vOTU-065100

Overview

vOTU representative UHGV-0195350

No. of genomes 2

Genome length 42,520 bps

Completeness 99.90% (high-quality)

Host Clostridia

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-065100
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00124 › vSUBFAM-00555 › vGENUS-02394 › vSUBGEN-34224 › vOTU-065100
Host taxonomy	Bacteria › Firmicutes A › Clostridia
Host range breadth	Class
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0195350
BioSample	NA
Genome length	42,520 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	73
CDS density	92.42%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0195350_1	PHROG	phrog_27197	NA	unknown function
UHGV-0195350_1	eggNOG-mapper	886882.PPSC2_p0363	regulation of DNA-templated transcription, elongation	NA
UHGV-0195350_1	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0195350_1	Structural annotation	NF007410	NA	NA
UHGV-0195350_2	PHROG	phrog_22292	NA	unknown function
UHGV-0195350_3	PHROG	phrog_21026	NA	unknown function
UHGV-0195350_9	PHROG	phrog_1485	NA	unknown function
UHGV-0195350_9	UniRef90	UniRef90_A0A7W3SWM2	NA	NA
UHGV-0195350_9	eggNOG-mapper	1415774.U728_1099	NA	NA
UHGV-0195350_9	Pfam	PF07659	Nucleotide modification associated domain 1	DUF1599
UHGV-0195350_9	Structural annotation	PF07659	NA	NA
UHGV-0195350_12	Structural annotation	PF18066	NA	NA
UHGV-0195350_13	Structural annotation	PF05263, TIGR01636	NA	NA
UHGV-0195350_17	Structural annotation	PF17917	NA	NA
UHGV-0195350_19	PHROG	phrog_15863	NA	unknown function
UHGV-0195350_19	UniRef90	UniRef90_A0A644WI33	J domain-containing protein	NA
UHGV-0195350_19	eggNOG-mapper	693746.OBV_01780	DnaJ molecular chaperone homology domain	NA
UHGV-0195350_19	COG	COG2214	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	NA
UHGV-0195350_20	UniRef90	UniRef90_A0A316R7E8	RHH_1 domain-containing protein	NA
UHGV-0195350_20	Pfam	PF01402	Ribbon-helix-helix protein, copG family	RHH_1
UHGV-0195350_20	Structural annotation	PF10723, NF040976, COG4710	NA	NA
UHGV-0195350_21	PHROG	phrog_3377	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0195350_21	UniRef90	UniRef90_G9B1F6	Gp55	NA
UHGV-0195350_21	eggNOG-mapper	764595.G9B1F6_9CAUD	sequence-specific DNA binding transcription factor activity	NA
UHGV-0195350_23	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-0195350_23	UniRef90	UniRef90_A0A845QMQ7	Terminase	NA
UHGV-0195350_23	eggNOG-mapper	755731.Clo1100_2438	TIGRFAM Phage	NA
UHGV-0195350_23	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0195350_23	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0195350_23	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-0195350_23	COG	COG5362	Phage terminase large subunit	NA
UHGV-0195350_23	Structural annotation	PF17289, PF05876, MF_04147, NF033889, COG5362, COG5410	NA	NA
UHGV-0195350_25	PHROG	phrog_156	portal protein	head and packaging
UHGV-0195350_25	eggNOG-mapper	1232449.BAHV02000016_gene1822	NA	NA
UHGV-0195350_25	Structural annotation	PF16510, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0195350_27	PHROG	phrog_267	major head protein	head and packaging
UHGV-0195350_27	UniRef90	UniRef90_A0A3D1XAT6	P22 coat protein-protein 5 domain protein	NA
UHGV-0195350_27	eggNOG-mapper	665956.HMPREF1032_03906	P22 coat protein-protein 5 domain protein	NA
UHGV-0195350_27	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0195350_28	Structural annotation	PF07100, COG4288	NA	NA
UHGV-0195350_30	PHROG	phrog_3287	virion structural protein	head and packaging
UHGV-0195350_30	eggNOG-mapper	1232449.BAHV02000016_gene1816	NA	NA
UHGV-0195350_30	Structural annotation	PF11134, MF_01282, TIGR03300, COG5276	NA	NA
UHGV-0195350_31	eggNOG-mapper	1232449.BAHV02000016_gene1815	NA	NA
UHGV-0195350_32	PHROG	phrog_5207	NA	unknown function
UHGV-0195350_32	UniRef90	UniRef90_A0A1C6GKY2	Mtd_N domain-containing protein	NA
UHGV-0195350_32	eggNOG-mapper	696281.Desru_3489	exo-alpha-(2->6)-sialidase activity	NA
UHGV-0195350_32	Pfam	PF18454	Major tropism determinant N-terminal domain	Mtd_N
UHGV-0195350_32	COG	COG4409	Neuraminidase (sialidase) NanH, contains C-terminal autotransporter domain	NA
UHGV-0195350_32	Structural annotation	PF18454	NA	NA
UHGV-0195350_33	eggNOG-mapper	632245.CLP_1663	nuclear chromosome segregation	NA
UHGV-0195350_33	Pfam	PF18454	Major tropism determinant N-terminal domain	Mtd_N
UHGV-0195350_33	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0195350_35	Structural annotation	NF040910	NA	NA
UHGV-0195350_36	PHROG	phrog_27545	NA	unknown function
UHGV-0195350_36	UniRef90	UniRef90_R6EL00	Glycosyl hydrolase family 18 family protein	NA
UHGV-0195350_36	eggNOG-mapper	1519439.JPJG01000060_gene1895	NA	NA
UHGV-0195350_37	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0195350_37	Structural annotation	TIGR02559	NA	NA
UHGV-0195350_38	PHROG	phrog_9854	NA	unknown function
UHGV-0195350_38	UniRef90	UniRef90_A0A2M9MW69	LPD38 domain-containing protein	NA
UHGV-0195350_38	eggNOG-mapper	1121091.AUMP01000003_gene2597	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis	NA
UHGV-0195350_38	Pfam	PF18857	Large polyvalent protein associated domain 38	LPD38
UHGV-0195350_38	COG	COG0503	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	NA
UHGV-0195350_38	Structural annotation	PF18857, PF18798	NA	NA
UHGV-0195350_39	KOfam	K08640	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	NA
UHGV-0195350_39	PHROG	phrog_894	endolysin	lysis
UHGV-0195350_39	UniRef90	UniRef90_A0A1D8GIJ0	Peptidase_M15_3 domain-containing protein	NA
UHGV-0195350_39	eggNOG-mapper	1121289.JHVL01000011_gene1405	Peptidase M15A	NA
UHGV-0195350_39	Pfam	PF08291	Peptidase M15	Peptidase_M15_3
UHGV-0195350_39	COG	COG3108	NA	NA
UHGV-0195350_39	Structural annotation	PF08291, COG3108	NA	NA
UHGV-0195350_40	PHROG	phrog_4105	NA	unknown function
UHGV-0195350_40	UniRef90	UniRef90_A0A139MZU5	NA	NA
UHGV-0195350_40	eggNOG-mapper	1005705.HMPREF9967_1056	NA	NA
UHGV-0195350_41	PHROG	phrog_443	holin	lysis
UHGV-0195350_41	UniRef90	UniRef90_UPI0002E2AC7F	holin	NA
UHGV-0195350_41	eggNOG-mapper	610130.Closa_4157	Putative lactococcus lactis phage r1t holin	NA
UHGV-0195350_41	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-0195350_41	Structural annotation	PF16945	NA	NA
UHGV-0195350_42	PHROG	phrog_21718	NA	unknown function
UHGV-0195350_42	eggNOG-mapper	476272.RUMHYD_01768	NA	NA
UHGV-0195350_44	PHROG	phrog_16490	NA	unknown function
UHGV-0195350_44	eggNOG-mapper	641112.ACOK01000103_gene525	NA	NA
UHGV-0195350_45	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0195350_47	KOfam	K14059	int; integrase	NA
UHGV-0195350_47	PHROG	phrog_1	integrase	integration and excision
UHGV-0195350_47	UniRef90	UniRef90_A0A845QLR8	Tyr recombinase domain-containing protein	NA
UHGV-0195350_47	eggNOG-mapper	936375.HMPREF1152_1040	Phage integrase family	NA
UHGV-0195350_47	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0195350_47	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0195350_47	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0195350_47	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0195350_48	UniRef90	UniRef90_A0A523STR4	Phospholipase D family protein	NA
UHGV-0195350_48	eggNOG-mapper	1235794.C811_00184	Fibronectin type III domain	NA
UHGV-0195350_48	COG	COG2333	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	NA
UHGV-0195350_49	PHROG	phrog_20886	NA	unknown function
UHGV-0195350_49	UniRef90	UniRef90_UPI00164BB8FD	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-0195350_49	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0195350_49	Structural annotation	PF06114	NA	NA
UHGV-0195350_50	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0195350_50	UniRef90	UniRef90_R7N2W9	DNA-binding helix-turn-helix protein	NA
UHGV-0195350_50	eggNOG-mapper	411462.DORLON_00819	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0195350_50	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0195350_50	Structural annotation	PF12844, MF_00535, NF041951, COG3655	NA	NA
UHGV-0195350_53	KOfam	K19449	sinR; XRE family transcriptional regulator, master regulator for biofilm formation	NA
UHGV-0195350_53	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0195350_53	UniRef90	UniRef90_A0A8G0M6K7	Helix-turn-helix domain-containing protein	NA
UHGV-0195350_53	eggNOG-mapper	12417.Q9T1J3_9CAUD	sequence-specific DNA binding	NA
UHGV-0195350_53	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0195350_53	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0195350_54	Structural annotation	NF040990	NA	NA
UHGV-0195350_56	eggNOG-mapper	1122927.KB895419_gene2381	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	NA
UHGV-0195350_56	Pfam	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
UHGV-0195350_56	COG	COG3103	NA	NA
UHGV-0195350_56	Structural annotation	PF01832, NF038016, COG1705	NA	NA
UHGV-0195350_60	PHROG	phrog_7838	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0195350_60	eggNOG-mapper	742767.HMPREF9456_02397	NA	NA
UHGV-0195350_60	Structural annotation	PF04098, TIGR00607, COG5055	NA	NA
UHGV-0195350_61	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0195350_61	UniRef90	UniRef90_UPI001CF8591D	YqaJ viral recombinase family protein	NA
UHGV-0195350_61	eggNOG-mapper	1430331.EP10_02380	YqaJ viral recombinase family	NA
UHGV-0195350_61	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0195350_61	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0195350_61	Structural annotation	PF10926, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0195350_62	PHROG	phrog_7370	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0195350_62	UniRef90	UniRef90_UPI001D07AE80	HNH endonuclease	NA
UHGV-0195350_62	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0195350_62	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0195350_63	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0195350_63	UniRef90	UniRef90_UPI000C7BF263	recombination protein NinB	NA
UHGV-0195350_63	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-0195350_65	PHROG	phrog_2514	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0195350_65	UniRef90	UniRef90_A0A1U7MLB1	Phg_2220_C domain-containing protein	NA
UHGV-0195350_65	eggNOG-mapper	642492.Clole_0946	DnaD domain protein	NA
UHGV-0195350_65	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0195350_66	PHROG	phrog_9804	NA	unknown function
UHGV-0195350_66	UniRef90	UniRef90_A0A174S716	Inhibitor_G39P domain-containing protein	NA
UHGV-0195350_66	eggNOG-mapper	585394.RHOM_14005	Loader and inhibitor of phage G40P	NA
UHGV-0195350_66	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-0195350_66	Structural annotation	PF11417	NA	NA
UHGV-0195350_67	PHROG	phrog_2245	nucleoside triphosphate pyrophosphohydrolase	other
UHGV-0195350_67	UniRef90	UniRef90_A0A417IIQ4	MazG domain-containing protein	NA
UHGV-0195350_67	eggNOG-mapper	1415774.U728_1686	NA	NA
UHGV-0195350_68	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0195350_68	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0195350_68	UniRef90	UniRef90_UPI001CF91680	single-stranded DNA-binding protein	NA
UHGV-0195350_68	eggNOG-mapper	1321814.HMPREF9089_01469	Single-stranded DNA-binding protein	NA
UHGV-0195350_68	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0195350_68	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0195350_68	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0195350_68	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0195350_68	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0195350_70	PHROG	phrog_244	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0195350_70	eggNOG-mapper	1280692.AUJL01000044_gene2344	NA	NA
UHGV-0195350_70	Structural annotation	PF01870, MF_01490, NF040854, COG1591	NA	NA
UHGV-0195350_71	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0195350_71	PHROG	phrog_67	DNA methyltransferase	other
UHGV-0195350_71	UniRef90	UniRef90_UPI001D09885E	site-specific DNA-methyltransferase	NA
UHGV-0195350_71	eggNOG-mapper	658655.HMPREF0988_00878	DNA methylase	NA
UHGV-0195350_71	PADLOC	MTase_II_00157	Type II methyltransferase	RM
UHGV-0195350_71	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0195350_71	COG	COG0863	DNA modification methylase	NA
UHGV-0195350_71	Structural annotation	PF01555, MF_01872, NF010253, COG0863	NA	NA
UHGV-0195350_73	PHROG	phrog_4433	NA	unknown function
UHGV-0195350_73	eggNOG-mapper	886882.PPSC2_p0048	regulation of DNA-templated transcription, elongation	NA
UHGV-0195350_73	COG	COG5164	Transcription elongation factor SPT5	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0195350	Yes	42,520 bps	40.48%	99.90%	0.9775
UHGV-0180256	No	42,850 bps	40.57%	99.90%	0.9767