_02251	Putative phage holin Dp-1	NA
UHGV-1992294_7	Pfam	PF16938	Putative phage holin Dp-1	Phage_holin_Dp1
UHGV-1992294_7	Structural annotation	PF16938	NA	NA
UHGV-1992294_8	UniRef90	UniRef90_A0A374MYZ3	Branched-chain amino acid ABC transporter permease	NA
UHGV-1992294_8	eggNOG-mapper	1007096.BAGW01000032_gene1580	NA	NA
UHGV-1992294_10	UniRef90	UniRef90_A0A374N9Y2	NA	NA
UHGV-1992294_10	Structural annotation	PF10651, PF08931, TIGR02268	NA	NA
UHGV-1992294_11	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-1992294_11	UniRef90	UniRef90_A0A1G5CPD2	Phage minor structural protein, N-terminal region	NA
UHGV-1992294_11	eggNOG-mapper	1567011.A0A0A7RUI9_9VIRU	N-acetylmuramoyl-L-alanine amidase activity	NA
UHGV-1992294_11	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1992294_11	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-1992294_11	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-1992294_12	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1992294_12	UniRef90	UniRef90_A0A1G5CPA2	Phage-related protein	NA
UHGV-1992294_12	COG	COG4722	Phage-related protein YomH	NA
UHGV-1992294_12	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-1992294_13	PHROG	phrog_5218	NA	unknown function
UHGV-1992294_13	UniRef90	UniRef90_UPI000E474EFE	phage tail tape measure protein	NA
UHGV-1992294_13	eggNOG-mapper	908340.HMPREF9406_2570	Phage tail tape measure protein TP901	NA
UHGV-1992294_13	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1992294_13	COG	COG5280	Phage-related minor tail protein	NA
UHGV-1992294_13	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-1992294_14	Structural annotation	PF11836	NA	NA
UHGV-1992294_15	PHROG	phrog_88	major tail protein	tail
UHGV-1992294_15	UniRef90	UniRef90_A0A1G5CNS8	Phage major tail protein, phi13 family	NA
UHGV-1992294_15	eggNOG-mapper	1321782.HMPREF1986_01362	phage major tail protein, phi13 family	NA
UHGV-1992294_15	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-1992294_15	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-1992294_16	UniRef90	UniRef90_UPI000E5564A4	HK97 gp10 family phage protein	NA
UHGV-1992294_16	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1992294_16	Structural annotation	TIGR01725	NA	NA
UHGV-1992294_17	eggNOG-mapper	272623.L59277	NA	NA
UHGV-1992294_17	Structural annotation	PF05657, MF_00281, COG0016	NA	NA
UHGV-1992294_18	PHROG	phrog_19734	NA	unknown function
UHGV-1992294_18	eggNOG-mapper	86416.Clopa_0343	NA	NA
UHGV-1992294_18	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-1992294_18	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-1992294_19	PHROG	phrog_749	NA	unknown function
UHGV-1992294_19	UniRef90	UniRef90_A0A1G5CMX8	Phage gp6-like head-tail connector protein	NA
UHGV-1992294_19	eggNOG-mapper	1211817.CCAT010000053_gene2133	NA	NA
UHGV-1992294_20	PHROG	phrog_10	major head protein	head and packaging
UHGV-1992294_20	UniRef90	UniRef90_A0A412ULW9	Phage major capsid protein	NA
UHGV-1992294_20	eggNOG-mapper	1211817.CCAT010000053_gene2132	Phage capsid family	NA
UHGV-1992294_20	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1992294_20	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1992294_20	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1992294_20	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1992294_21	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-1992294_21	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-1992294_21	UniRef90	UniRef90_A0A412ULU1	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-1992294_21	eggNOG-mapper	86416.Clopa_0340	Belongs to the peptidase S14 family	NA
UHGV-1992294_21	Pfam	PF00574	Clp protease	CLP_protease
UHGV-1992294_21	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-1992294_21	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-1992294_22	PHROG	phrog_12	portal protein	head and packaging
UHGV-1992294_22	UniRef90	UniRef90_A0A412ULV9	Phage portal protein	NA
UHGV-1992294_22	eggNOG-mapper	1415774.U728_1254	Phage portal protein	NA
UHGV-1992294_22	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1992294_22	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-1992294_22	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1992294_22	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-1992294_23	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1992294_23	UniRef90	UniRef90_A0A412UM03	Terminase large subunit	NA
UHGV-1992294_23	eggNOG-mapper	86416.Clopa_0337	Phage Terminase	NA
UHGV-1992294_23	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1992294_23	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1992294_23	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1992294_23	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-1992294_24	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-1992294_24	UniRef90	UniRef90_UPI00057D0A7C	P27 family phage terminase small subunit	NA
UHGV-1992294_24	eggNOG-mapper	1211817.CCAT010000053_gene2128	NA	NA
UHGV-1992294_24	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-1992294_24	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-1992294_25	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1992294_25	UniRef90	UniRef90_A0A412ULY9	HNH endonuclease	NA
UHGV-1992294_25	eggNOG-mapper	1158607.UAU_01026	HNH endonuclease	NA
UHGV-1992294_25	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1992294_25	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1992294_26	eggNOG-mapper	431943.CKL_4074	NA	NA
UHGV-1992294_26	Structural annotation	TIGR01636	NA	NA
UHGV-1992294_27	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1992294_27	eggNOG-mapper	1235800.C819_00515	NA	NA
UHGV-1992294_27	Structural annotation	PF21578, NF041486	NA	NA
UHGV-1992294_30	PHROG	phrog_824	NA	unknown function
UHGV-1992294_30	UniRef90	UniRef90_A0A3D3D6C6	VRR-NUC domain-containing protein	NA
UHGV-1992294_30	eggNOG-mapper	397288.C806_00096	VRR_NUC	NA
UHGV-1992294_30	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-1992294_30	Structural annotation	PF08774	NA	NA
UHGV-1992294_31	PHROG	phrog_24518	NA	unknown function
UHGV-1992294_31	eggNOG-mapper	1519439.JPJG01000077_gene922	NA	NA
UHGV-1992294_33	PHROG	phrog_30343	NA	unknown function
UHGV-1992294_33	UniRef90	UniRef90_UPI0019620485	GNAT family N-acetyltransferase	NA
UHGV-1992294_33	eggNOG-mapper	411473.RUMCAL_00285	NA	NA
UHGV-1992294_33	Structural annotation	PF11039, MF_02210, TIGR03585, COG1670	NA	NA
UHGV-1992294_34	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-1992294_34	PHROG	phrog_1	integrase	integration and excision
UHGV-1992294_34	UniRef90	UniRef90_UPI001B3C6404	tyrosine-type recombinase/integrase	NA
UHGV-1992294_34	eggNOG-mapper	397291.C804_01139	Phage integrase, N-terminal SAM-like domain	NA
UHGV-1992294_34	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1992294_34	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-1992294_34	Structural annotation	PF00589, MF_01808, TIGR02224, COG4974	NA	NA
UHGV-1992294_36	PHROG	phrog_323	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1992294_36	UniRef90	UniRef90_UPI001C01CFF8	SANT/Myb domain-containing protein	NA
UHGV-1992294_36	eggNOG-mapper	394503.Ccel_3305	SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains	NA
UHGV-1992294_36	dbAPIS	APIS006	Trigger programmed cell death (PCD) by P4 prophage.	NA
UHGV-1992294_36	Structural annotation	PF11112, NF040595	NA	NA
UHGV-1992294_37	KOfam	K03427	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	NA
UHGV-1992294_37	PHROG	phrog_5696	NA	unknown function
UHGV-1992294_37	UniRef90	UniRef90_UPI001B3C9C54	N-6 DNA methylase	NA
UHGV-1992294_37	eggNOG-mapper	397291.C804_06560	N-6 DNA Methylase	NA
UHGV-1992294_37	Pfam	PF02384	N-6 DNA Methylase	N6_Mtase
UHGV-1992294_37	COG	COG0286	Type I restriction-modification system, DNA methylase subunit	NA
UHGV-1992294_37	Structural annotation	COG0286	NA	NA
UHGV-1992294_40	Structural annotation	COG1862	NA	NA
UHGV-1992294_41	PHROG	phrog_6058	NA	unknown function
UHGV-1992294_41	Structural annotation	NF033787	NA	NA
UHGV-1992294_42	PHROG	phrog_8684	NA	unknown function
UHGV-1992294_42	UniRef90	UniRef90_UPI000E48855B	YopX family protein	NA
UHGV-1992294_42	eggNOG-mapper	1450694.BTS2_0501	YopX protein	NA
UHGV-1992294_42	Pfam	PF09643	YopX protein	YopX
UHGV-1992294_42	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-1992294_42	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-1992294_47	UniRef90	UniRef90_A0A374N1V0	NA	NA
UHGV-1992294_47	eggNOG-mapper	171693.BN988_01635	NA	NA
UHGV-1992294_47	Pfam	PF05339	NA	DUF739
UHGV-1992294_47	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-1992294_47	Structural annotation	PF05339, NF002773, COG1476	NA	NA
UHGV-1992294_48	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-1992294_48	UniRef90	UniRef90_A0A374ND72	Transcriptional regulator	NA
UHGV-1992294_48	eggNOG-mapper	457412.RSAG_00795	sequence-specific DNA binding	NA
UHGV-1992294_48	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1992294_48	Structural annotation	PF13560, MF_00535, NF007257, COG3655	NA	NA
UHGV-1992294_49	PHROG	phrog_1914	NA	unknown function
UHGV-1992294_49	UniRef90	UniRef90_A0A374NDM7	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-1992294_49	eggNOG-mapper	1160721.RBI_I01604	NA	NA
UHGV-1992294_49	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-1992294_49	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-1992294_49	Structural annotation	PF06114, COG2856	NA	NA
UHGV-1992294_50	UniRef90	UniRef90_UPI000E52DA24	zinc ribbon domain-containing protein	NA
UHGV-1992294_50	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-1992294_50	Structural annotation	PF18933, PF02883, MF_02248, NF008627, COG5435, COG2847	NA	NA
UHGV-1992294_51	KOfam	K14059	int; integrase	NA
UHGV-1992294_51	PHROG	phrog_1	integrase	integration and excision
UHGV-1992294_51	UniRef90	UniRef90_A0A1G5CL52	Phage integrase family protein	NA
UHGV-1992294_51	eggNOG-mapper	693746.OBV_41260	Belongs to the 'phage' integrase family	NA
UHGV-1992294_51	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1992294_51	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-1992294_51	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1992294	Yes	35,454 bps	38.55%	99.90%	0.9744
UHGV-0410714	No	25,820 bps	39.38%	73.39%	0.9790