vOTU-065882

Overview

vOTU representative UHGV-0193757

No. of genomes 5

Genome length 39,368 bps

Completeness 99.90% (high-quality)

Host Enterococcus D gallinarum

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-065882
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 › vSUBFAM-05053 › vGENUS-10108 › vSUBGEN-12831 › vOTU-065882
Host taxonomy	Bacteria › Firmicutes › Bacilli › Lactobacillales › Enterococcaceae › Enterococcus D › Enterococcus D gallinarum
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0193757
BioSample	SAMN05827131
Genome length	39,368 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	65
CDS density	94.63%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0193757_1	KOfam	K14059	int; integrase	NA
UHGV-0193757_1	PHROG	phrog_1	integrase	integration and excision
UHGV-0193757_1	UniRef90	UniRef90_A0A376H614	Integrase, putative	NA
UHGV-0193757_1	eggNOG-mapper	1234679.BN424_3334	Belongs to the 'phage' integrase family	NA
UHGV-0193757_1	Pfam	PF13102	Phage integrase SAM-like domain	Phage_int_SAM_5
UHGV-0193757_1	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0193757_1	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0193757_1	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0193757_2	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0193757_2	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0193757_2	UniRef90	UniRef90_UPI0011DD0441	XRE family transcriptional regulator	NA
UHGV-0193757_2	eggNOG-mapper	1140002.I570_02881	Peptidase S24-like	NA
UHGV-0193757_2	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0193757_2	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0193757_2	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0193757_2	Structural annotation	PF00717, PF01381, MF_00015, TIGR00498, COG2932	NA	NA
UHGV-0193757_3	UniRef90	UniRef90_UPI0011DDEF96	helix-turn-helix transcriptional regulator	NA
UHGV-0193757_3	eggNOG-mapper	1140002.I570_02882	Helix-turn-helix XRE-family like proteins	NA
UHGV-0193757_3	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0193757_3	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0193757_3	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0193757_4	PHROG	phrog_904	excisionase	integration and excision
UHGV-0193757_4	UniRef90	UniRef90_A0A376H781	Excisionase	NA
UHGV-0193757_4	eggNOG-mapper	226185.EF_0309	NA	NA
UHGV-0193757_5	Structural annotation	PF13035	NA	NA
UHGV-0193757_6	PHROG	phrog_38261	NA	unknown function
UHGV-0193757_7	PHROG	phrog_6930	NA	unknown function
UHGV-0193757_10	PHROG	phrog_4690	NA	unknown function
UHGV-0193757_10	eggNOG-mapper	1158602.I590_00673	NA	NA
UHGV-0193757_11	eggNOG-mapper	565653.EGBG_01942	NA	NA
UHGV-0193757_11	Structural annotation	PF00410, MF_01302_B	NA	NA
UHGV-0193757_13	PHROG	phrog_31313	NA	unknown function
UHGV-0193757_13	UniRef90	UniRef90_C9A174	Predicted protein	NA
UHGV-0193757_13	eggNOG-mapper	1158604.I591_00507	NA	NA
UHGV-0193757_13	Structural annotation	PF09466	NA	NA
UHGV-0193757_14	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0193757_14	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0193757_14	UniRef90	UniRef90_UPI0011DC7520	recombinase RecT	NA
UHGV-0193757_14	eggNOG-mapper	565653.EGBG_01944	RecT family	NA
UHGV-0193757_14	Pfam	PF03837	RecT family	RecT
UHGV-0193757_14	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0193757_14	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-0193757_15	KOfam	K16899	addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]	NA
UHGV-0193757_15	PHROG	phrog_1227	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0193757_15	UniRef90	UniRef90_UPI0011DDFEF3	PD-(D/E)XK nuclease-like domain-containing protein	NA
UHGV-0193757_15	eggNOG-mapper	565653.EGBG_01945	NA	NA
UHGV-0193757_15	Pfam	PF12684	NA	DUF3799
UHGV-0193757_15	COG	COG1074	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	NA
UHGV-0193757_15	Structural annotation	PF12684, TIGR01896, COG4343	NA	NA
UHGV-0193757_16	PHROG	phrog_2514	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0193757_16	UniRef90	UniRef90_C9A177	NA	NA
UHGV-0193757_16	eggNOG-mapper	565653.EGBG_01946	DnaD domain protein	NA
UHGV-0193757_16	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0193757_16	Structural annotation	TIGR01610	NA	NA
UHGV-0193757_17	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-0193757_17	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0193757_17	UniRef90	UniRef90_UPI0015593BA4	ATP-binding protein	NA
UHGV-0193757_17	eggNOG-mapper	565653.EGBG_01947	DNA replication protein	NA
UHGV-0193757_17	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-0193757_17	COG	COG1484	DNA replication protein DnaC	NA
UHGV-0193757_17	Structural annotation	PF01695, MF_00377, NF005931, COG1484	NA	NA
UHGV-0193757_18	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0193757_18	UniRef90	UniRef90_UPI001558645B	NA	NA
UHGV-0193757_18	eggNOG-mapper	565653.EGBG_01948	NA	NA
UHGV-0193757_18	Pfam	PF06356	NA	DUF1064
UHGV-0193757_20	UniRef90	UniRef90_C9A180	Predicted protein	NA
UHGV-0193757_21	PHROG	phrog_5403	NA	unknown function
UHGV-0193757_21	UniRef90	UniRef90_V5XLE1	Gp58	NA
UHGV-0193757_21	eggNOG-mapper	565653.EGBG_01950	NA	NA
UHGV-0193757_22	UniRef90	UniRef90_C9A182	Predicted protein	NA
UHGV-0193757_22	eggNOG-mapper	565653.EGBG_01951	NA	NA
UHGV-0193757_22	Structural annotation	PF06056	NA	NA
UHGV-0193757_23	PHROG	phrog_28610	NA	unknown function
UHGV-0193757_24	UniRef90	UniRef90_C9A183	Predicted protein	NA
UHGV-0193757_24	eggNOG-mapper	565653.EGBG_01952	NA	NA
UHGV-0193757_25	PHROG	phrog_2131	NA	unknown function
UHGV-0193757_25	UniRef90	UniRef90_O34053	ORF22	NA
UHGV-0193757_25	eggNOG-mapper	85154.O34053_BPO12	NA	NA
UHGV-0193757_26	PHROG	phrog_986	RNA-binding protein	DNA, RNA and nucleotide metabolism
UHGV-0193757_26	UniRef90	UniRef90_UPI001E5BE6D0	NA	NA
UHGV-0193757_26	eggNOG-mapper	226185.EF_2118	NA	NA
UHGV-0193757_26	Pfam	PF12961	NA	DUF3850
UHGV-0193757_27	PHROG	phrog_14113	NA	unknown function
UHGV-0193757_28	PHROG	phrog_98	NA	unknown function
UHGV-0193757_28	UniRef90	UniRef90_UPI0011DD52D6	YopX family protein	NA
UHGV-0193757_28	eggNOG-mapper	1567011.A0A0A7RWK2_9VIRU	YopX protein	NA
UHGV-0193757_28	Pfam	PF09643	YopX protein	YopX
UHGV-0193757_28	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0193757_29	PHROG	phrog_2776	NA	unknown function
UHGV-0193757_29	UniRef90	UniRef90_K8E4E2	Lin2596 protein	NA
UHGV-0193757_29	eggNOG-mapper	663241.C9E2P0_9CAUD	NA	NA
UHGV-0193757_29	Structural annotation	PF06319, NF033832, COG5321	NA	NA
UHGV-0193757_30	UniRef90	UniRef90_C9A187	Predicted protein	NA
UHGV-0193757_32	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0193757_32	UniRef90	UniRef90_C9A188	NA	NA
UHGV-0193757_32	eggNOG-mapper	565653.EGBG_01957	NA	NA
UHGV-0193757_32	Structural annotation	PF04545, MF_00674, TIGR02984	NA	NA
UHGV-0193757_33	PHROG	phrog_11520	NA	unknown function
UHGV-0193757_33	UniRef90	UniRef90_A0A0V8CX39	NA	NA
UHGV-0193757_33	eggNOG-mapper	1201292.DR75_1519	NA	NA
UHGV-0193757_33	Structural annotation	PF14337	NA	NA
UHGV-0193757_34	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0193757_34	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0193757_34	UniRef90	UniRef90_UPI0011DDAD62	terminase small subunit	NA
UHGV-0193757_34	eggNOG-mapper	1158614.I592_02434	Terminase small subunit	NA
UHGV-0193757_34	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0193757_34	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0193757_35	PHROG	phrog_30251	terminase large subunit	head and packaging
UHGV-0193757_35	UniRef90	UniRef90_UPI00115B4A11	phage terminase large subunit	NA
UHGV-0193757_35	eggNOG-mapper	1158614.I592_02433	Terminase-like family	NA
UHGV-0193757_35	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-0193757_35	COG	COG5410	NA	NA
UHGV-0193757_35	Structural annotation	PF17289, PF03237, MF_04147, NF033889, COG5410, COG5362	NA	NA
UHGV-0193757_36	PHROG	phrog_64	portal protein	head and packaging
UHGV-0193757_36	UniRef90	UniRef90_A0A376H642	Portal protein	NA
UHGV-0193757_36	eggNOG-mapper	1158602.I590_02557	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0193757_36	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0193757_36	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0193757_37	PHROG	phrog_595	head maturation protease	head and packaging
UHGV-0193757_37	UniRef90	UniRef90_UPI001C8B149A	phage head morphogenesis protein	NA
UHGV-0193757_37	eggNOG-mapper	1158602.I590_02559	Phage Mu protein F like protein	NA
UHGV-0193757_37	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0193757_37	COG	COG2369	NA	NA
UHGV-0193757_38	PHROG	phrog_5859	NA	unknown function
UHGV-0193757_38	eggNOG-mapper	565664.EFXG_02666	NA	NA
UHGV-0193757_38	Structural annotation	PF03927, MF_02200, NF009840, COG3471	NA	NA
UHGV-0193757_40	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0193757_40	UniRef90	UniRef90_A0A376H811	Scaffold protein	NA
UHGV-0193757_40	eggNOG-mapper	226185.EF_0338	Phage minor structural protein GP20	NA
UHGV-0193757_40	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0193757_40	Structural annotation	PF06810	NA	NA
UHGV-0193757_41	PHROG	phrog_212	major head protein	head and packaging
UHGV-0193757_41	UniRef90	UniRef90_UPI00189E8B07	phage capsid protein	NA
UHGV-0193757_41	eggNOG-mapper	1196028.ALEF01000043_gene464	NA	NA
UHGV-0193757_41	Structural annotation	PF05065, MF_04119, NF041162, COG4653	NA	NA
UHGV-0193757_42	PHROG	phrog_15682	NA	unknown function
UHGV-0193757_42	eggNOG-mapper	1497679.EP56_07560	NA	NA
UHGV-0193757_43	PHROG	phrog_1236	head protein	head and packaging
UHGV-0193757_43	UniRef90	UniRef90_R9QLM1	Structural protein	NA
UHGV-0193757_43	eggNOG-mapper	1158602.I590_02567	NA	NA
UHGV-0193757_43	Structural annotation	PF05135	NA	NA
UHGV-0193757_44	PHROG	phrog_1059	head-tail adaptor	connector
UHGV-0193757_44	UniRef90	UniRef90_A0A3D1J9B0	Phage head-tail adapter protein	NA
UHGV-0193757_44	eggNOG-mapper	1123312.KB904569_gene351	NA	NA
UHGV-0193757_44	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0193757_44	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0193757_45	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0193757_45	UniRef90	UniRef90_R2NYH0	HK97 gp10 family phage protein	NA
UHGV-0193757_45	eggNOG-mapper	1158602.I590_02569	NA	NA
UHGV-0193757_45	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0193757_45	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0193757_45	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0193757_46	PHROG	phrog_957	head protein	head and packaging
UHGV-0193757_46	eggNOG-mapper	1158602.I590_02570	NA	NA
UHGV-0193757_47	PHROG	phrog_885	major tail protein	tail
UHGV-0193757_47	UniRef90	UniRef90_A0A098ANP7	Putative prophage protein	NA
UHGV-0193757_47	eggNOG-mapper	1158602.I590_02571	NA	NA
UHGV-0193757_47	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0193757_49	PHROG	phrog_1021	NA	unknown function
UHGV-0193757_50	PHROG	phrog_30816	NA	unknown function
UHGV-0193757_51	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-0193757_51	UniRef90	UniRef90_UPI00189E6A9F	phage tail protein	NA
UHGV-0193757_51	eggNOG-mapper	374526.A5GYM8_9CAUD	NA	NA
UHGV-0193757_51	Structural annotation	MF_04138, COG5281	NA	NA
UHGV-0193757_52	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0193757_52	UniRef90	UniRef90_S4B197	Phage tail component protein	NA
UHGV-0193757_52	eggNOG-mapper	1158602.I590_02575	tail component	NA
UHGV-0193757_52	COG	COG4722	Phage-related protein YomH	NA
UHGV-0193757_52	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0193757_53	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0193757_53	UniRef90	UniRef90_A0A376H304	Phage minor structural protein, N-terminal region domain protein	NA
UHGV-0193757_53	eggNOG-mapper	226185.EF_2001	Prophage endopeptidase tail	NA
UHGV-0193757_53	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0193757_53	Pfam	PF21277	Type VI secretion system spike protein VgrG3-like, C-terminal	T6SS_VgrG3-like_C
UHGV-0193757_53	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0193757_53	COG	COG4926	Phage-related protein	NA
UHGV-0193757_54	PHROG	phrog_7158	NA	unknown function
UHGV-0193757_54	UniRef90	UniRef90_UPI0011CA6C46	metallophosphoesterase	NA
UHGV-0193757_54	eggNOG-mapper	1158604.I591_00414	GDSL-like Lipase/Acylhydrolase	NA
UHGV-0193757_54	Pfam	PF00149	Calcineurin-like phosphoesterase	Metallophos
UHGV-0193757_54	COG	COG2755	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	NA
UHGV-0193757_54	Structural annotation	PF10651, PF14582, MF_02044, NF041754, COG5555, COG3470	NA	NA
UHGV-0193757_57	PHROG	phrog_4105	NA	unknown function
UHGV-0193757_57	eggNOG-mapper	1139219.I569_01365	NA	NA
UHGV-0193757_58	PHROG	phrog_881	holin	lysis
UHGV-0193757_58	UniRef90	UniRef90_A0A377MPF1	Holin	NA
UHGV-0193757_58	eggNOG-mapper	1239381.K4JTH6_9CAUD	Pfam:Phage_holin_Dp1	NA
UHGV-0193757_58	Pfam	PF16938	Putative phage holin Dp-1	Phage_holin_Dp1
UHGV-0193757_58	Structural annotation	PF16938	NA	NA
UHGV-0193757_59	PHROG	phrog_10973	NA	unknown function
UHGV-0193757_61	PHROG	phrog_21357	endolysin	lysis
UHGV-0193757_61	UniRef90	UniRef90_F0EPA6	Cpl-7 lysozyme C-terminal domain protein	NA
UHGV-0193757_61	eggNOG-mapper	483218.BACPEC_01324	amidase activity	NA
UHGV-0193757_61	Pfam	PF05257	CHAP domain	CHAP
UHGV-0193757_61	Pfam	PF08230	CW_7 repeat	CW_7
UHGV-0193757_61	COG	COG1388	LysM repeat	NA
UHGV-0193757_61	Structural annotation	PF00877, TIGR02594, COG3738	NA	NA
UHGV-0193757_62	PHROG	phrog_4525	NA	unknown function
UHGV-0193757_62	UniRef90	UniRef90_A0A0F7PX83	Putative lipoprotein	NA
UHGV-0193757_64	KOfam	K22409	sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0193757_64	PHROG	phrog_37326	NA	unknown function
UHGV-0193757_64	UniRef90	UniRef90_A0A376H0J2	LysM domain lipoprotein	NA
UHGV-0193757_64	eggNOG-mapper	1158602.I590_02589	LysM domain	NA
UHGV-0193757_64	Pfam	PF01476	LysM domain	LysM
UHGV-0193757_64	COG	COG1388	LysM repeat	NA
UHGV-0193757_65	PHROG	phrog_10934	NA	unknown function
UHGV-0193757_65	eggNOG-mapper	1231377.C426_0907	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0193757	Yes	39,368 bps	37.51%	99.90%	0.9683
UHGV-1438350	No	32,286 bps	37.99%	87.50%	0.9703
UHGV-0230622	No	30,231 bps	37.91%	78.67%	0.9747
UHGV-1409601	No	25,792 bps	37.95%	67.57%	0.9745
UHGV-0148282	No	13,448 bps	38.42%	34.96%	0.9788