vOTU-064711

Overview

vOTU representative UHGV-1412072

No. of genomes 5

Genome length 57,894 bps

Completeness 99.90% (high-quality)

Host Agathobacter faecis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-064711
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 › vSUBFAM-00040 › vGENUS-00013 › vSUBGEN-20384 › vOTU-064711
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Agathobacter › Agathobacter faecis
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1412072
BioSample	SAMEA3449199
Genome length	57,894 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	104
CDS density	86.55%
tRNA count	3
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1412072_1	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-1412072_1	UniRef90	UniRef90_A0A1I0BKG6	BRO family, N-terminal domain	NA
UHGV-1412072_1	eggNOG-mapper	1443125.Z962_p0009	BRO family, N-terminal domain	NA
UHGV-1412072_1	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-1412072_1	COG	COG3617	Prophage antirepressor	NA
UHGV-1412072_1	Structural annotation	PF02498, COG3617	NA	NA
UHGV-1412072_2	PHROG	phrog_1194	NA	unknown function
UHGV-1412072_2	Pfam	PF20458	NA	DUF6711
UHGV-1412072_2	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-1412072_3	PHROG	phrog_18190	NA	unknown function
UHGV-1412072_3	UniRef90	UniRef90_A0A173UFM3	Peptidase S74 domain-containing protein	NA
UHGV-1412072_3	eggNOG-mapper	397290.C810_05239	NA	NA
UHGV-1412072_3	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-1412072_3	Structural annotation	PF05113, NF033848, COG3500	NA	NA
UHGV-1412072_4	PHROG	phrog_17196	kinase	other
UHGV-1412072_4	eggNOG-mapper	483218.BACPEC_01141	NA	NA
UHGV-1412072_4	Structural annotation	PF19537, PF13619, COG3536	NA	NA
UHGV-1412072_5	eggNOG-mapper	665956.HMPREF1032_02937	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-1412072_5	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-1412072_7	eggNOG-mapper	610130.Closa_0760	NA	NA
UHGV-1412072_8	NCBIFam	NF040910.1	CD1375 family protein	NA
UHGV-1412072_8	Structural annotation	NF040910	NA	NA
UHGV-1412072_9	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1412072_9	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-1412072_9	UniRef90	UniRef90_UPI001D029144	transcriptional regulator	NA
UHGV-1412072_9	eggNOG-mapper	457412.RSAG_00795	sequence-specific DNA binding	NA
UHGV-1412072_9	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1412072_9	Structural annotation	PF01381, NF007257, COG3655	NA	NA
UHGV-1412072_10	UniRef90	UniRef90_UPI001D0090A6	NA	NA
UHGV-1412072_10	eggNOG-mapper	411470.RUMGNA_03231	NA	NA
UHGV-1412072_10	Pfam	PF05339	NA	DUF739
UHGV-1412072_10	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-1412072_10	Structural annotation	PF05339, NF002773, COG1476	NA	NA
UHGV-1412072_13	PHROG	phrog_4608	anti-repressor	transcription regulation
UHGV-1412072_13	UniRef90	UniRef90_UPI001D00AF42	ORF6N domain-containing protein	NA
UHGV-1412072_13	eggNOG-mapper	926561.KB900622_gene670	ORF6N domain	NA
UHGV-1412072_13	Pfam	PF10543	ORF6N domain	ORF6N
UHGV-1412072_13	COG	COG3561	Phage anti-repressor protein Ant	NA
UHGV-1412072_13	Structural annotation	PF10543, TIGR02681, COG3646	NA	NA
UHGV-1412072_14	PHROG	phrog_32192	NA	unknown function
UHGV-1412072_14	UniRef90	UniRef90_UPI001D0221FF	alanine-zipper protein	NA
UHGV-1412072_14	Pfam	PF11839	Alanine-zipper, major outer membrane lipoprotein	Alanine_zipper
UHGV-1412072_19	PHROG	phrog_26861	NA	unknown function
UHGV-1412072_19	UniRef90	UniRef90_A0A173RCS5	Single-stranded DNA-binding protein	NA
UHGV-1412072_19	eggNOG-mapper	483218.BACPEC_01931	Single-strand binding protein family	NA
UHGV-1412072_19	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1412072_19	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1412072_19	Structural annotation	PF00436, PF13567, MF_00984, NF004476, COG0629	NA	NA
UHGV-1412072_20	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-1412072_20	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1412072_20	UniRef90	UniRef90_UPI001D02FD96	AAA family ATPase	NA
UHGV-1412072_20	eggNOG-mapper	1294142.CINTURNW_1008	nuclear chromosome segregation	NA
UHGV-1412072_20	Pfam	PF13175	AAA ATPase domain	AAA_15
UHGV-1412072_20	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-1412072_20	Structural annotation	PF02463, MF_00449, NF041034, COG0419	NA	NA
UHGV-1412072_23	eggNOG-mapper	1232453.BAIF02000057_gene1135	NA	NA
UHGV-1412072_26	PHROG	phrog_2185	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1412072_26	UniRef90	UniRef90_UPI00157154DF	recombinase RecT	NA
UHGV-1412072_26	eggNOG-mapper	1232453.BAIF02000057_gene1136	NA	NA
UHGV-1412072_26	Structural annotation	NF007351, COG3723	NA	NA
UHGV-1412072_27	PHROG	phrog_25456	NA	unknown function
UHGV-1412072_28	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-1412072_28	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-1412072_28	UniRef90	UniRef90_A0A173REW9	Beta-lactamase superfamily domain	NA
UHGV-1412072_28	eggNOG-mapper	1144313.PMI10_00501	Metallo-beta-lactamase superfamily	NA
UHGV-1412072_28	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-1412072_28	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-1412072_28	Structural annotation	PF02112, MF_01818, NF041851, COG1234	NA	NA
UHGV-1412072_29	Structural annotation	PF09629, NF002745	NA	NA
UHGV-1412072_31	PHROG	phrog_19106	NA	unknown function
UHGV-1412072_31	UniRef90	UniRef90_A0A173RDE6	Group I intron endonuclease	NA
UHGV-1412072_31	eggNOG-mapper	658655.HMPREF0988_00875	NA	NA
UHGV-1412072_31	Structural annotation	TIGR01453	NA	NA
UHGV-1412072_32	PHROG	phrog_11769	NA	unknown function
UHGV-1412072_32	UniRef90	UniRef90_A0A173RDT0	Phage replisome organizer, putative, N-terminal region	NA
UHGV-1412072_32	eggNOG-mapper	536232.CLM_1634	N-terminal phage replisome organiser (Phage_rep_org_N)	NA
UHGV-1412072_32	Pfam	PF09681	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
UHGV-1412072_32	NCBIFam	TIGR01714.1	phage replisome organizer, putative, N-terminal region	NA
UHGV-1412072_32	Structural annotation	PF09681, TIGR01714, COG3388	NA	NA
UHGV-1412072_33	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-1412072_33	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-1412072_33	UniRef90	UniRef90_A0A173RD23	DNA helicase	NA
UHGV-1412072_33	eggNOG-mapper	1298920.KI911353_gene2061	Participates in initiation and elongation during chromosome replication	NA
UHGV-1412072_33	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-1412072_33	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-1412072_33	COG	COG0305	Replicative DNA helicase	NA
UHGV-1412072_33	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-1412072_36	PHROG	phrog_21026	NA	unknown function
UHGV-1412072_37	eggNOG-mapper	397288.C806_00098	NA	NA
UHGV-1412072_38	eggNOG-mapper	742740.HMPREF9474_03128	NA	NA
UHGV-1412072_39	PHROG	phrog_8684	NA	unknown function
UHGV-1412072_39	UniRef90	UniRef90_UPI001D033076	YopX family protein	NA
UHGV-1412072_39	eggNOG-mapper	1121097.JCM15093_2710	YopX protein	NA
UHGV-1412072_39	Pfam	PF09643	YopX protein	YopX
UHGV-1412072_39	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-1412072_39	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-1412072_40	eggNOG-mapper	1235800.C819_02246	NA	NA
UHGV-1412072_42	PHROG	phrog_20593	NA	unknown function
UHGV-1412072_43	PHROG	phrog_874	NA	unknown function
UHGV-1412072_43	UniRef90	UniRef90_A0A6N7W7Q7	ASCH domain-containing protein	NA
UHGV-1412072_43	eggNOG-mapper	411468.CLOSCI_00298	NA	NA
UHGV-1412072_43	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-1412072_45	eggNOG-mapper	478749.BRYFOR_07594	NA	NA
UHGV-1412072_47	Structural annotation	PF17388	NA	NA
UHGV-1412072_48	PHROG	phrog_757	DNA methyltransferase	other
UHGV-1412072_48	eggNOG-mapper	658655.HMPREF0988_00884	NA	NA
UHGV-1412072_48	AcrCatalog	cluster_47493	NA	NA
UHGV-1412072_48	Structural annotation	PF00145, MF_00341, COG0270	NA	NA
UHGV-1412072_49	UniRef90	UniRef90_A0A173RE24	Bacterial regulatory proteins, luxR family	NA
UHGV-1412072_49	Pfam	PF00196	Bacterial regulatory proteins, luxR family	GerE
UHGV-1412072_49	Structural annotation	PF00196, MF_00245, NF001067, COG2771	NA	NA
UHGV-1412072_50	KOfam	K14059	int; integrase	NA
UHGV-1412072_50	PHROG	phrog_1	integrase	integration and excision
UHGV-1412072_50	UniRef90	UniRef90_UPI001D00AE51	site-specific integrase	NA
UHGV-1412072_50	eggNOG-mapper	97139.C824_00125	Phage integrase family	NA
UHGV-1412072_50	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1412072_50	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1412072_50	Structural annotation	PF00589, PF02920, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-1412072_52	eggNOG-mapper	658655.HMPREF0988_00919	NA	NA
UHGV-1412072_53	eggNOG-mapper	658655.HMPREF0988_00918	NA	NA
UHGV-1412072_54	PHROG	phrog_16490	NA	unknown function
UHGV-1412072_54	eggNOG-mapper	397290.C810_01328	NA	NA
UHGV-1412072_55	PHROG	phrog_20016	NA	unknown function
UHGV-1412072_55	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-1412072_55	eggNOG-mapper	397290.C810_05214	NA	NA
UHGV-1412072_55	Structural annotation	PF18573, NF033147	NA	NA
UHGV-1412072_56	eggNOG-mapper	658655.HMPREF0988_00915	NA	NA
UHGV-1412072_57	eggNOG-mapper	397290.C810_01336	NA	NA
UHGV-1412072_57	Structural annotation	PF13058	NA	NA
UHGV-1412072_62	Structural annotation	PF08207, MF_00085, TIGR00037, COG0231	NA	NA
UHGV-1412072_66	UniRef90	UniRef90_UPI001D008199	helix-turn-helix domain-containing protein	NA
UHGV-1412072_66	eggNOG-mapper	877411.JMMA01000002_gene1483	Cro/C1-type HTH DNA-binding domain	NA
UHGV-1412072_66	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-1412072_69	eggNOG-mapper	658655.HMPREF0988_00895	NA	NA
UHGV-1412072_70	PHROG	phrog_229	MazG-like pyrophosphatase	other
UHGV-1412072_70	UniRef90	UniRef90_UPI001D02B1F9	nucleoside triphosphate pyrophosphohydrolase family protein	NA
UHGV-1412072_70	eggNOG-mapper	428125.CLOLEP_01391	MazG nucleotide pyrophosphohydrolase domain	NA
UHGV-1412072_70	Pfam	PF03819	MazG nucleotide pyrophosphohydrolase domain	MazG
UHGV-1412072_70	COG	COG1694	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	NA
UHGV-1412072_70	Structural annotation	PF03819, MF_01020, TIGR03188, COG1694	NA	NA
UHGV-1412072_71	eggNOG-mapper	411473.RUMCAL_02525	NA	NA
UHGV-1412072_73	UniRef90	UniRef90_UPI001D011ACB	zinc ribbon domain-containing protein	NA
UHGV-1412072_73	Pfam	PF13248	zinc-ribbon domain	zf-ribbon_3
UHGV-1412072_77	Structural annotation	PF04466	NA	NA
UHGV-1412072_84	UniRef90	UniRef90_R5CGZ9	DNA-directed RNA polymerase subunit alpha 2	NA
UHGV-1412072_84	eggNOG-mapper	1235802.C823_01840	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	NA
UHGV-1412072_84	Pfam	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain	RNA_pol_A_CTD
UHGV-1412072_84	COG	COG0202	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	NA
UHGV-1412072_84	Structural annotation	PF03118, NF005841	NA	NA
UHGV-1412072_85	PHROG	phrog_478	site-specific recombination directionality factor RDF	integration and excision
UHGV-1412072_85	UniRef90	UniRef90_A0A285PT53	Prokaryotic membrane lipoprotein lipid attachment site profile	NA
UHGV-1412072_85	eggNOG-mapper	1235792.C808_00058	NA	NA
UHGV-1412072_86	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-1412072_86	UniRef90	UniRef90_UPI001D009E65	phage terminase large subunit	NA
UHGV-1412072_86	eggNOG-mapper	1121866.AUGK01000003_gene1428	chromosome segregation	NA
UHGV-1412072_86	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-1412072_86	COG	COG5410	NA	NA
UHGV-1412072_86	Structural annotation	PF17289, PF05876, MF_04147, NF033889, COG5362, COG5410	NA	NA
UHGV-1412072_87	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1412072_87	UniRef90	UniRef90_A0A410QFZ6	NA	NA
UHGV-1412072_87	eggNOG-mapper	994573.T472_0211085	sigma factor activity	NA
UHGV-1412072_87	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-1412072_87	Structural annotation	PF07374, MF_00674, NF008895, COG1191	NA	NA
UHGV-1412072_88	PHROG	phrog_64	portal protein	head and packaging
UHGV-1412072_88	UniRef90	UniRef90_A0A173UGW9	Phage portal protein, SPP1 family	NA
UHGV-1412072_88	eggNOG-mapper	1298920.KI911353_gene2663	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1412072_88	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1412072_88	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-1412072_89	UniRef90	UniRef90_R6C0B6	Phage capsid scaffolding protein	NA
UHGV-1412072_90	PHROG	phrog_909	major head protein	head and packaging
UHGV-1412072_90	eggNOG-mapper	1298920.KI911353_gene2661	NA	NA
UHGV-1412072_91	PHROG	phrog_29	major head protein	head and packaging
UHGV-1412072_91	UniRef90	UniRef90_UPI001D02C54B	major capsid protein	NA
UHGV-1412072_91	eggNOG-mapper	1298920.KI911353_gene2660	Phage major capsid protein E	NA
UHGV-1412072_91	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-1412072_91	Structural annotation	PF03864, MF_04133, NF041162, COG4653	NA	NA
UHGV-1412072_92	UniRef90	UniRef90_A0A416G2T8	Rho_N domain-containing protein	NA
UHGV-1412072_92	Structural annotation	PF21169	NA	NA
UHGV-1412072_93	eggNOG-mapper	397290.C810_01402	NA	NA
UHGV-1412072_94	PHROG	phrog_4105	NA	unknown function
UHGV-1412072_94	eggNOG-mapper	411459.RUMOBE_00911	NA	NA
UHGV-1412072_95	PHROG	phrog_443	holin	lysis
UHGV-1412072_95	UniRef90	UniRef90_UPI000BA3B743	holin	NA
UHGV-1412072_95	eggNOG-mapper	411490.ANACAC_00704	Putative lactococcus lactis phage r1t holin	NA
UHGV-1412072_95	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-1412072_95	Structural annotation	PF16945	NA	NA
UHGV-1412072_96	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1412072_97	eggNOG-mapper	1298920.KI911353_gene2654	NA	NA
UHGV-1412072_97	AcrCatalog	cluster_24841	NA	NA
UHGV-1412072_98	Structural annotation	PF05657	NA	NA
UHGV-1412072_99	UniRef90	UniRef90_A0A8D9PGN2	Major tail protein	NA
UHGV-1412072_99	Structural annotation	PF16463, TIGR02126, COG5437	NA	NA
UHGV-1412072_102	PHROG	phrog_14030	NA	unknown function
UHGV-1412072_102	UniRef90	UniRef90_A0A3R6ARM6	Peptidoglycan-binding protein	NA
UHGV-1412072_102	eggNOG-mapper	1235793.C809_02691	N-Acetylmuramoyl-L-alanine amidase	NA
UHGV-1412072_102	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-1412072_103	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1412072_103	UniRef90	UniRef90_A0A173UHS1	Phage-related protein	NA
UHGV-1412072_103	eggNOG-mapper	1211844.CBLM010000016_gene1482	tape measure	NA
UHGV-1412072_103	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-1412072_103	Structural annotation	PF20155, MF_04138	NA	NA
UHGV-1412072_104	UniRef90	UniRef90_A0A173UG14	BIG2 domain-containing protein	NA
UHGV-1412072_104	eggNOG-mapper	1410624.JNKK01000088_gene2110	Bacterial Ig-like domain (group 2)	NA
UHGV-1412072_104	Structural annotation	PF02368, PF07233, NF038353, NF005261	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1412072	Yes	57,894 bps	40.16%	99.90%	0.9813
UHGV-2117265	No	38,556 bps	39.91%	66.87%	0.9764
UHGV-0295832	No	22,827 bps	39.96%	39.48%	0.9804
UHGV-2110285	No	19,602 bps	40.41%	33.99%	0.9815
UHGV-0165005	No	19,141 bps	40.19%	33.17%	0.9820