vOTU-065046

Overview

vOTU representative UHGV-0208249

No. of genomes 2

Genome length 43,449 bps

Completeness 96.14% (high-quality)

Host Romboutsia timonensis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-065046
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00041 › vSUBFAM-01009 › vGENUS-19947 › vSUBGEN-38936 › vOTU-065046
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Peptostreptococcales › Peptostreptococcaceae › Romboutsia › Romboutsia timonensis
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0208249
BioSample	NA
Genome length	43,449 bps
CheckV completeness	96.14% (high-quality)
CheckV contamination	0.00%
CDS count	73
CDS density	88.87%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0208249_1	eggNOG-mapper	697281.Mahau_0099	PFAM Helix-turn-helix	NA
UHGV-0208249_1	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0208249_1	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0208249_3	KOfam	K03703	uvrC; excinuclease ABC subunit C	NA
UHGV-0208249_3	PHROG	phrog_35456	NA	unknown function
UHGV-0208249_3	UniRef90	UniRef90_A0A1C5YSJ7	Excinuclease ABC subunit C	NA
UHGV-0208249_3	eggNOG-mapper	444158.MmarC6_0158	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision	NA
UHGV-0208249_3	Pfam	PF01541	GIY-YIG catalytic domain	GIY-YIG
UHGV-0208249_3	COG	COG0322	Excinuclease UvrABC, nuclease subunit	NA
UHGV-0208249_3	Structural annotation	PF01541, MF_01029, COG2827	NA	NA
UHGV-0208249_4	KOfam	K03466	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	NA
UHGV-0208249_4	PHROG	phrog_1358	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UHGV-0208249_4	UniRef90	UniRef90_T4VE98	FtsK/SpoIIIE family protein	NA
UHGV-0208249_4	eggNOG-mapper	309799.DICTH_1023	ftsk spoiiie	NA
UHGV-0208249_4	Pfam	PF01580	FtsK/SpoIIIE family	FtsK_SpoIIIE
UHGV-0208249_4	COG	COG1674	DNA segregation ATPase FtsK/SpoIIIE or related protein	NA
UHGV-0208249_4	Structural annotation	PF01580, MF_04057, NF041214, COG0433	NA	NA
UHGV-0208249_9	UniRef90	UniRef90_UPI001E5269FB	sigma-70 region 4 domain-containing protein	NA
UHGV-0208249_9	eggNOG-mapper	796606.BMMGA3_03145	SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains	NA
UHGV-0208249_9	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0208249_9	NCBIFam	TIGR01764.1	excisionase family DNA-binding protein	NA
UHGV-0208249_9	Structural annotation	PF12728, PF13936, TIGR01764, COG3311	NA	NA
UHGV-0208249_11	UniRef90	UniRef90_UPI001D0C545F	conserved phage C-terminal domain-containing protein	NA
UHGV-0208249_11	eggNOG-mapper	1151292.QEW_0390	Conserved phage C-terminus (Phg_2220_C)	NA
UHGV-0208249_12	UniRef90	UniRef90_T4VF93	MarR family protein	NA
UHGV-0208249_12	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0208249_12	COG	COG1846	DNA-binding transcriptional regulator, MarR family	NA
UHGV-0208249_17	Structural annotation	PF04014, NF007312, COG2336	NA	NA
UHGV-0208249_22	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0208249_22	PHROG	phrog_435	endolysin	lysis
UHGV-0208249_22	UniRef90	UniRef90_UPI0008DA62D1	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0208249_22	eggNOG-mapper	1151292.QEW_2091	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0208249_22	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0208249_22	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0208249_22	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-0208249_23	PHROG	phrog_9829	NA	unknown function
UHGV-0208249_25	KOfam	K24213	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	NA
UHGV-0208249_25	PHROG	phrog_6782	tail fiber protein	tail
UHGV-0208249_25	eggNOG-mapper	536233.CLO_0899	NA	NA
UHGV-0208249_25	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0208249_25	Structural annotation	PF10651	NA	NA
UHGV-0208249_26	PHROG	phrog_8908	NA	unknown function
UHGV-0208249_26	Structural annotation	NF040910	NA	NA
UHGV-0208249_27	PHROG	phrog_3321	rhodanese-related sulfurtransferase	other
UHGV-0208249_27	eggNOG-mapper	1296662.S5MCG6_9CAUD	transferase activity	NA
UHGV-0208249_28	UniRef90	UniRef90_UPI0008D95F90	discoidin domain-containing protein	NA
UHGV-0208249_29	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0208249_30	KOfam	K20846	cgkA; kappa-carrageenase [EC:3.2.1.83]	NA
UHGV-0208249_30	PHROG	phrog_521	tail protein	tail
UHGV-0208249_30	eggNOG-mapper	500633.CLOHIR_00382	NA	NA
UHGV-0208249_30	Pfam	PF10076	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
UHGV-0208249_30	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-0208249_30	COG	COG3778	NA	NA
UHGV-0208249_31	PHROG	phrog_6	baseplate protein	tail
UHGV-0208249_31	UniRef90	UniRef90_UPI00189A0B0D	baseplate J/gp47 family protein	NA
UHGV-0208249_31	eggNOG-mapper	272563.CD630_13710	Baseplate J-like protein	NA
UHGV-0208249_31	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-0208249_31	COG	COG3299	NA	NA
UHGV-0208249_31	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-0208249_32	PHROG	phrog_120	baseplate protein	tail
UHGV-0208249_32	UniRef90	UniRef90_UPI0009413ACD	NA	NA
UHGV-0208249_32	eggNOG-mapper	1151292.QEW_0431	NA	NA
UHGV-0208249_32	Pfam	PF10934	NA	DUF2634
UHGV-0208249_32	Structural annotation	PF10934, MF_02010, TIGR03357, COG3628	NA	NA
UHGV-0208249_33	PHROG	phrog_579	NA	unknown function
UHGV-0208249_33	UniRef90	UniRef90_UPI001D124974	NA	NA
UHGV-0208249_33	Pfam	PF10844	NA	DUF2577
UHGV-0208249_33	Structural annotation	PF10844, MF_00075, NF003085	NA	NA
UHGV-0208249_34	KOfam	K21471	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	NA
UHGV-0208249_34	PHROG	phrog_400	tail protein	tail
UHGV-0208249_34	UniRef90	UniRef90_T4V7P4	NlpC/P60 family protein	NA
UHGV-0208249_34	eggNOG-mapper	1151292.QEW_1752	NLP P60 protein	NA
UHGV-0208249_34	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-0208249_34	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0208249_34	Structural annotation	PF14594, PF00877, MF_02071, NF033848, COG4379, COG0791, COG3584	NA	NA
UHGV-0208249_35	PHROG	phrog_380	endolysin	lysis
UHGV-0208249_35	UniRef90	UniRef90_UPI001896CF09	LysM peptidoglycan-binding domain-containing protein	NA
UHGV-0208249_35	eggNOG-mapper	1151292.QEW_0427	LysM domain	NA
UHGV-0208249_35	Pfam	PF01476	LysM domain	LysM
UHGV-0208249_35	COG	COG1652	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	NA
UHGV-0208249_35	Structural annotation	PF21821, MF_02014, TIGR02126, NF010723, COG3499	NA	NA
UHGV-0208249_36	PHROG	phrog_13339	tail length tape measure protein	tail
UHGV-0208249_36	UniRef90	UniRef90_T4VE82	Phage tail tape measure protein, TP901 family, core region	NA
UHGV-0208249_36	eggNOG-mapper	1476973.JMMB01000007_gene1771	Phage-related minor tail protein	NA
UHGV-0208249_36	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0208249_36	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0208249_36	COG	COG5283	Phage-related tail protein	NA
UHGV-0208249_36	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0208249_37	PHROG	phrog_389	tail protein XkdN-like	tail
UHGV-0208249_37	UniRef90	UniRef90_T4VEA3	Phage XkdN-like family protein	NA
UHGV-0208249_37	eggNOG-mapper	646529.Desaci_1309	PFAM Phage XkdN-like protein	NA
UHGV-0208249_37	Pfam	PF08890	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
UHGV-0208249_37	Structural annotation	PF08890	NA	NA
UHGV-0208249_38	PHROG	phrog_365	tail protein	tail
UHGV-0208249_38	UniRef90	UniRef90_UPI001AE5BCA4	phage tail tube protein	NA
UHGV-0208249_38	eggNOG-mapper	1151292.QEW_1747	Phage tail tube protein	NA
UHGV-0208249_38	Pfam	PF09393	Phage tail tube protein	DUF2001
UHGV-0208249_38	Structural annotation	PF09393, TIGR02241, COG3498	NA	NA
UHGV-0208249_39	PHROG	phrog_1480	tail sheath	tail
UHGV-0208249_39	UniRef90	UniRef90_UPI001AE613B3	phage tail sheath subtilisin-like domain-containing protein	NA
UHGV-0208249_39	eggNOG-mapper	1151292.QEW_1746	Phage tail sheath C-terminal domain	NA
UHGV-0208249_39	Pfam	PF04984	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
UHGV-0208249_39	Pfam	PF17482	Phage tail sheath C-terminal domain	Phage_sheath_1C
UHGV-0208249_39	Structural annotation	PF10758, COG3497	NA	NA
UHGV-0208249_40	PHROG	phrog_525	NA	unknown function
UHGV-0208249_40	UniRef90	UniRef90_A0A1X9JZ99	RtbA	NA
UHGV-0208249_40	eggNOG-mapper	931276.Cspa_c26960	NA	NA
UHGV-0208249_40	Pfam	PF20765	NA	DUF6838
UHGV-0208249_40	Structural annotation	PF20765, TIGR01633, COG5003	NA	NA
UHGV-0208249_41	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0208249_41	UniRef90	UniRef90_UPI00189ACB38	HK97 gp10 family phage protein	NA
UHGV-0208249_41	eggNOG-mapper	697284.ERIC2_c23670	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0208249_41	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0208249_41	Structural annotation	PF17395, TIGR01725, COG5005	NA	NA
UHGV-0208249_42	PHROG	phrog_615	head-tail adaptor	connector
UHGV-0208249_42	UniRef90	UniRef90_T4VMQ2	Ribosomal L23 family protein	NA
UHGV-0208249_42	eggNOG-mapper	1151292.QEW_0419	NA	NA
UHGV-0208249_42	Structural annotation	PF12206, TIGR01563, COG5614	NA	NA
UHGV-0208249_43	PHROG	phrog_132	head-tail adaptor	connector
UHGV-0208249_43	UniRef90	UniRef90_T4V7T3	Phage gp6-like head-tail connector family protein	NA
UHGV-0208249_43	eggNOG-mapper	332101.JIBU02000023_gene4812	NA	NA
UHGV-0208249_43	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0208249_43	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0208249_44	PHROG	phrog_267	major head protein	head and packaging
UHGV-0208249_44	UniRef90	UniRef90_I7ILV4	Phage coat protein gp6	NA
UHGV-0208249_44	eggNOG-mapper	1118063.I7J4F9_9CAUD	viral capsid	NA
UHGV-0208249_44	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0208249_45	PHROG	phrog_172	head scaffolding protein	head and packaging
UHGV-0208249_45	UniRef90	UniRef90_UPI001F2753A6	NA	NA
UHGV-0208249_45	eggNOG-mapper	1443125.Z962_07915	NA	NA
UHGV-0208249_45	Pfam	PF14265	NA	DUF4355
UHGV-0208249_45	Structural annotation	PF14265	NA	NA
UHGV-0208249_46	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0208249_46	UniRef90	UniRef90_UPI000571E0D5	minor capsid protein	NA
UHGV-0208249_46	eggNOG-mapper	1283341.Q24LJ3_BPPCD	Phage Mu protein F like protein	NA
UHGV-0208249_46	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0208249_46	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0208249_46	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0208249_47	PHROG	phrog_64	portal protein	head and packaging
UHGV-0208249_47	UniRef90	UniRef90_UPI001431B561	phage portal protein	NA
UHGV-0208249_47	eggNOG-mapper	796940.HMPREF9628_01309	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0208249_47	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0208249_47	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-0208249_47	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0208249_48	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0208249_48	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0208249_48	UniRef90	UniRef90_A0A0L0W6K5	Phage terminase, large subunit, PBSX family	NA
UHGV-0208249_48	eggNOG-mapper	1307436.PBF_04330	Terminase-like family	NA
UHGV-0208249_48	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0208249_48	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0208249_48	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0208249_48	COG	COG1783	Phage terminase large subunit	NA
UHGV-0208249_48	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0208249_49	PHROG	phrog_1595	terminase small subunit	head and packaging
UHGV-0208249_49	UniRef90	UniRef90_A0A2P8H650	Terminase small subunit	NA
UHGV-0208249_49	eggNOG-mapper	764299.STRIC_2523	DNA packaging	NA
UHGV-0208249_49	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0208249_49	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0208249_50	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0208249_50	UniRef90	UniRef90_T4V7R5	Sigma-70, region 4 family protein	NA
UHGV-0208249_50	eggNOG-mapper	1540257.JQMW01000013_gene751	sigma factor activity	NA
UHGV-0208249_50	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0208249_50	Structural annotation	PF04545, MF_00245, TIGR01636, COG2739	NA	NA
UHGV-0208249_52	PHROG	phrog_98	NA	unknown function
UHGV-0208249_52	UniRef90	UniRef90_UPI000E34A494	YopX family protein	NA
UHGV-0208249_52	eggNOG-mapper	1220589.CD32_01175	YopX protein	NA
UHGV-0208249_52	Pfam	PF09643	YopX protein	YopX
UHGV-0208249_52	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0208249_52	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0208249_54	PHROG	phrog_3458	NA	unknown function
UHGV-0208249_54	eggNOG-mapper	749413.E5DV87_9VIRU	NA	NA
UHGV-0208249_56	PHROG	phrog_5164	NA	unknown function
UHGV-0208249_56	UniRef90	UniRef90_A0A1L3ND08	Phosphoribosyl-ATP pyrophosphohydrolase family protein	NA
UHGV-0208249_56	eggNOG-mapper	536232.CLM_1638	NA	NA
UHGV-0208249_56	Pfam	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase	PRA-PH
UHGV-0208249_59	PHROG	phrog_6721	NA	unknown function
UHGV-0208249_59	eggNOG-mapper	1151292.QEW_0706	NA	NA
UHGV-0208249_61	PHROG	phrog_3377	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0208249_61	UniRef90	UniRef90_Q4ZBR0	ORF019	NA
UHGV-0208249_61	eggNOG-mapper	320843.Q4ZBR0_9CAUD	sequence-specific DNA binding transcription factor activity	NA
UHGV-0208249_62	PHROG	phrog_236	nucleotide kinase	other
UHGV-0208249_62	UniRef90	UniRef90_A0A6J5L4Z8	SaV-like	NA
UHGV-0208249_62	eggNOG-mapper	673376.F2VHW0_9CAUD	NA	NA
UHGV-0208249_62	Pfam	PF11753	NA	DUF3310
UHGV-0208249_64	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0208249_64	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0208249_64	UniRef90	UniRef90_T4VF98	Single-stranded DNA-binding protein	NA
UHGV-0208249_64	eggNOG-mapper	272563.CD630_29410	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0208249_64	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0208249_64	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0208249_64	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0208249_64	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0208249_64	Structural annotation	PF00436, MF_00984, NF005406, COG0629	NA	NA
UHGV-0208249_66	Pfam	PF09388	Spo0E like sporulation regulatory protein	SpoOE-like
UHGV-0208249_72	KOfam	K17680	PEO1; twinkle protein [EC:5.6.2.3]	NA
UHGV-0208249_72	PHROG	phrog_239	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UHGV-0208249_72	UniRef90	UniRef90_A0A1S9I2A8	SF4 helicase domain-containing protein	NA
UHGV-0208249_72	eggNOG-mapper	1131462.DCF50_p1819	NA	NA
UHGV-0208249_72	PADLOC	drt-UG29	DRT	DRT
UHGV-0208249_72	Pfam	PF01807	CHC2 zinc finger	zf-CHC2
UHGV-0208249_72	Pfam	PF13155	Toprim-like	Toprim_2
UHGV-0208249_72	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0208249_72	COG	COG0305	Replicative DNA helicase	NA
UHGV-0208249_72	Structural annotation	PF03796, PF19898, MF_04154, TIGR03877, TIGR01391, COG0467, COG0358	NA	NA
UHGV-0208249_73	PHROG	phrog_678	replication initiation O-like	DNA, RNA and nucleotide metabolism
UHGV-0208249_73	eggNOG-mapper	536233.CLO_1408	Helix-turn-helix domain	NA
UHGV-0208249_73	COG	COG0640	DNA-binding transcriptional regulator, ArsR family	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0208249	Yes	43,449 bps	28.08%	96.14%	0.9719
UHGV-0178201	No	37,477 bps	28.26%	82.88%	0.9739