vOTU-065113

Overview

vOTU representative UHGV-0120526

No. of genomes 2

Genome length 26,311 bps

Completeness 99.90% (high-quality)

Host Ruminococcus E bromii B

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-065113
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00673 › vGENUS-00827 › vSUBGEN-06681 › vOTU-065113
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › Ruminococcus E › Ruminococcus E bromii B
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0120526
BioSample	SAMEA3879602
Genome length	26,311 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	44
CDS density	92.38%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0120526_1	KOfam	K14059	int; integrase	NA
UHGV-0120526_1	PHROG	phrog_1	integrase	integration and excision
UHGV-0120526_1	UniRef90	UniRef90_A0A2N0ULT2	Integrase	NA
UHGV-0120526_1	eggNOG-mapper	428125.CLOLEP_02743	Belongs to the 'phage' integrase family	NA
UHGV-0120526_1	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0120526_1	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0120526_1	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0120526_2	UniRef90	UniRef90_A0A374DTF3	NA	NA
UHGV-0120526_3	PHROG	phrog_1914	NA	unknown function
UHGV-0120526_3	UniRef90	UniRef90_A0A374NDM7	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-0120526_3	eggNOG-mapper	1160721.RBI_I01604	NA	NA
UHGV-0120526_3	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0120526_3	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0120526_3	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0120526_4	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0120526_4	UniRef90	UniRef90_UPI0015F3DE1D	helix-turn-helix domain-containing protein	NA
UHGV-0120526_4	eggNOG-mapper	411463.EUBVEN_00115	Helix-turn-helix domain	NA
UHGV-0120526_4	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0120526_4	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0120526_4	Structural annotation	PF13560, MF_00535, NF041951, COG1476	NA	NA
UHGV-0120526_5	UniRef90	UniRef90_UPI000E51362F	helix-turn-helix domain-containing protein	NA
UHGV-0120526_5	eggNOG-mapper	411461.DORFOR_00030	Helix-turn-helix XRE-family like proteins	NA
UHGV-0120526_5	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0120526_5	Structural annotation	PF13443, NF041951, COG1396	NA	NA
UHGV-0120526_6	PHROG	phrog_8684	NA	unknown function
UHGV-0120526_6	UniRef90	UniRef90_UPI000E48855B	YopX family protein	NA
UHGV-0120526_6	eggNOG-mapper	1458852.A0A059T7V5_9CAUD	YopX protein	NA
UHGV-0120526_6	Pfam	PF09643	YopX protein	YopX
UHGV-0120526_6	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0120526_6	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0120526_7	UniRef90	UniRef90_UPI0015F48AC0	Lar family restriction alleviation protein	NA
UHGV-0120526_7	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0120526_7	Structural annotation	PF14354, TIGR03655	NA	NA
UHGV-0120526_9	PHROG	phrog_4581	terminase small subunit	head and packaging
UHGV-0120526_9	UniRef90	UniRef90_UPI0018A90D59	HNH endonuclease	NA
UHGV-0120526_9	eggNOG-mapper	1414720.CBYM010000040_gene1642	HNH nucleases	NA
UHGV-0120526_9	Pfam	PF13671	AAA domain	AAA_33
UHGV-0120526_9	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0120526_10	UniRef90	UniRef90_A0A2N0ULT9	DNA binding domain, excisionase family	NA
UHGV-0120526_10	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0120526_10	NCBIFam	TIGR01764.1	excisionase family DNA-binding protein	NA
UHGV-0120526_10	COG	COG3311	DNA-binding transcriptional regulator AlpA	NA
UHGV-0120526_11	Structural annotation	COG1862	NA	NA
UHGV-0120526_13	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0120526_13	PHROG	phrog_6218	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0120526_13	UniRef90	UniRef90_UPI000E47CAB6	ParB/RepB/Spo0J family partition protein	NA
UHGV-0120526_13	eggNOG-mapper	394503.Ccel_3306	Belongs to the ParB family	NA
UHGV-0120526_13	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0120526_13	NCBIFam	TIGR00180.1	ParB/RepB/Spo0J family partition protein	NA
UHGV-0120526_13	COG	COG0710	3-dehydroquinate dehydratase	NA
UHGV-0120526_13	Structural annotation	PF18579, MF_02015, TIGR00180, COG1475	NA	NA
UHGV-0120526_14	PHROG	phrog_8684	NA	unknown function
UHGV-0120526_14	UniRef90	UniRef90_UPI000E48855B	YopX family protein	NA
UHGV-0120526_14	eggNOG-mapper	1450694.BTS2_0501	YopX protein	NA
UHGV-0120526_14	Pfam	PF09643	YopX protein	YopX
UHGV-0120526_14	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0120526_14	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0120526_15	PHROG	phrog_6058	NA	unknown function
UHGV-0120526_15	eggNOG-mapper	742738.HMPREF9460_00848	NA	NA
UHGV-0120526_15	Structural annotation	NF033787	NA	NA
UHGV-0120526_17	Structural annotation	PF19678, TIGR02610	NA	NA
UHGV-0120526_20	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0120526_20	eggNOG-mapper	1235800.C819_00515	NA	NA
UHGV-0120526_20	Structural annotation	PF21578, NF041486	NA	NA
UHGV-0120526_21	eggNOG-mapper	394503.Ccel_3053	NA	NA
UHGV-0120526_21	Structural annotation	TIGR01636	NA	NA
UHGV-0120526_22	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0120526_22	UniRef90	UniRef90_A0A373XNZ9	HNH endonuclease	NA
UHGV-0120526_22	eggNOG-mapper	500633.CLOHIR_00362	HNH endonuclease	NA
UHGV-0120526_22	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0120526_22	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0120526_23	PHROG	phrog_1066	NA	unknown function
UHGV-0120526_23	eggNOG-mapper	931276.Cspa_c10130	NA	NA
UHGV-0120526_24	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0120526_24	UniRef90	UniRef90_A0A373XNY0	Terminase large subunit	NA
UHGV-0120526_24	eggNOG-mapper	411468.CLOSCI_00551	COG COG4626 Phage terminase-like protein, large subunit	NA
UHGV-0120526_24	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0120526_24	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0120526_24	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0120526_24	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0120526_25	PHROG	phrog_12	portal protein	head and packaging
UHGV-0120526_25	UniRef90	UniRef90_A0A373XNZ6	Phage portal protein	NA
UHGV-0120526_25	eggNOG-mapper	411468.CLOSCI_00550	Phage portal protein	NA
UHGV-0120526_25	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0120526_25	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0120526_25	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0120526_26	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0120526_26	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0120526_26	UniRef90	UniRef90_A0A373XPG0	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0120526_26	eggNOG-mapper	1396.DJ87_978	Clp protease	NA
UHGV-0120526_26	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0120526_26	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0120526_26	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-0120526_27	PHROG	phrog_10	major head protein	head and packaging
UHGV-0120526_27	UniRef90	UniRef90_A0A373XLR3	Phage major capsid protein	NA
UHGV-0120526_27	eggNOG-mapper	411468.CLOSCI_00548	Phage capsid family	NA
UHGV-0120526_27	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0120526_27	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0120526_27	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0120526_28	PHROG	phrog_5223	neck protein	connector
UHGV-0120526_28	UniRef90	UniRef90_A0A174XIL0	NA	NA
UHGV-0120526_28	eggNOG-mapper	411468.CLOSCI_00547	NA	NA
UHGV-0120526_29	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-0120526_29	UniRef90	UniRef90_A0A373XMG4	Phage head-tail adapter protein	NA
UHGV-0120526_29	eggNOG-mapper	1536769.P40081_01090	head-tail adaptor	NA
UHGV-0120526_29	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0120526_29	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0120526_29	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0120526_30	UniRef90	UniRef90_UPI001A9B6FBF	HK97 gp10 family phage protein	NA
UHGV-0120526_30	eggNOG-mapper	1414720.CBYM010000040_gene1650	NA	NA
UHGV-0120526_30	Structural annotation	TIGR01725	NA	NA
UHGV-0120526_31	Structural annotation	PF12691	NA	NA
UHGV-0120526_32	PHROG	phrog_885	major tail protein	tail
UHGV-0120526_32	UniRef90	UniRef90_Q894J4	Conserved protein	NA
UHGV-0120526_32	eggNOG-mapper	1321814.HMPREF9089_00935	NA	NA
UHGV-0120526_32	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0120526_33	PHROG	phrog_1021	NA	unknown function
UHGV-0120526_35	PHROG	phrog_23464	NA	unknown function
UHGV-0120526_35	eggNOG-mapper	665950.HMPREF1025_02660	phage tail tape measure protein	NA
UHGV-0120526_35	COG	COG5283	Phage-related tail protein	NA
UHGV-0120526_35	Structural annotation	COG3941	NA	NA
UHGV-0120526_36	UniRef90	UniRef90_A0A1G5CPA2	Phage-related protein	NA
UHGV-0120526_36	eggNOG-mapper	1246.JMEA01000006_gene51	phage tail	NA
UHGV-0120526_36	COG	COG4722	Phage-related protein YomH	NA
UHGV-0120526_36	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0120526_37	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0120526_37	UniRef90	UniRef90_A0A348ZBV6	Prophage_tail domain-containing protein	NA
UHGV-0120526_37	eggNOG-mapper	1160721.RBI_I01574	Prophage endopeptidase tail	NA
UHGV-0120526_37	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0120526_37	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0120526_37	COG	COG4926	Phage-related protein	NA
UHGV-0120526_37	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0120526_38	UniRef90	UniRef90_A0A374N9Y2	NA	NA
UHGV-0120526_38	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0120526_38	Structural annotation	PF10651, PF08931, TIGR02268	NA	NA
UHGV-0120526_40	UniRef90	UniRef90_A0A374MYZ3	Branched-chain amino acid ABC transporter permease	NA
UHGV-0120526_40	eggNOG-mapper	1007096.BAGW01000032_gene1580	NA	NA
UHGV-0120526_41	PHROG	phrog_881	holin	lysis
UHGV-0120526_41	UniRef90	UniRef90_A0A4Q7P349	Dp-1 family holin	NA
UHGV-0120526_41	eggNOG-mapper	742740.HMPREF9474_02251	Putative phage holin Dp-1	NA
UHGV-0120526_41	Pfam	PF16938	Putative phage holin Dp-1	Phage_holin_Dp1
UHGV-0120526_41	Structural annotation	PF16938	NA	NA
UHGV-0120526_42	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0120526_42	PHROG	phrog_1794	amidase	lysis
UHGV-0120526_42	UniRef90	UniRef90_A0A373KFY8	SH3b domain-containing protein	NA
UHGV-0120526_42	eggNOG-mapper	1519439.JPJG01000059_gene1952	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0120526_42	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0120526_42	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0120526_42	Structural annotation	PF01520, PF01471, MF_00562, TIGR02883, TIGR03979, COG0860, COG3409	NA	NA
UHGV-0120526_43	UniRef90	UniRef90_UPI001B3C704F	helix-turn-helix domain-containing protein	NA
UHGV-0120526_43	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0120526	Yes	26,311 bps	40.28%	99.90%	0.9768
UHGV-1497198	No	14,998 bps	41.47%	61.44%	0.9791