vOTU-066693

Overview

vOTU representative UHGV-2029182

No. of genomes 5

Genome length 40,493 bps

Completeness 95.97% (high-quality)

Host Faecalibacterium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-066693
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00013 › vGENUS-14106 › vSUBGEN-23358 › vOTU-066693
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2029182
BioSample	SAMEA2737795
Genome length	40,493 bps
CheckV completeness	95.97% (high-quality)
CheckV contamination	0.00%
CDS count	67
CDS density	89.97%
tRNA count	4
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2029182_1	PHROG	phrog_27197	NA	unknown function
UHGV-2029182_1	eggNOG-mapper	394503.Ccel_3068	regulation of DNA-templated transcription, elongation	NA
UHGV-2029182_1	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-2029182_1	Structural annotation	NF007410	NA	NA
UHGV-2029182_2	UniRef90	UniRef90_UPI00130EBC54	NA	NA
UHGV-2029182_2	eggNOG-mapper	445972.ANACOL_01800	NA	NA
UHGV-2029182_2	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-2029182_2	Structural annotation	PF05339, MF_00535, NF041951, COG3655	NA	NA
UHGV-2029182_3	Structural annotation	PF12270, NF040944	NA	NA
UHGV-2029182_4	Structural annotation	PF09537	NA	NA
UHGV-2029182_6	PHROG	phrog_674	NA	unknown function
UHGV-2029182_6	UniRef90	UniRef90_A0A3E2UDL3	NA	NA
UHGV-2029182_6	eggNOG-mapper	742722.HMPREF9463_00201	NA	NA
UHGV-2029182_6	Pfam	PF07083	NA	DUF1351
UHGV-2029182_6	Structural annotation	PF07083	NA	NA
UHGV-2029182_7	PHROG	phrog_2760	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-2029182_7	UniRef90	UniRef90_A0A3E2UDI4	Phage recombination protein Bet	NA
UHGV-2029182_7	eggNOG-mapper	1235794.C811_01355	RecT family	NA
UHGV-2029182_7	Pfam	PF03837	RecT family	RecT
UHGV-2029182_7	NCBIFam	TIGR01913.1	phage recombination protein Bet	NA
UHGV-2029182_7	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-2029182_7	Structural annotation	PF03837, TIGR01913, COG3723	NA	NA
UHGV-2029182_8	Structural annotation	PF00436, MF_00720, NF004512, COG0629	NA	NA
UHGV-2029182_9	KOfam	K02086	dnaD; DNA replication protein	NA
UHGV-2029182_9	PHROG	phrog_6251	replisome organizer DnaA-like	DNA, RNA and nucleotide metabolism
UHGV-2029182_9	UniRef90	UniRef90_UPI001CBE9731	DnaD domain protein	NA
UHGV-2029182_9	eggNOG-mapper	447909.A6M985_9VIRU	calcium ion binding	NA
UHGV-2029182_9	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-2029182_9	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-2029182_9	Structural annotation	PF09681, PF07261, TIGR01714, TIGR01446, COG3935	NA	NA
UHGV-2029182_10	Structural annotation	PF11417	NA	NA
UHGV-2029182_12	PHROG	phrog_757	DNA methyltransferase	other
UHGV-2029182_12	UniRef90	UniRef90_UPI001C00B13F	DNA cytosine methyltransferase	NA
UHGV-2029182_12	eggNOG-mapper	748224.HMPREF9436_03069	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-2029182_12	COG	COG0270	DNA-cytosine methylase	NA
UHGV-2029182_15	PHROG	phrog_3136	NA	unknown function
UHGV-2029182_15	UniRef90	UniRef90_UPI001CBCD733	ASCH domain-containing protein	NA
UHGV-2029182_15	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-2029182_15	Structural annotation	PF12961, NF008917, COG4933	NA	NA
UHGV-2029182_16	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-2029182_16	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-2029182_16	UniRef90	UniRef90_A0A844DBG8	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-2029182_16	eggNOG-mapper	875454.BAEW01000002_gene491	Endodeoxyribonuclease RusA	NA
UHGV-2029182_16	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-2029182_16	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-2029182_16	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-2029182_18	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-2029182_18	Structural annotation	PF07374, MF_00245, TIGR01636, COG2739	NA	NA
UHGV-2029182_19	UniRef90	UniRef90_U2R3C0	Nascent polypeptide-associated complex domain protein	NA
UHGV-2029182_19	eggNOG-mapper	1226322.HMPREF1545_00042	NA	NA
UHGV-2029182_19	Structural annotation	PF04218	NA	NA
UHGV-2029182_20	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-2029182_20	PHROG	phrog_10250	NA	unknown function
UHGV-2029182_20	UniRef90	UniRef90_A0A844D8I4	PBSX family phage terminase large subunit	NA
UHGV-2029182_20	eggNOG-mapper	411490.ANACAC_00783	Phage terminase, large subunit, PBSX family	NA
UHGV-2029182_20	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-2029182_20	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-2029182_20	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-2029182_20	COG	COG1783	Phage terminase large subunit	NA
UHGV-2029182_20	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-2029182_21	PHROG	phrog_64	portal protein	head and packaging
UHGV-2029182_21	UniRef90	UniRef90_A0A6N7TNT3	Phage portal protein	NA
UHGV-2029182_21	eggNOG-mapper	642492.Clole_2764	phage portal protein, SPP1	NA
UHGV-2029182_21	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-2029182_21	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-2029182_23	PHROG	phrog_2468	head morphogenesis	head and packaging
UHGV-2029182_23	UniRef90	UniRef90_A0A844DBI4	Phage_Mu_F domain-containing protein	NA
UHGV-2029182_23	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-2029182_23	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-2029182_23	COG	COG2369	NA	NA
UHGV-2029182_23	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-2029182_24	eggNOG-mapper	706437.HMPREF0813_02005	NA	NA
UHGV-2029182_25	PHROG	phrog_8680	NA	unknown function
UHGV-2029182_25	UniRef90	UniRef90_A0A844D688	NA	NA
UHGV-2029182_25	eggNOG-mapper	1423790.BN53_04265	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-2029182_25	Pfam	PF14386	NA	DUF4417
UHGV-2029182_25	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-2029182_25	Structural annotation	PF14386	NA	NA
UHGV-2029182_27	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-2029182_27	UniRef90	UniRef90_A0A6N7TNP6	HK97 gp10 family phage protein	NA
UHGV-2029182_27	eggNOG-mapper	1123309.AQYB01000018_gene814	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-2029182_27	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-2029182_27	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-2029182_29	Structural annotation	PF06810	NA	NA
UHGV-2029182_30	PHROG	phrog_544	major head protein	head and packaging
UHGV-2029182_30	UniRef90	UniRef90_R0BKA1	S-l_SbsC_C domain-containing protein	NA
UHGV-2029182_30	eggNOG-mapper	476272.RUMHYD_01776	NA	NA
UHGV-2029182_30	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-2029182_32	PHROG	phrog_17977	NA	unknown function
UHGV-2029182_32	UniRef90	UniRef90_A0A844DHJ8	Phage head closure protein	NA
UHGV-2029182_32	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2029182_33	Structural annotation	PF13554	NA	NA
UHGV-2029182_34	PHROG	phrog_885	major tail protein	tail
UHGV-2029182_34	eggNOG-mapper	1111121.HMPREF1247_0789	NA	NA
UHGV-2029182_34	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-2029182_37	PHROG	phrog_1686	tail length tape measure protein	tail
UHGV-2029182_37	UniRef90	UniRef90_A0A6N7TLD3	Tape measure protein	NA
UHGV-2029182_37	eggNOG-mapper	1492737.FEM08_12070	tape measure	NA
UHGV-2029182_37	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-2029182_37	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-2029182_37	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-2029182_37	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-2029182_38	UniRef90	UniRef90_A0A415UCK7	MtfA protein	NA
UHGV-2029182_38	eggNOG-mapper	1111121.HMPREF1247_1241	NA	NA
UHGV-2029182_38	Structural annotation	PF05709, TIGR01633, COG4722	NA	NA
UHGV-2029182_39	PHROG	phrog_3558	tail protein	tail
UHGV-2029182_39	UniRef90	UniRef90_UPI001C01D15B	phage tail protein	NA
UHGV-2029182_39	eggNOG-mapper	1035184.HMPREF1042_1326	Prophage endopeptidase tail	NA
UHGV-2029182_39	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-2029182_39	COG	COG4926	Phage-related protein	NA
UHGV-2029182_39	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-2029182_40	PHROG	phrog_5240	tail fiber protein	tail
UHGV-2029182_40	UniRef90	UniRef90_A0A2H4J709	SGNH_hydro domain-containing protein	NA
UHGV-2029182_40	eggNOG-mapper	483218.BACPEC_02431	GDSL-like Lipase/Acylhydrolase family	NA
UHGV-2029182_40	Pfam	PF13472	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
UHGV-2029182_40	COG	COG2755	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	NA
UHGV-2029182_41	KOfam	K07273	acm; lysozyme	NA
UHGV-2029182_41	PHROG	phrog_291	endolysin	lysis
UHGV-2029182_41	UniRef90	UniRef90_A0A564U0D3	Autolytic lysozyme	NA
UHGV-2029182_41	eggNOG-mapper	718252.FP2_04890	hydrolase, family 25	NA
UHGV-2029182_41	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-2029182_41	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-2029182_41	Structural annotation	PF01183, TIGR04053, COG3757	NA	NA
UHGV-2029182_42	PHROG	phrog_1863	NA	unknown function
UHGV-2029182_42	eggNOG-mapper	718252.FP2_04900	NA	NA
UHGV-2029182_43	PHROG	phrog_15303	NA	unknown function
UHGV-2029182_44	Structural annotation	PF07374, MF_00245, NF001072, COG2739	NA	NA
UHGV-2029182_45	PHROG	phrog_5765	NA	unknown function
UHGV-2029182_45	UniRef90	UniRef90_UPI001D0EF465	BC1881 family protein	NA
UHGV-2029182_45	eggNOG-mapper	1095750.HMPREF9970_1008	NA	NA
UHGV-2029182_45	NCBIFam	NF033495.1	BC1881 family protein	NA
UHGV-2029182_46	KOfam	K23779	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	NA
UHGV-2029182_46	PHROG	phrog_1373	transcriptional regulator	transcription regulation
UHGV-2029182_46	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2029182_46	COG	COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	NA
UHGV-2029182_46	Structural annotation	PF01381, TIGR03070, COG1396	NA	NA
UHGV-2029182_48	PHROG	phrog_3754	NA	unknown function
UHGV-2029182_48	eggNOG-mapper	1235790.C805_00054	NA	NA
UHGV-2029182_49	PHROG	phrog_21718	NA	unknown function
UHGV-2029182_49	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-2029182_50	PHROG	phrog_22984	NA	unknown function
UHGV-2029182_51	PHROG	phrog_16490	NA	unknown function
UHGV-2029182_51	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-2029182_53	PHROG	phrog_20016	NA	unknown function
UHGV-2029182_53	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-2029182_53	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-2029182_53	Structural annotation	PF18573, NF033147	NA	NA
UHGV-2029182_54	Structural annotation	PF12510	NA	NA
UHGV-2029182_56	KOfam	K14059	int; integrase	NA
UHGV-2029182_56	PHROG	phrog_1	integrase	integration and excision
UHGV-2029182_56	UniRef90	UniRef90_A0A6N7TNQ4	Tyrosine-type recombinase/integrase	NA
UHGV-2029182_56	eggNOG-mapper	411471.SUBVAR_05137	Belongs to the 'phage' integrase family	NA
UHGV-2029182_56	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2029182_56	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-2029182_56	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-2029182_57	UniRef90	UniRef90_A0A6N7TLT0	Helix-turn-helix domain-containing protein	NA
UHGV-2029182_57	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2029182_57	Structural annotation	PF13560, MF_00535, NF041951, COG1396	NA	NA
UHGV-2029182_60	PHROG	phrog_888	NA	unknown function
UHGV-2029182_60	UniRef90	UniRef90_A0A6N7TMA2	SHOCT domain-containing protein	NA
UHGV-2029182_60	eggNOG-mapper	1415774.U728_165	Short C-terminal domain	NA
UHGV-2029182_60	Pfam	PF14471	NA	DUF4428
UHGV-2029182_60	Pfam	PF09851	Short C-terminal domain	SHOCT
UHGV-2029182_60	Structural annotation	PF15947, PF14471	NA	NA
UHGV-2029182_63	Structural annotation	PF09202, MF_01819, NF041230, COG1321	NA	NA
UHGV-2029182_64	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2029182_64	UniRef90	UniRef90_UPI001966F1BB	helix-turn-helix transcriptional regulator	NA
UHGV-2029182_64	eggNOG-mapper	1226322.HMPREF1545_00148	Transcriptional	NA
UHGV-2029182_64	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2029182_64	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2029182_64	Structural annotation	PF01381, MF_00535, NF041951, COG3655	NA	NA
UHGV-2029182_65	UniRef90	UniRef90_A0A1C7FQD9	Transcriptional regulator	NA
UHGV-2029182_65	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2029182_65	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-2029182_66	PHROG	phrog_463	anti-repressor	transcription regulation
UHGV-2029182_66	UniRef90	UniRef90_UPI00137B411D	ORF6C domain-containing protein	NA
UHGV-2029182_66	eggNOG-mapper	411490.ANACAC_00813	BRO family, N-terminal domain	NA
UHGV-2029182_66	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-2029182_66	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-2029182_66	COG	COG3617	Prophage antirepressor	NA
UHGV-2029182_66	Structural annotation	PF10552, PF02498, TIGR02681, COG3617	NA	NA
UHGV-2029182_67	PHROG	phrog_4433	NA	unknown function
UHGV-2029182_67	eggNOG-mapper	33035.JPJF01000122_gene2458	regulation of DNA-templated transcription, elongation	NA
UHGV-2029182_67	COG	COG5164	Transcription elongation factor SPT5	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2029182	Yes	40,493 bps	53.48%	95.97%	0.9807
UHGV-0085104	No	32,496 bps	53.90%	76.98%	0.9828
UHGV-1399451	No	32,496 bps	53.90%	76.98%	0.9828
UHGV-1465360	No	21,192 bps	53.34%	50.28%	0.9787
UHGV-0188867	No	13,759 bps	54.52%	32.53%	0.9835