vOTU-064298

Overview

No. of genomes 2

Genome length 38,986 bps

Completeness 99.90% (high-quality)

Host UBA660

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-064298
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00025 › vSUBFAM-00630 › vGENUS-03363 › vSUBGEN-18784 › vOTU-064298
Host taxonomy	Bacteria › Firmicutes › Bacilli › RF39 › UBA660
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0003163
BioSample	SAMEA4766039
Genome length	38,986 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	76
CDS density	92.20%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0003163_1	KOfam	K14059	int; integrase	NA
UHGV-0003163_1	PHROG	phrog_1	integrase	integration and excision
UHGV-0003163_1	UniRef90	UniRef90_A0A843GV89	Site-specific integrase	NA
UHGV-0003163_1	eggNOG-mapper	1123263.AUKY01000086_gene1008	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0003163_1	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0003163_1	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0003163_1	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0003163_3	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0003163_3	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0003163_3	UniRef90	UniRef90_A0A353JBB9	HTH cro/C1-type domain-containing protein	NA
UHGV-0003163_3	eggNOG-mapper	153721.MYP_1445	sequence-specific DNA binding	NA
UHGV-0003163_3	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0003163_3	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0003163_3	Structural annotation	PF12844, MF_00535, NF041951, COG1476	NA	NA
UHGV-0003163_4	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0003163_4	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0003163_4	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0003163_7	Structural annotation	PF11372	NA	NA
UHGV-0003163_9	Pfam	PF19808	NA	DUF6291
UHGV-0003163_10	KOfam	K02086	dnaD; DNA replication protein	NA
UHGV-0003163_10	PHROG	phrog_4016	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0003163_10	UniRef90	UniRef90_R5A158	DnaD domain protein	NA
UHGV-0003163_10	eggNOG-mapper	1123299.AUKZ01000018_gene209	Replication initiation and membrane attachment	NA
UHGV-0003163_10	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-0003163_10	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-0003163_10	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0003163_10	Structural annotation	PF19808, PF07261, TIGR01446, COG3935	NA	NA
UHGV-0003163_11	Structural annotation	PF11417, PF08209	NA	NA
UHGV-0003163_12	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0003163_12	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0003163_12	UniRef90	UniRef90_A0A7X6XCF8	Single-stranded DNA-binding protein	NA
UHGV-0003163_12	eggNOG-mapper	1541959.KQ51_01279	Single-strand binding protein family	NA
UHGV-0003163_12	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0003163_12	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0003163_12	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0003163_14	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0003163_14	UniRef90	UniRef90_UPI000F63F93F	ERF family protein	NA
UHGV-0003163_14	eggNOG-mapper	1415775.U729_2586	ERF superfamily	NA
UHGV-0003163_14	Pfam	PF04404	ERF superfamily	ERF
UHGV-0003163_14	Structural annotation	PF04404, COG4712	NA	NA
UHGV-0003163_15	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0003163_15	UniRef90	UniRef90_A0A350H2L7	YqaJ domain-containing protein	NA
UHGV-0003163_15	eggNOG-mapper	1122146.AUHP01000010_gene1042	YqaJ viral recombinase family	NA
UHGV-0003163_15	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0003163_15	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0003163_15	Structural annotation	PF10926, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0003163_17	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0003163_17	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0003163_17	UniRef90	UniRef90_A0A846ZU98	Single-stranded DNA-binding protein	NA
UHGV-0003163_17	eggNOG-mapper	720554.Clocl_4133	Single-stranded DNA-binding protein	NA
UHGV-0003163_17	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0003163_17	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0003163_17	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0003163_17	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0003163_17	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0003163_18	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0003163_18	eggNOG-mapper	1408437.JNJN01000039_gene370	NA	NA
UHGV-0003163_18	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0003163_21	PHROG	phrog_2044	RNA polymerase beta subunit	DNA, RNA and nucleotide metabolism
UHGV-0003163_21	eggNOG-mapper	796940.HMPREF9628_00162	NA	NA
UHGV-0003163_21	Structural annotation	MF_00337, NF010671, COG1722	NA	NA
UHGV-0003163_22	PHROG	phrog_1891	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0003163_22	UniRef90	UniRef90_R7FAF4	NA	NA
UHGV-0003163_22	eggNOG-mapper	293826.Amet_2599	HNH endonuclease	NA
UHGV-0003163_22	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0003163_22	Structural annotation	PF13392	NA	NA
UHGV-0003163_24	Structural annotation	PF02559, MF_01194, TIGR02097	NA	NA
UHGV-0003163_25	PHROG	phrog_803	host nuclease inhibitor	moron, auxiliary metabolic gene and host takeover
UHGV-0003163_25	UniRef90	UniRef90_R7IG32	Orf31	NA
UHGV-0003163_25	eggNOG-mapper	1229517.AMFD01000018_gene199	NA	NA
UHGV-0003163_36	Structural annotation	PF17340	NA	NA
UHGV-0003163_41	PHROG	phrog_625	NA	unknown function
UHGV-0003163_41	UniRef90	UniRef90_A0A395V9H0	ASCH domain-containing protein	NA
UHGV-0003163_41	eggNOG-mapper	1235800.C819_02245	NA	NA
UHGV-0003163_41	Structural annotation	PF12961	NA	NA
UHGV-0003163_45	PHROG	phrog_7839	NA	unknown function
UHGV-0003163_45	eggNOG-mapper	202954.BBNK01000034_gene3794	NA	NA
UHGV-0003163_46	Structural annotation	PF15456	NA	NA
UHGV-0003163_48	Structural annotation	PF10922	NA	NA
UHGV-0003163_49	UniRef90	UniRef90_A0A353JAA0	Terminase_3 domain-containing protein (Fragment)	NA
UHGV-0003163_49	eggNOG-mapper	428125.CLOLEP_01805	NA	NA
UHGV-0003163_49	Pfam	PF13518	Helix-turn-helix domain	HTH_28
UHGV-0003163_50	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0003163_50	PHROG	phrog_10250	NA	unknown function
UHGV-0003163_50	UniRef90	UniRef90_A0A3B8SL24	PBSX family phage terminase large subunit	NA
UHGV-0003163_50	eggNOG-mapper	428127.EUBDOL_01229	Phage terminase, large subunit, PBSX family	NA
UHGV-0003163_50	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0003163_50	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0003163_50	COG	COG1783	Phage terminase large subunit	NA
UHGV-0003163_50	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0003163_51	PHROG	phrog_533	portal protein	head and packaging
UHGV-0003163_51	UniRef90	UniRef90_R6Y8H1	Minor capsid protein	NA
UHGV-0003163_51	eggNOG-mapper	545697.HMPREF0216_02845	NA	NA
UHGV-0003163_51	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0003163_51	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0003163_52	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0003163_52	UniRef90	UniRef90_R5XZV2	Protein gp4	NA
UHGV-0003163_52	eggNOG-mapper	642492.Clole_0816	NA	NA
UHGV-0003163_52	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0003163_52	COG	COG2369	NA	NA
UHGV-0003163_52	Structural annotation	PF06152	NA	NA
UHGV-0003163_55	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0003163_55	UniRef90	UniRef90_UPI001C1258D3	phage scaffolding protein	NA
UHGV-0003163_55	eggNOG-mapper	536233.CLO_0885	Phage minor structural protein GP20	NA
UHGV-0003163_55	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0003163_55	Structural annotation	PF06810, MF_02110	NA	NA
UHGV-0003163_56	PHROG	phrog_422	major head protein	head and packaging
UHGV-0003163_56	UniRef90	UniRef90_W0U896	Phage major capsid protein	NA
UHGV-0003163_56	eggNOG-mapper	679192.HMPREF9013_1301	NA	NA
UHGV-0003163_56	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0003163_58	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0003163_58	UniRef90	UniRef90_A0A371AQT0	NA	NA
UHGV-0003163_58	eggNOG-mapper	1449050.JNLE01000003_gene3888	NA	NA
UHGV-0003163_59	PHROG	phrog_3366	NA	unknown function
UHGV-0003163_59	Structural annotation	PF20536	NA	NA
UHGV-0003163_60	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0003163_60	UniRef90	UniRef90_UPI00067E9657	minor capsid protein	NA
UHGV-0003163_60	eggNOG-mapper	642492.Clole_0824	Minor capsid protein	NA
UHGV-0003163_60	Structural annotation	PF11114	NA	NA
UHGV-0003163_61	PHROG	phrog_3266	tail completion	connector
UHGV-0003163_61	eggNOG-mapper	525255.HMPREF0077_0380	NA	NA
UHGV-0003163_61	Structural annotation	PF12691	NA	NA
UHGV-0003163_62	PHROG	phrog_3099	NA	unknown function
UHGV-0003163_62	eggNOG-mapper	1232449.BAHV02000010_gene2720	NA	NA
UHGV-0003163_63	Structural annotation	PF10666	NA	NA
UHGV-0003163_64	PHROG	phrog_706	NA	unknown function
UHGV-0003163_64	UniRef90	UniRef90_UPI000C7695B7	Gp15 family bacteriophage protein	NA
UHGV-0003163_64	eggNOG-mapper	645991.Sgly_0348	Bacteriophage Gp15 protein	NA
UHGV-0003163_64	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0003163_64	Structural annotation	PF06854	NA	NA
UHGV-0003163_65	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0003163_65	UniRef90	UniRef90_A0A810PX76	Phage tail tape measure protein	NA
UHGV-0003163_65	eggNOG-mapper	1120746.CCNL01000014_gene2105	tape measure	NA
UHGV-0003163_65	COG	COG1511	NA	NA
UHGV-0003163_66	Structural annotation	PF20458, TIGR02126, COG5437	NA	NA
UHGV-0003163_67	Structural annotation	PF14594, NF033848, COG3500	NA	NA
UHGV-0003163_68	PHROG	phrog_372	tail protein	tail
UHGV-0003163_68	UniRef90	UniRef90_UPI0018E46574	NA	NA
UHGV-0003163_68	Structural annotation	PF05895, MF_04116, NF010681, COG3291, COG2967	NA	NA
UHGV-0003163_70	Structural annotation	PF18573, NF033147, COG4935	NA	NA
UHGV-0003163_74	PHROG	phrog_443	holin	lysis
UHGV-0003163_74	UniRef90	UniRef90_A0A2U2ELA1	Membrane protein	NA
UHGV-0003163_74	eggNOG-mapper	1211844.CBLM010000023_gene976	Putative lactococcus lactis phage r1t holin	NA
UHGV-0003163_74	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-0003163_74	Structural annotation	PF16945	NA	NA
UHGV-0003163_75	PHROG	phrog_7698	endolysin	lysis
UHGV-0003163_75	UniRef90	UniRef90_R6IVV6	Possible cell wall-binding protein	NA
UHGV-0003163_75	eggNOG-mapper	525254.HMPREF0072_1273	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	NA
UHGV-0003163_75	Pfam	PF08230	CW_7 repeat	CW_7
UHGV-0003163_75	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0003163_75	Structural annotation	PF08230	NA	NA
UHGV-0003163_76	PHROG	phrog_7566	NA	unknown function

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0003163	Yes	38,986 bps	27.31%	99.90%	0.9668
UHGV-0000870	No	38,394 bps	27.32%	99.90%	0.9713