vOTU-064482

Overview

vOTU representative UHGV-1452007

No. of genomes 2

Genome length 36,930 bps

Completeness 99.90% (high-quality)

Host Clostridium P ventriculi

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-064482
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-03086 › vGENUS-04224 › vSUBGEN-04684 › vOTU-064482
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Clostridiales › Clostridiaceae › Clostridium P › Clostridium P ventriculi
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1452007
BioSample	NA
Genome length	36,930 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	48
CDS density	87.98%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1452007_1	PHROG	phrog_4151	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1452007_1	UniRef90	UniRef90_A0A316S8M2	RNA polymerase subunit sigma-70	NA
UHGV-1452007_1	eggNOG-mapper	1211817.CCAT010000008_gene938	Phage terminase, small subunit	NA
UHGV-1452007_1	Pfam	PF10668	Phage terminase small subunit	Phage_terminase
UHGV-1452007_1	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-1452007_1	COG	COG5484	NA	NA
UHGV-1452007_1	Structural annotation	PF05119, PF06056, TIGR01558, COG3747	NA	NA
UHGV-1452007_2	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1452007_2	UniRef90	UniRef90_UPI000543D394	terminase large subunit	NA
UHGV-1452007_2	eggNOG-mapper	1235798.C817_02581	Phage terminase-like protein large subunit	NA
UHGV-1452007_2	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1452007_2	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1452007_2	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1452007_2	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-1452007_3	PHROG	phrog_12	portal protein	head and packaging
UHGV-1452007_3	UniRef90	UniRef90_UPI00164CC1C1	phage portal protein	NA
UHGV-1452007_3	eggNOG-mapper	349161.Dred_2606	Phage portal protein, HK97 family	NA
UHGV-1452007_3	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1452007_3	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-1452007_3	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1452007_3	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-1452007_4	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-1452007_4	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-1452007_4	UniRef90	UniRef90_UPI00110724D9	Clp protease ClpP	NA
UHGV-1452007_4	eggNOG-mapper	1232452.BAIB02000007_gene1626	Belongs to the peptidase S14 family	NA
UHGV-1452007_4	Pfam	PF00574	Clp protease	CLP_protease
UHGV-1452007_4	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-1452007_4	Structural annotation	PF00574, MF_00444, TIGR00493, COG0740	NA	NA
UHGV-1452007_5	PHROG	phrog_10	major head protein	head and packaging
UHGV-1452007_5	UniRef90	UniRef90_UPI00164AB0C3	phage major capsid protein	NA
UHGV-1452007_5	eggNOG-mapper	1211817.CCAT010000053_gene2132	Phage capsid family	NA
UHGV-1452007_5	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1452007_5	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1452007_5	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1452007_5	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1452007_6	PHROG	phrog_749	NA	unknown function
UHGV-1452007_6	UniRef90	UniRef90_A0A1I3QJG6	Phage gp6-like head-tail connector protein	NA
UHGV-1452007_6	eggNOG-mapper	1139219.I569_00234	NA	NA
UHGV-1452007_7	PHROG	phrog_11176	head-tail adaptor	connector
UHGV-1452007_7	UniRef90	UniRef90_E2ELI7	Putative phage head-tail adaptor	NA
UHGV-1452007_7	eggNOG-mapper	1158607.UAU_01034	NA	NA
UHGV-1452007_7	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-1452007_7	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-1452007_7	Structural annotation	PF05521, PF07405, TIGR01563, COG5614	NA	NA
UHGV-1452007_8	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1452007_8	eggNOG-mapper	1499684.CCNP01000020_gene2283	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-1452007_8	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1452007_8	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-1452007_8	Structural annotation	TIGR01725	NA	NA
UHGV-1452007_9	Structural annotation	PF05657, NF040576, COG3167	NA	NA
UHGV-1452007_10	PHROG	phrog_88	major tail protein	tail
UHGV-1452007_10	UniRef90	UniRef90_B1V2P3	Phage major tail protein, Phi13 family	NA
UHGV-1452007_10	eggNOG-mapper	536233.CLO_1368	phage major tail protein, phi13 family	NA
UHGV-1452007_10	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-1452007_10	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-1452007_11	eggNOG-mapper	1476973.JMMB01000007_gene1770	NA	NA
UHGV-1452007_12	KOfam	K16551	AKAP9, AKAP350; A-kinase anchor protein 9	NA
UHGV-1452007_12	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-1452007_12	UniRef90	UniRef90_B1V2P5	Putative phage tail tape measure protein, family, core region domain protein	NA
UHGV-1452007_12	eggNOG-mapper	1151292.QEW_0351	Phage-related minor tail protein	NA
UHGV-1452007_12	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1452007_12	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-1452007_12	COG	COG5283	Phage-related tail protein	NA
UHGV-1452007_12	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-1452007_13	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1452007_13	UniRef90	UniRef90_UPI0018E49AA5	phage tail family protein	NA
UHGV-1452007_13	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-1452007_13	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-1452007_13	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-1452007_13	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-1452007_14	PHROG	phrog_13289	tail protein	tail
UHGV-1452007_14	UniRef90	UniRef90_UPI0018E4D1D2	phage tail protein	NA
UHGV-1452007_14	eggNOG-mapper	1151292.QEW_4523	Phage minor structural protein	NA
UHGV-1452007_14	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1452007_14	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-1452007_14	COG	COG4733	Phage-related protein, tail protein J	NA
UHGV-1452007_16	KOfam	K10457	KLHL20, KLEIP; kelch-like protein 20	NA
UHGV-1452007_16	PHROG	phrog_35286	NA	unknown function
UHGV-1452007_16	eggNOG-mapper	1151292.QEW_4521	Collagen triple helix repeat (20 copies)	NA
UHGV-1452007_16	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-1452007_16	Pfam	PF13854	Kelch motif	Kelch_5
UHGV-1452007_16	Pfam	PF01344	Kelch motif	Kelch_1
UHGV-1452007_16	Pfam	PF13415	Galactose oxidase, central domain	Kelch_3
UHGV-1452007_16	COG	COG1520	Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat	NA
UHGV-1452007_17	PHROG	phrog_11837	NA	unknown function
UHGV-1452007_18	NCBIFam	NF040910.1	CD1375 family protein	NA
UHGV-1452007_18	Structural annotation	NF040910	NA	NA
UHGV-1452007_19	PHROG	phrog_199	holin	lysis
UHGV-1452007_19	UniRef90	UniRef90_UPI00073F5B1F	phage holin family protein	NA
UHGV-1452007_19	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1452007_19	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1452007_19	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-1452007_19	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1452007_20	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1452007_20	PHROG	phrog_670	endolysin	lysis
UHGV-1452007_20	UniRef90	UniRef90_UPI0009EA7BE7	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1452007_20	eggNOG-mapper	641107.CDLVIII_1361	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1452007_20	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-1452007_20	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-1452007_20	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-1452007_21	PHROG	phrog_2277	NA	unknown function
UHGV-1452007_21	eggNOG-mapper	1027396.LMOSA_9780	NA	NA
UHGV-1452007_23	KOfam	K07171	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	NA
UHGV-1452007_23	UniRef90	UniRef90_A0A2D6KF74	PemK family transcriptional regulator	NA
UHGV-1452007_23	eggNOG-mapper	1476973.JMMB01000007_gene3200	Toxic component of a toxin-antitoxin (TA) module	NA
UHGV-1452007_23	Pfam	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
UHGV-1452007_23	COG	COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	NA
UHGV-1452007_24	UniRef90	UniRef90_UPI0018AB7309	RICIN domain-containing protein	NA
UHGV-1452007_24	Pfam	PF14200	Ricin-type beta-trefoil lectin domain-like	RicinB_lectin_2
UHGV-1452007_25	KOfam	K07496	K07496; putative transposase	NA
UHGV-1452007_25	PHROG	phrog_506	transposase	integration and excision
UHGV-1452007_25	UniRef90	UniRef90_UPI0018CFF878	RNA-guided endonuclease TnpB family protein	NA
UHGV-1452007_25	eggNOG-mapper	431943.CKL_3092	Putative transposase DNA-binding domain	NA
UHGV-1452007_25	PADLOC	Type_V_V_U3	Cas12	CRISPR-CAS
UHGV-1452007_25	Pfam	PF01385	Probable transposase	OrfB_IS605
UHGV-1452007_25	Pfam	PF07282	Putative transposase DNA-binding domain	OrfB_Zn_ribbon
UHGV-1452007_25	NCBIFam	NF040570.1	RNA-guided endonuclease TnpB family protein	NA
UHGV-1452007_25	COG	COG0675	Transposase	NA
UHGV-1452007_25	Structural annotation	PF07282, PF01385, NF038281, COG0675	NA	NA
UHGV-1452007_26	PHROG	phrog_8263	NA	unknown function
UHGV-1452007_26	UniRef90	UniRef90_A0A8F3T064	VanZ family protein	NA
UHGV-1452007_26	eggNOG-mapper	1145276.T479_16120	NA	NA
UHGV-1452007_27	PHROG	phrog_18939	NA	unknown function
UHGV-1452007_28	PHROG	phrog_14312	NA	unknown function
UHGV-1452007_29	KOfam	K03466	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	NA
UHGV-1452007_29	PHROG	phrog_1358	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UHGV-1452007_29	UniRef90	UniRef90_A0A7T0GMF4	FtsK domain-containing protein	NA
UHGV-1452007_29	eggNOG-mapper	545697.HMPREF0216_01772	FtsK/SpoIIIE family	NA
UHGV-1452007_29	PADLOC	SspH_00004	SspH	SSP
UHGV-1452007_29	Pfam	PF01580	FtsK/SpoIIIE family	FtsK_SpoIIIE
UHGV-1452007_29	COG	COG1674	DNA segregation ATPase FtsK/SpoIIIE or related protein	NA
UHGV-1452007_31	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1452007_31	UniRef90	UniRef90_A0A2U3Q6R6	GTP cyclohydrolase II	NA
UHGV-1452007_31	eggNOG-mapper	398525.KB900701_gene7662	HNH nucleases	NA
UHGV-1452007_33	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-1452007_33	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1452007_33	UniRef90	UniRef90_UPI0009EC2495	helix-turn-helix transcriptional regulator	NA
UHGV-1452007_33	eggNOG-mapper	1347392.CCEZ01000062_gene683	transcriptional regulator	NA
UHGV-1452007_33	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-1452007_33	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1452007_33	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1452007_33	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-1452007_34	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-1452007_34	UniRef90	UniRef90_UPI00073E7EFA	helix-turn-helix domain-containing protein	NA
UHGV-1452007_34	eggNOG-mapper	875454.BAEW01000002_gene507	domain protein	NA
UHGV-1452007_34	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1452007_34	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-1452007_36	PHROG	phrog_7882	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-1452007_36	UniRef90	UniRef90_UPI00073EF250	replication initiator protein A	NA
UHGV-1452007_36	eggNOG-mapper	573061.Clocel_2452	DnaD domain protein	NA
UHGV-1452007_36	Pfam	PF06970	Replication initiator protein A (RepA) N-terminus	RepA_N
UHGV-1452007_36	COG	COG3935	DNA replication protein DnaD	NA
UHGV-1452007_36	Structural annotation	PF06970, NF040939, COG3355	NA	NA
UHGV-1452007_37	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-1452007_37	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-1452007_37	UniRef90	UniRef90_UPI00073ED0B4	replicative DNA helicase	NA
UHGV-1452007_37	eggNOG-mapper	1499684.CCNP01000025_gene3637	DnaB-like helicase N terminal domain	NA
UHGV-1452007_37	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-1452007_37	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-1452007_37	COG	COG0305	Replicative DNA helicase	NA
UHGV-1452007_37	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-1452007_38	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1452007_38	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1452007_38	UniRef90	UniRef90_UPI00073F5ED6	single-stranded DNA-binding protein	NA
UHGV-1452007_38	eggNOG-mapper	190478.Q8SBL5_9CAUD	Single-strand binding protein family	NA
UHGV-1452007_38	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1452007_38	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1452007_38	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1452007_38	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-1452007_44	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1452007_44	UniRef90	UniRef90_UPI00073E4E5C	sigma-70 family RNA polymerase sigma factor	NA
UHGV-1452007_44	eggNOG-mapper	86416.Clopa_4297	sigma factor activity	NA
UHGV-1452007_44	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-1452007_44	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-1452007_45	PHROG	phrog_3928	NA	unknown function
UHGV-1452007_45	eggNOG-mapper	1211817.CCAT010000003_gene247	NA	NA
UHGV-1452007_46	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-1452007_46	PHROG	phrog_216	integrase	integration and excision
UHGV-1452007_46	UniRef90	UniRef90_A0A2Z4WFF3	Site-specific integrase	NA
UHGV-1452007_46	eggNOG-mapper	1211817.CCAT010000008_gene935	integrase family	NA
UHGV-1452007_46	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1452007_46	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1452007_46	Structural annotation	PF00589, MF_02055, NF040815, COG4973	NA	NA
UHGV-1452007_48	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-1452007_48	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1452007_48	UniRef90	UniRef90_UPI00164ABAC9	HNH endonuclease	NA
UHGV-1452007_48	eggNOG-mapper	768710.DesyoDRAFT_1275	HNH nucleases	NA
UHGV-1452007_48	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1452007_48	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1452007	Yes	36,930 bps	27.83%	99.90%	0.9588
UHGV-0077338	No	36,934 bps	27.84%	99.90%	0.9561