vOTU-064241

Overview

No. of genomes 2

Genome length 37,958 bps

Completeness 99.90% (high-quality)

Host ERR7738594 bin.178

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-064241
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-02859 › vGENUS-03765 › vSUBGEN-12328 › vOTU-064241
Host taxonomy	Bacteria › Firmicutes › Bacilli › RF39 › UBA660 › CAG-533 › ERR7738594 bin.178
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0007375
BioSample	NA
Genome length	37,958 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	59
CDS density	92.58%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0007375_1	KOfam	K07273	acm; lysozyme	NA
UHGV-0007375_1	PHROG	phrog_291	endolysin	lysis
UHGV-0007375_1	UniRef90	UniRef90_UPI0018E40569	LysM peptidoglycan-binding domain-containing protein	NA
UHGV-0007375_1	eggNOG-mapper	1120933.ATUY01000004_gene1004	lysozyme activity	NA
UHGV-0007375_1	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0007375_1	Pfam	PF08230	CW_7 repeat	CW_7
UHGV-0007375_1	Pfam	PF01476	LysM domain	LysM
UHGV-0007375_1	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-0007375_1	Structural annotation	PF01183, PF08230, COG3757	NA	NA
UHGV-0007375_4	PHROG	phrog_4912	tail fiber assembly	tail
UHGV-0007375_4	Pfam	PF16778	Phage tail assembly chaperone protein	Phage_tail_APC
UHGV-0007375_4	Structural annotation	PF16778	NA	NA
UHGV-0007375_5	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-0007375_5	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-0007375_5	UniRef90	UniRef90_A0A7X0LXI1	Reverse transcriptase domain-containing protein	NA
UHGV-0007375_5	eggNOG-mapper	755164.D6PSR5_9CAUD	RNA-directed DNA polymerase activity	NA
UHGV-0007375_5	PADLOC	icity0040	RT (reverse transcriptase)	CRISPR-CAS
UHGV-0007375_5	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-0007375_5	Structural annotation	PF00078, MF_01390, TIGR04416, COG3344	NA	NA
UHGV-0007375_6	PHROG	phrog_5302	tail protein	tail
UHGV-0007375_6	UniRef90	UniRef90_A0A845LFH6	BppU family phage baseplate upper protein	NA
UHGV-0007375_6	eggNOG-mapper	411470.RUMGNA_00248	Phage tail-collar fibre protein	NA
UHGV-0007375_6	Pfam	PF18454	Major tropism determinant N-terminal domain	Mtd_N
UHGV-0007375_6	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0007375_6	Structural annotation	PF18454	NA	NA
UHGV-0007375_9	PHROG	phrog_372	tail protein	tail
UHGV-0007375_9	UniRef90	UniRef90_UPI0011A8433B	NA	NA
UHGV-0007375_9	eggNOG-mapper	207656.S6B662_9CAUD	N-acetylmuramoyl-L-alanine amidase activity	NA
UHGV-0007375_9	Pfam	PF05895	NA	DUF859
UHGV-0007375_9	Structural annotation	PF05895, MF_04116, NF010681, COG3401	NA	NA
UHGV-0007375_10	PHROG	phrog_2929	tail fiber protein	tail
UHGV-0007375_10	UniRef90	UniRef90_UPI0011A0F2A8	phage tail protein	NA
UHGV-0007375_10	eggNOG-mapper	469596.HMPREF9488_01330	NA	NA
UHGV-0007375_10	Pfam	PF04862	NA	DUF642
UHGV-0007375_12	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0007375_12	UniRef90	UniRef90_A0A3D9GHV1	Phage-related protein	NA
UHGV-0007375_12	eggNOG-mapper	394503.Ccel_3035	phage tail tape measure protein	NA
UHGV-0007375_12	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0007375_12	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0007375_13	PHROG	phrog_706	NA	unknown function
UHGV-0007375_13	UniRef90	UniRef90_UPI000CF9A546	Gp15 family bacteriophage protein	NA
UHGV-0007375_13	eggNOG-mapper	632245.CLP_1656	Bacteriophage Gp15 protein	NA
UHGV-0007375_13	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0007375_13	Structural annotation	PF06854	NA	NA
UHGV-0007375_15	PHROG	phrog_820	major tail protein	tail
UHGV-0007375_15	UniRef90	UniRef90_UPI001CDC884F	capsid protein	NA
UHGV-0007375_15	eggNOG-mapper	1231057.AMGD01000018_gene3613	Belongs to the glycosyl hydrolase family 6	NA
UHGV-0007375_15	COG	COG5492	NA	NA
UHGV-0007375_15	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0007375_16	PHROG	phrog_913	minor head protein	head and packaging
UHGV-0007375_17	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0007375_17	UniRef90	UniRef90_A0A413FZ75	Minor capsid protein	NA
UHGV-0007375_17	eggNOG-mapper	552396.HMPREF0863_00274	Minor capsid protein	NA
UHGV-0007375_17	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0007375_17	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-0007375_18	PHROG	phrog_3366	NA	unknown function
UHGV-0007375_18	eggNOG-mapper	632245.CLP_1651	NA	NA
UHGV-0007375_18	Pfam	PF10665	Minor capsid protein	Minor_capsid_1
UHGV-0007375_18	Structural annotation	PF20536, TIGR01563	NA	NA
UHGV-0007375_19	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0007375_19	eggNOG-mapper	997296.PB1_16199	NA	NA
UHGV-0007375_22	PHROG	phrog_212	major head protein	head and packaging
UHGV-0007375_22	UniRef90	UniRef90_A0A2N2DPS1	Phage capsid protein	NA
UHGV-0007375_22	eggNOG-mapper	1122918.KB907248_gene4499	NA	NA
UHGV-0007375_22	Structural annotation	PF05065, MF_04119, NF041162, COG4653	NA	NA
UHGV-0007375_23	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0007375_23	UniRef90	UniRef90_UPI00088D90B8	phage scaffolding protein	NA
UHGV-0007375_23	eggNOG-mapper	743719.PaelaDRAFT_2399	Phage minor structural protein GP20	NA
UHGV-0007375_23	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0007375_23	Structural annotation	PF06810	NA	NA
UHGV-0007375_24	Structural annotation	PF07073, MF_01077, NF037951, COG4568	NA	NA
UHGV-0007375_25	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0007375_25	UniRef90	UniRef90_R5XZV2	Protein gp4	NA
UHGV-0007375_25	eggNOG-mapper	525255.HMPREF0077_0390	Phage minor capsid protein 2	NA
UHGV-0007375_25	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0007375_25	Pfam	PF15542	Bacterial toxin 50	Ntox50
UHGV-0007375_25	COG	COG2369	NA	NA
UHGV-0007375_25	Structural annotation	PF06152, PF15542	NA	NA
UHGV-0007375_26	PHROG	phrog_533	portal protein	head and packaging
UHGV-0007375_26	UniRef90	UniRef90_UPI001F061150	phage portal protein	NA
UHGV-0007375_26	eggNOG-mapper	428127.EUBDOL_01228	phage minor capsid protein	NA
UHGV-0007375_26	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0007375_27	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0007375_27	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0007375_27	UniRef90	UniRef90_R6DVT6	Phage terminase large subunit PBSX family	NA
UHGV-0007375_27	eggNOG-mapper	1120998.AUFC01000030_gene2231	Phage terminase, large subunit, PBSX family	NA
UHGV-0007375_27	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0007375_27	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0007375_27	COG	COG1783	Phage terminase large subunit	NA
UHGV-0007375_27	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0007375_28	UniRef90	UniRef90_A0A353JAA0	Terminase_3 domain-containing protein (Fragment)	NA
UHGV-0007375_28	eggNOG-mapper	428125.CLOLEP_01805	NA	NA
UHGV-0007375_31	Structural annotation	PF04545, MF_00674, NF008895, COG1595	NA	NA
UHGV-0007375_46	PHROG	phrog_7370	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0007375_46	UniRef90	UniRef90_A0A7K3ZA74	HNH endonuclease	NA
UHGV-0007375_46	eggNOG-mapper	1232449.BAHV02000016_gene1841	HNH nucleases	NA
UHGV-0007375_47	PHROG	phrog_25509	NA	unknown function
UHGV-0007375_48	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0007375_48	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0007375_48	UniRef90	UniRef90_A0A3N9TNM5	Single-stranded DNA-binding protein	NA
UHGV-0007375_48	eggNOG-mapper	1443125.Z962_06925	Single-stranded DNA-binding protein	NA
UHGV-0007375_48	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0007375_48	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0007375_48	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0007375_48	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0007375_48	Structural annotation	PF00436, MF_00984, NF005242, COG0629	NA	NA
UHGV-0007375_50	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0007375_50	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0007375_50	UniRef90	UniRef90_R6E1Z6	Recombinase phage RecT family	NA
UHGV-0007375_50	eggNOG-mapper	1095750.HMPREF9970_1675	RecT family	NA
UHGV-0007375_50	Pfam	PF03837	RecT family	RecT
UHGV-0007375_50	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-0007375_50	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0007375_50	Structural annotation	PF03837, TIGR00616, COG3723	NA	NA
UHGV-0007375_51	PHROG	phrog_674	NA	unknown function
UHGV-0007375_51	UniRef90	UniRef90_A0A4P9C8L7	NA	NA
UHGV-0007375_51	eggNOG-mapper	1121441.AUCX01000014_gene537	NA	NA
UHGV-0007375_51	Pfam	PF07083	NA	DUF1351
UHGV-0007375_51	Structural annotation	PF07083	NA	NA
UHGV-0007375_52	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0007375_52	UniRef90	UniRef90_A0A7X5DCK8	Recombinase	NA
UHGV-0007375_52	eggNOG-mapper	1121441.AUCX01000014_gene536	YqaJ-like viral recombinase domain	NA
UHGV-0007375_52	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0007375_52	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-0007375_52	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0007375_52	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0007375_53	PHROG	phrog_2514	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0007375_53	UniRef90	UniRef90_L5N8S4	DnaB_2 domain-containing protein	NA
UHGV-0007375_53	eggNOG-mapper	742733.HMPREF9469_01845	NA	NA
UHGV-0007375_53	Structural annotation	PF10771, MF_01177, TIGR01714, COG3935	NA	NA
UHGV-0007375_56	UniRef90	UniRef90_UPI0004801E75	helix-turn-helix transcriptional regulator	NA
UHGV-0007375_56	eggNOG-mapper	926692.AZYG01000066_gene2149	NA	NA
UHGV-0007375_56	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0007375_56	Structural annotation	PF05339, NF007271, COG3655	NA	NA
UHGV-0007375_57	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0007375_57	UniRef90	UniRef90_A0A7V2ANN3	XRE family transcriptional regulator	NA
UHGV-0007375_57	eggNOG-mapper	293826.Amet_2390	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	NA
UHGV-0007375_57	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0007375_57	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0007375_59	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0007375_59	PHROG	phrog_95	integrase	integration and excision
UHGV-0007375_59	UniRef90	UniRef90_R6HPK6	Resolvase	NA
UHGV-0007375_59	eggNOG-mapper	1128398.Curi_c22150	Resolvase, N terminal domain	NA
UHGV-0007375_59	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0007375_59	Pfam	PF07508	Recombinase	Recombinase
UHGV-0007375_59	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0007375_59	Structural annotation	PF07508, PF00239, PF05384, NF041201, COG1961	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0007375	Yes	37,958 bps	32.29%	99.90%	0.9796
UHGV-1500548	No	33,417 bps	32.36%	88.59%	0.9790