vOTU-067574

Overview

vOTU representative UHGV-0141947

No. of genomes 4

Genome length 35,408 bps

Completeness 91.63% (high-quality)

Host Enterococcus B hirae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-067574
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 › vSUBFAM-00386 › vGENUS-05429 › vSUBGEN-33114 › vOTU-067574
Host taxonomy	Bacteria › Firmicutes › Bacilli › Lactobacillales › Enterococcaceae › Enterococcus B › Enterococcus B hirae
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0141947
BioSample	SAMN05826500
Genome length	35,408 bps
CheckV completeness	91.63% (high-quality)
CheckV contamination	0.00%
CDS count	52
CDS density	88.19%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0141947_1	KOfam	K03704	cspA; cold shock protein	NA
UHGV-0141947_1	PHROG	phrog_729	cold shock protein	other
UHGV-0141947_1	UniRef90	UniRef90_R2MC62	Cold shock protein 2	NA
UHGV-0141947_1	eggNOG-mapper	1104325.M7W_2025	Cold shock	NA
UHGV-0141947_1	PADLOC	retron_type_V_csd_cluster85_1	NA	Retron
UHGV-0141947_1	Pfam	PF00313	'Cold-shock' DNA-binding domain	CSD
UHGV-0141947_1	COG	COG1278	Cold shock protein, CspA family	NA
UHGV-0141947_1	Structural annotation	PF00313, NF007062, COG1278	NA	NA
UHGV-0141947_2	PHROG	phrog_30113	NA	unknown function
UHGV-0141947_2	UniRef90	UniRef90_UPI00033050BC	NA	NA
UHGV-0141947_2	eggNOG-mapper	1158604.I591_00418	NA	NA
UHGV-0141947_2	Pfam	PF12686	NA	DUF3800
UHGV-0141947_2	Structural annotation	PF01351, MF_00052_A, TIGR00729, COG1039	NA	NA
UHGV-0141947_3	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0141947_3	PHROG	phrog_2338	endolysin	lysis
UHGV-0141947_3	UniRef90	UniRef90_A0A377MS14	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0141947_3	eggNOG-mapper	768486.EHR_09650	Ami_2	NA
UHGV-0141947_3	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0141947_3	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0141947_3	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-0141947_4	PHROG	phrog_881	holin	lysis
UHGV-0141947_4	UniRef90	UniRef90_C9AN11	Holin	NA
UHGV-0141947_4	eggNOG-mapper	768486.EHR_09645	Putative phage holin Dp-1	NA
UHGV-0141947_4	Pfam	PF16938	Putative phage holin Dp-1	Phage_holin_Dp1
UHGV-0141947_4	Structural annotation	PF16938, COG3237	NA	NA
UHGV-0141947_5	PHROG	phrog_134	NA	unknown function
UHGV-0141947_5	UniRef90	UniRef90_A0A4Q1WNL6	XkdX family protein	NA
UHGV-0141947_5	eggNOG-mapper	1104325.M7W_1371	Phage uncharacterised protein (Phage_XkdX)	NA
UHGV-0141947_5	Pfam	PF09693	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
UHGV-0141947_5	Structural annotation	PF09693, TIGR01669	NA	NA
UHGV-0141947_6	PHROG	phrog_1536	NA	unknown function
UHGV-0141947_6	eggNOG-mapper	768486.EHR_09865	NA	NA
UHGV-0141947_7	eggNOG-mapper	768486.EHR_09860	NA	NA
UHGV-0141947_8	PHROG	phrog_6907	NA	unknown function
UHGV-0141947_8	UniRef90	UniRef90_UPI001A8F63C0	collagen-like protein	NA
UHGV-0141947_8	eggNOG-mapper	1158607.UAU_01046	NA	NA
UHGV-0141947_9	PHROG	phrog_9625	NA	unknown function
UHGV-0141947_9	eggNOG-mapper	1158607.UAU_01045	NA	NA
UHGV-0141947_10	PHROG	phrog_6042	minor head protein	head and packaging
UHGV-0141947_10	UniRef90	UniRef90_A0A366UEB4	BppU_N domain-containing protein	NA
UHGV-0141947_10	eggNOG-mapper	1158607.UAU_01044	NA	NA
UHGV-0141947_10	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0141947_10	Structural annotation	PF10651, NF040788	NA	NA
UHGV-0141947_11	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0141947_11	UniRef90	UniRef90_A0A1L8WI77	Phage minor structural protein	NA
UHGV-0141947_11	eggNOG-mapper	1158614.I592_02417	Prophage endopeptidase tail	NA
UHGV-0141947_11	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0141947_11	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-0141947_11	Pfam	PF05257	CHAP domain	CHAP
UHGV-0141947_11	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0141947_11	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0141947_11	Structural annotation	PF14594, PF01551, PF18013, TIGR01665, NF040883, COG4926, COG0739	NA	NA
UHGV-0141947_12	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0141947_12	UniRef90	UniRef90_A0A1L2GWH5	Phage tail protein	NA
UHGV-0141947_12	eggNOG-mapper	1158604.I591_00412	tail component	NA
UHGV-0141947_12	COG	COG4722	Phage-related protein YomH	NA
UHGV-0141947_12	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0141947_13	PHROG	phrog_1686	tail length tape measure protein	tail
UHGV-0141947_13	UniRef90	UniRef90_A0A2C9X4D2	TMP_3 domain-containing protein	NA
UHGV-0141947_13	eggNOG-mapper	1158604.I591_00411	Phage tail tape measure protein, TP901 family	NA
UHGV-0141947_13	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0141947_13	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0141947_13	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0141947_13	Structural annotation	PF20155, COG3941	NA	NA
UHGV-0141947_14	PHROG	phrog_187	head-tail adaptor	connector
UHGV-0141947_14	eggNOG-mapper	1158604.I591_00410	NA	NA
UHGV-0141947_15	PHROG	phrog_88	major tail protein	tail
UHGV-0141947_15	UniRef90	UniRef90_A0A4V3RFT0	Phage tail protein	NA
UHGV-0141947_15	eggNOG-mapper	1158604.I591_00409	Maj_tail_phi13 phage major tail , phi13 family protein	NA
UHGV-0141947_15	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0141947_15	COG	COG5492	NA	NA
UHGV-0141947_15	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0141947_16	PHROG	phrog_525	NA	unknown function
UHGV-0141947_16	eggNOG-mapper	1158604.I591_00408	NA	NA
UHGV-0141947_16	Pfam	PF20765	NA	DUF6838
UHGV-0141947_16	Structural annotation	PF20765	NA	NA
UHGV-0141947_17	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0141947_17	UniRef90	UniRef90_UPI0018832E9E	HK97 gp10 family phage protein	NA
UHGV-0141947_17	eggNOG-mapper	1158604.I591_00407	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0141947_17	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0141947_17	Structural annotation	PF17395, TIGR01725, COG5005	NA	NA
UHGV-0141947_18	PHROG	phrog_615	head-tail adaptor	connector
UHGV-0141947_18	UniRef90	UniRef90_R3I753	50S ribosomal protein L23	NA
UHGV-0141947_18	eggNOG-mapper	1158604.I591_00406	NA	NA
UHGV-0141947_18	Structural annotation	PF12206, TIGR01563, COG5614	NA	NA
UHGV-0141947_19	PHROG	phrog_132	head-tail adaptor	connector
UHGV-0141947_19	eggNOG-mapper	1158604.I591_00405	NA	NA
UHGV-0141947_20	PHROG	phrog_8832	NA	unknown function
UHGV-0141947_20	eggNOG-mapper	1158604.I591_00404	NA	NA
UHGV-0141947_21	PHROG	phrog_1328	major head protein	head and packaging
UHGV-0141947_21	UniRef90	UniRef90_UPI00065DF913	NA	NA
UHGV-0141947_21	eggNOG-mapper	1158604.I591_00403	NA	NA
UHGV-0141947_21	Pfam	PF17236	NA	DUF5309
UHGV-0141947_21	Structural annotation	PF17236, MF_04119, NF033394, COG4834	NA	NA
UHGV-0141947_22	PHROG	phrog_172	head scaffolding protein	head and packaging
UHGV-0141947_22	UniRef90	UniRef90_A0A1Y3HWY1	NA	NA
UHGV-0141947_22	eggNOG-mapper	1158604.I591_00402	NA	NA
UHGV-0141947_22	Pfam	PF14265	NA	DUF4355
UHGV-0141947_22	Structural annotation	PF14265	NA	NA
UHGV-0141947_23	PHROG	phrog_5859	NA	unknown function
UHGV-0141947_23	eggNOG-mapper	1158604.I591_00401	NA	NA
UHGV-0141947_23	Structural annotation	PF03927, MF_02200, NF009840, COG3471	NA	NA
UHGV-0141947_24	PHROG	phrog_2841	minor head protein	head and packaging
UHGV-0141947_24	UniRef90	UniRef90_A0A7U8FBT1	Minor head protein	NA
UHGV-0141947_24	eggNOG-mapper	1158604.I591_00400	cell adhesion	NA
UHGV-0141947_24	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0141947_24	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0141947_24	COG	COG2369	NA	NA
UHGV-0141947_24	Structural annotation	PF04233, TIGR01641	NA	NA
UHGV-0141947_25	PHROG	phrog_64	portal protein	head and packaging
UHGV-0141947_25	UniRef90	UniRef90_A0A511J5V4	Portal protein	NA
UHGV-0141947_25	eggNOG-mapper	1158604.I591_00399	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0141947_25	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0141947_25	Structural annotation	PF05133, MF_04120, TIGR01538, COG5518	NA	NA
UHGV-0141947_26	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0141947_26	PHROG	phrog_5902	NA	unknown function
UHGV-0141947_26	UniRef90	UniRef90_A0A511J545	Terminase_3 domain-containing protein	NA
UHGV-0141947_26	eggNOG-mapper	1158604.I591_00398	Phage terminase large subunit	NA
UHGV-0141947_26	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0141947_26	COG	COG0507	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	NA
UHGV-0141947_26	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG4373	NA	NA
UHGV-0141947_27	PHROG	phrog_1889	terminase small subunit	head and packaging
UHGV-0141947_27	UniRef90	UniRef90_A0A4S2C128	Small subunit of terminase	NA
UHGV-0141947_27	eggNOG-mapper	1158604.I591_00397	Phage terminase small subunit	NA
UHGV-0141947_27	Pfam	PF10668	Phage terminase small subunit	Phage_terminase
UHGV-0141947_27	NCBIFam	NF040601.1	phage terminase small subunit	NA
UHGV-0141947_27	COG	COG5484	NA	NA
UHGV-0141947_27	Structural annotation	PF10668, NF040601, COG5484	NA	NA
UHGV-0141947_28	PHROG	phrog_19998	NA	unknown function
UHGV-0141947_28	UniRef90	UniRef90_UPI000CF32D90	phage tail tape measure protein	NA
UHGV-0141947_28	eggNOG-mapper	1104325.M7W_1349	NA	NA
UHGV-0141947_29	PHROG	phrog_1202	NA	unknown function
UHGV-0141947_29	eggNOG-mapper	565664.EFXG_01156	NA	NA
UHGV-0141947_29	Structural annotation	PF18789	NA	NA
UHGV-0141947_30	PHROG	phrog_13806	NA	unknown function
UHGV-0141947_32	PHROG	phrog_6258	NA	unknown function
UHGV-0141947_32	eggNOG-mapper	768486.EHR_00835	BIO14.03 Phage related functions and prophages. 98 identical to Orf10 of bacteriophage Tuc2009	NA
UHGV-0141947_33	PHROG	phrog_248	transcriptional activator	transcription regulation
UHGV-0141947_33	UniRef90	UniRef90_Q47836	Putative autolysin regulatory protein ArpU	NA
UHGV-0141947_33	eggNOG-mapper	768486.EHR_09525	NA	NA
UHGV-0141947_33	NCBIFam	TIGR01637.1	ArpU family phage packaging/lysis transcriptional regulator	NA
UHGV-0141947_33	Structural annotation	PF05263, MF_00674, TIGR01637, COG1191	NA	NA
UHGV-0141947_34	PHROG	phrog_14396	NA	unknown function
UHGV-0141947_34	Structural annotation	PF10750	NA	NA
UHGV-0141947_35	PHROG	phrog_3302	NA	unknown function
UHGV-0141947_35	UniRef90	UniRef90_Q47835	ArpT	NA
UHGV-0141947_35	eggNOG-mapper	1140001.I571_02100	NA	NA
UHGV-0141947_37	eggNOG-mapper	1158606.I579_01478	NA	NA
UHGV-0141947_38	PHROG	phrog_954	DNA methyltransferase	other
UHGV-0141947_38	UniRef90	UniRef90_A0A1V8XFA7	Class I SAM-dependent methyltransferase	NA
UHGV-0141947_38	eggNOG-mapper	226185.EF_2124	methyltransferase	NA
UHGV-0141947_38	PADLOC	MTase_II_00074	Type II methyltransferase	RM
UHGV-0141947_38	Pfam	PF08241	Methyltransferase domain	Methyltransf_11
UHGV-0141947_38	COG	COG0500	SAM-dependent methyltransferase	NA
UHGV-0141947_38	Structural annotation	PF01170, MF_01057, TIGR00446, COG4123	NA	NA
UHGV-0141947_39	PHROG	phrog_98	NA	unknown function
UHGV-0141947_39	UniRef90	UniRef90_A0A8F5D9C3	YopX domain-containing protein	NA
UHGV-0141947_39	eggNOG-mapper	768486.EHR_00715	YopX protein	NA
UHGV-0141947_39	Pfam	PF09643	YopX protein	YopX
UHGV-0141947_39	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0141947_39	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0141947_40	PHROG	phrog_13888	NA	unknown function
UHGV-0141947_40	eggNOG-mapper	768486.EHR_00735	NA	NA
UHGV-0141947_40	Structural annotation	PF11011	NA	NA
UHGV-0141947_41	UniRef90	UniRef90_A0A4V3RFW4	Addiction module toxin RelE	NA
UHGV-0141947_41	eggNOG-mapper	1158604.I591_01785	NA	NA
UHGV-0141947_42	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0141947_42	UniRef90	UniRef90_A0A8F5DBK9	NA	NA
UHGV-0141947_42	eggNOG-mapper	226185.EF_2130	NA	NA
UHGV-0141947_42	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-0141947_42	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-0141947_42	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-0141947_42	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0141947_42	Structural annotation	PF14297	NA	NA
UHGV-0141947_43	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0141947_43	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0141947_43	UniRef90	UniRef90_A0A7H4KPA9	Recombination and repair protein RecT	NA
UHGV-0141947_43	eggNOG-mapper	768486.EHR_00760	RecT family	NA
UHGV-0141947_43	Pfam	PF03837	RecT family	RecT
UHGV-0141947_43	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-0141947_43	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0141947_43	Structural annotation	PF03837, TIGR00616, COG3723	NA	NA
UHGV-0141947_44	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0141947_44	UniRef90	UniRef90_A0A1L8WIB3	YqaJ domain-containing protein	NA
UHGV-0141947_44	eggNOG-mapper	768486.EHR_00765	YqaJ-like viral recombinase domain	NA
UHGV-0141947_44	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0141947_44	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-0141947_44	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0141947_44	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0141947_45	PHROG	phrog_4690	NA	unknown function
UHGV-0141947_45	eggNOG-mapper	1158604.I591_00505	NA	NA
UHGV-0141947_46	PHROG	phrog_35588	NA	unknown function
UHGV-0141947_46	eggNOG-mapper	1104325.M7W_1333	NA	NA
UHGV-0141947_47	UniRef90	UniRef90_UPI00195C4796	DNA-binding protein	NA
UHGV-0141947_47	COG	COG3311	DNA-binding transcriptional regulator AlpA	NA
UHGV-0141947_48	PHROG	phrog_1124	transcriptional regulator	transcription regulation
UHGV-0141947_48	UniRef90	UniRef90_A0A7H4KXZ9	HTH cro/C1-type domain-containing protein	NA
UHGV-0141947_48	eggNOG-mapper	1104325.M7W_1331	NA	NA
UHGV-0141947_48	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0141947_48	Structural annotation	PF01381, TIGR02607, COG1476	NA	NA
UHGV-0141947_49	UniRef90	UniRef90_A0A133N558	Helix-turn-helix transcriptional regulator	NA
UHGV-0141947_49	eggNOG-mapper	768486.EHR_09795	Helix-turn-helix domain	NA
UHGV-0141947_49	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0141947_49	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0141947_49	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0141947_50	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0141947_50	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0141947_50	UniRef90	UniRef90_I6T7S0	Prophage Lp2 protein 9	NA
UHGV-0141947_50	eggNOG-mapper	768486.EHR_09790	Helix-turn-helix XRE-family like proteins	NA
UHGV-0141947_50	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0141947_50	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0141947_50	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0141947_50	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0141947_51	PHROG	phrog_87	metallo-protease	other
UHGV-0141947_51	UniRef90	UniRef90_A0A829A1H5	Peptidase_M78 domain-containing protein	NA
UHGV-0141947_51	eggNOG-mapper	768486.EHR_09785	IrrE N-terminal-like domain	NA
UHGV-0141947_51	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0141947_51	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0141947_51	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0141947_52	KOfam	K14059	int; integrase	NA
UHGV-0141947_52	PHROG	phrog_1	integrase	integration and excision
UHGV-0141947_52	UniRef90	UniRef90_I6S2D3	Phage integrase family site specific recombinase	NA
UHGV-0141947_52	eggNOG-mapper	768486.EHR_09760	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0141947_52	Pfam	PF14657	Arm DNA-binding domain	Arm-DNA-bind_4
UHGV-0141947_52	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0141947_52	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0141947_52	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0141947_52	Structural annotation	PF00589, PF14659, PF14657, MF_01808, TIGR02224, COG4974	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0141947	Yes	35,408 bps	33.88%	91.63%	0.9722
UHGV-0194794	No	24,349 bps	33.66%	62.76%	0.9781
UHGV-1644836	No	16,237 bps	33.44%	41.86%	0.9762
UHGV-0172211	No	15,107 bps	33.73%	38.75%	0.9756