vOTU-067856

Overview

vOTU representative UHGV-2008461

No. of genomes 9

Genome length 57,065 bps

Completeness 99.05% (high-quality)

Host Faecalibacterium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-067856
Number of genomes	9
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00007 › vGENUS-00066 › vSUBGEN-03357 › vOTU-067856
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2008461
BioSample	NA
Genome length	57,065 bps
CheckV completeness	99.05% (high-quality)
CheckV contamination	0.00%
CDS count	99
CDS density	84.74%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2008461_1	KOfam	K07273	acm; lysozyme	NA
UHGV-2008461_1	PHROG	phrog_291	endolysin	lysis
UHGV-2008461_1	UniRef90	UniRef90_A0A564U0D3	Autolytic lysozyme	NA
UHGV-2008461_1	eggNOG-mapper	718252.FP2_04890	hydrolase, family 25	NA
UHGV-2008461_1	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-2008461_1	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-2008461_1	Structural annotation	PF01183, NF003812, COG3757	NA	NA
UHGV-2008461_3	PHROG	phrog_15303	NA	unknown function
UHGV-2008461_3	Pfam	PF09682	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
UHGV-2008461_4	KOfam	K24213	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	NA
UHGV-2008461_4	PHROG	phrog_819	tail protein	tail
UHGV-2008461_4	eggNOG-mapper	411483.FAEPRAA2165_00757	NA	NA
UHGV-2008461_4	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-2008461_6	Structural annotation	PF07870, MF_01506	NA	NA
UHGV-2008461_12	PHROG	phrog_16490	NA	unknown function
UHGV-2008461_12	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-2008461_13	eggNOG-mapper	658655.HMPREF0988_00916	NA	NA
UHGV-2008461_14	eggNOG-mapper	1378168.N510_03079	NA	NA
UHGV-2008461_16	Structural annotation	PF07878	NA	NA
UHGV-2008461_17	Pfam	PF04448	NA	DUF551
UHGV-2008461_18	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-2008461_18	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-2008461_18	UniRef90	UniRef90_A0A1C6BS15	Sporulation initiation inhibitor protein soj	NA
UHGV-2008461_18	eggNOG-mapper	1408423.JHYA01000021_gene392	Cellulose biosynthesis protein BcsQ	NA
UHGV-2008461_18	Pfam	PF13614	AAA domain	AAA_31
UHGV-2008461_18	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-2008461_18	Structural annotation	PF13614, MF_00533, NF010443, COG1192	NA	NA
UHGV-2008461_20	PHROG	phrog_4402	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2008461_20	UniRef90	UniRef90_A0A0H5Q331	Rep_3 domain-containing protein	NA
UHGV-2008461_20	eggNOG-mapper	999413.HMPREF1094_04438	Initiator Replication protein	NA
UHGV-2008461_20	Pfam	PF01051	Initiator Replication protein, WH1	Rep3_N
UHGV-2008461_20	Pfam	PF21205	Initiator Rep protein, WH2	Rep3_C
UHGV-2008461_20	COG	COG5527	Protein involved in initiation of plasmid replication	NA
UHGV-2008461_20	Structural annotation	PF01051, PF21205, NF038290, COG5527	NA	NA
UHGV-2008461_21	UniRef90	UniRef90_A0A2A7B6N3	HTH cro/C1-type domain-containing protein	NA
UHGV-2008461_21	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2008461_21	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2008461_21	Structural annotation	PF13560, MF_00535, NF041951, COG1476	NA	NA
UHGV-2008461_24	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2008461_24	UniRef90	UniRef90_A0A373XY93	XRE family transcriptional regulator	NA
UHGV-2008461_24	eggNOG-mapper	665956.HMPREF1032_02614	Cro/C1-type HTH DNA-binding domain	NA
UHGV-2008461_24	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-2008461_24	Structural annotation	PF12844, MF_00535, NF041951, COG3655	NA	NA
UHGV-2008461_25	UniRef90	UniRef90_A0A7X1LWA7	XRE family transcriptional regulator	NA
UHGV-2008461_25	eggNOG-mapper	428125.CLOLEP_02737	NA	NA
UHGV-2008461_25	Structural annotation	TIGR03070	NA	NA
UHGV-2008461_26	Structural annotation	PF10922	NA	NA
UHGV-2008461_28	Structural annotation	TIGR03826	NA	NA
UHGV-2008461_30	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-2008461_30	Structural annotation	PF13443, TIGR02684, COG1476	NA	NA
UHGV-2008461_31	Structural annotation	PF14143	NA	NA
UHGV-2008461_32	KOfam	K07738	nrdR; transcriptional repressor NrdR	NA
UHGV-2008461_32	UniRef90	UniRef90_X1J2I6	ATP-cone domain-containing protein (Fragment)	NA
UHGV-2008461_32	eggNOG-mapper	1165096.ARWF01000001_gene689	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes	NA
UHGV-2008461_32	Pfam	PF01096	Transcription factor S-II (TFIIS)	TFIIS_C
UHGV-2008461_32	COG	COG1327	Transcriptional regulator NrdR, contains Zn-ribbon and ATP-cone domains	NA
UHGV-2008461_32	Structural annotation	PF04606, NF007241	NA	NA
UHGV-2008461_34	Pfam	PF13451	Probable zinc-ribbon domain	zf-trcl
UHGV-2008461_34	Structural annotation	PF13451	NA	NA
UHGV-2008461_35	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-2008461_35	UniRef90	UniRef90_E2ZNS9	Erf family protein	NA
UHGV-2008461_35	eggNOG-mapper	748224.HMPREF9436_03360	ERF superfamily	NA
UHGV-2008461_35	Pfam	PF04404	ERF superfamily	ERF
UHGV-2008461_35	Structural annotation	PF04404, COG4712	NA	NA
UHGV-2008461_36	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-2008461_36	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2008461_36	UniRef90	UniRef90_A0A6N7TNV3	Single-stranded DNA-binding protein	NA
UHGV-2008461_36	eggNOG-mapper	748224.HMPREF9436_03359	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-2008461_36	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-2008461_36	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-2008461_36	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-2008461_36	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-2008461_36	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-2008461_37	PHROG	phrog_35094	NA	unknown function
UHGV-2008461_37	eggNOG-mapper	457424.BFAG_02409	NA	NA
UHGV-2008461_39	PHROG	phrog_843	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-2008461_39	UniRef90	UniRef90_UPI000C78AB6D	Holliday junction resolvase RecU	NA
UHGV-2008461_39	eggNOG-mapper	929506.CbC4_1203	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	NA
UHGV-2008461_39	Structural annotation	PF03838, MF_00130, NF002581, COG3331	NA	NA
UHGV-2008461_40	PHROG	phrog_30930	NA	unknown function
UHGV-2008461_40	eggNOG-mapper	1214184.ALKY01000039_gene933	NA	NA
UHGV-2008461_40	Structural annotation	PF05037	NA	NA
UHGV-2008461_42	Structural annotation	PF11998, COG5420	NA	NA
UHGV-2008461_44	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-2008461_44	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-2008461_44	UniRef90	UniRef90_A0A1Y4LU27	Adenylyl-sulfate reductase	NA
UHGV-2008461_44	eggNOG-mapper	1408437.JNJN01000032_gene2312	Phosphoadenosine phosphosulfate reductase	NA
UHGV-2008461_44	PADLOC	BrxP_00001	BrxP	BREX
UHGV-2008461_44	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-2008461_44	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-2008461_44	Structural annotation	PF01507, MF_00063, NF010369, COG0175	NA	NA
UHGV-2008461_45	Structural annotation	PF09723	NA	NA
UHGV-2008461_48	Structural annotation	PF16677	NA	NA
UHGV-2008461_49	Pfam	PF18912	Double zinc ribbon domain	DZR_2
UHGV-2008461_50	UniRef90	UniRef90_UPI0012DD33A2	restriction endonuclease subunit M	NA
UHGV-2008461_50	eggNOG-mapper	596329.HMPREF0631_0252	restriction endonuclease	NA
UHGV-2008461_50	PADLOC	MTase_II_00176	Type II methyltransferase	RM
UHGV-2008461_50	COG	COG1002	Type II restriction/modification system, endonuclease and methylase domains	NA
UHGV-2008461_56	UniRef90	UniRef90_A0A413HUB9	NA	NA
UHGV-2008461_59	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-2008461_59	Structural annotation	PF14354, TIGR03655, COG3478	NA	NA
UHGV-2008461_60	PHROG	phrog_15768	NA	unknown function
UHGV-2008461_60	UniRef90	UniRef90_A0A6N7WKT0	NA	NA
UHGV-2008461_60	eggNOG-mapper	748224.HMPREF9436_03357	NA	NA
UHGV-2008461_60	Pfam	PF19808	NA	DUF6291
UHGV-2008461_60	Structural annotation	PF19808	NA	NA
UHGV-2008461_61	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-2008461_61	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-2008461_61	UniRef90	UniRef90_UPI001CBC4B63	AAA family ATPase	NA
UHGV-2008461_61	eggNOG-mapper	1203606.HMPREF1526_01325	Participates in initiation and elongation during chromosome replication	NA
UHGV-2008461_61	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-2008461_61	COG	COG0305	Replicative DNA helicase	NA
UHGV-2008461_61	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-2008461_62	PHROG	phrog_419	NA	unknown function
UHGV-2008461_62	UniRef90	UniRef90_A6MAI4	Gp119	NA
UHGV-2008461_62	eggNOG-mapper	768486.EHR_02665	NA	NA
UHGV-2008461_62	Structural annotation	PF14083	NA	NA
UHGV-2008461_63	PHROG	phrog_1709	NA	unknown function
UHGV-2008461_63	eggNOG-mapper	500632.CLONEX_01053	NA	NA
UHGV-2008461_64	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-2008461_64	eggNOG-mapper	742738.HMPREF9460_00717	YqaJ viral recombinase family	NA
UHGV-2008461_64	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-2008461_68	PHROG	phrog_14275	NA	unknown function
UHGV-2008461_68	eggNOG-mapper	1280676.AUJO01000001_gene2313	NA	NA
UHGV-2008461_68	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-2008461_68	Structural annotation	PF03843, MF_00984, TIGR00752, COG3065	NA	NA
UHGV-2008461_69	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-2008461_69	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-2008461_69	UniRef90	UniRef90_A0A1Y4EUA0	Bro-N domain-containing protein	NA
UHGV-2008461_69	eggNOG-mapper	1289596.M1PKL6_9CAUD	BRO family, N-terminal domain	NA
UHGV-2008461_69	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-2008461_69	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-2008461_69	Structural annotation	PF02498, PF03374, TIGR02681, COG3645, COG3561	NA	NA
UHGV-2008461_70	Structural annotation	PF19807, NF041793, COG4877	NA	NA
UHGV-2008461_72	UniRef90	UniRef90_UPI001C02D1DF	winged helix-turn-helix transcriptional regulator	NA
UHGV-2008461_72	Structural annotation	PF20075, TIGR02612, COG1396	NA	NA
UHGV-2008461_73	KOfam	K14060	pinR; putative DNA-invertase from lambdoid prophage Rac	NA
UHGV-2008461_73	PHROG	phrog_125	DNA invertase	DNA, RNA and nucleotide metabolism
UHGV-2008461_73	UniRef90	UniRef90_UPI001A9B5A42	recombinase family protein	NA
UHGV-2008461_73	eggNOG-mapper	1443122.Z958_05795	Resolvase, N terminal domain	NA
UHGV-2008461_73	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-2008461_73	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-2008461_73	Structural annotation	PF00239, PF02796, NF009949, COG1961	NA	NA
UHGV-2008461_75	Structural annotation	NF009949	NA	NA
UHGV-2008461_77	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-2008461_77	UniRef90	UniRef90_UPI000419A6BC	phage terminase large subunit	NA
UHGV-2008461_77	eggNOG-mapper	1121866.AUGK01000003_gene1428	chromosome segregation	NA
UHGV-2008461_77	COG	COG5410	NA	NA
UHGV-2008461_77	Structural annotation	PF17289, PF02562, MF_04147, NF033889, COG5362, COG5410	NA	NA
UHGV-2008461_79	PHROG	phrog_64	portal protein	head and packaging
UHGV-2008461_79	UniRef90	UniRef90_A0A371ILT4	Phage portal protein	NA
UHGV-2008461_79	eggNOG-mapper	1121866.AUGK01000003_gene1429	Phage portal protein, SPP1 Gp6-like	NA
UHGV-2008461_79	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-2008461_79	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-2008461_83	PHROG	phrog_29	major head protein	head and packaging
UHGV-2008461_83	UniRef90	UniRef90_A0A2Z4QBB4	Major capsid protein E	NA
UHGV-2008461_83	eggNOG-mapper	1347368.HG964404_gene4993	Phage major capsid protein E	NA
UHGV-2008461_83	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-2008461_83	Structural annotation	PF03864, MF_04133, NF041162, COG4653	NA	NA
UHGV-2008461_84	UniRef90	UniRef90_R6N215	Phage QLRG family putative DNA packaging	NA
UHGV-2008461_84	Structural annotation	TIGR01560	NA	NA
UHGV-2008461_85	eggNOG-mapper	1298920.KI911353_gene2656	NA	NA
UHGV-2008461_85	Structural annotation	PF19586, TIGR01563, COG5614	NA	NA
UHGV-2008461_87	Structural annotation	PF06141, TIGR02367, COG3167	NA	NA
UHGV-2008461_88	PHROG	phrog_158	major tail protein	tail
UHGV-2008461_88	UniRef90	UniRef90_UPI001D087591	phage tail protein	NA
UHGV-2008461_88	eggNOG-mapper	1449343.JQLQ01000002_gene1514	Phage tail tube protein, TTP	NA
UHGV-2008461_88	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-2008461_89	UniRef90	UniRef90_A0A847YX95	NA	NA
UHGV-2008461_89	eggNOG-mapper	1123263.AUKY01000015_gene1618	NA	NA
UHGV-2008461_89	Pfam	PF16478	NA	DUF5055
UHGV-2008461_89	Structural annotation	PF16478	NA	NA
UHGV-2008461_90	eggNOG-mapper	1121333.JMLH01000047_gene1011	NA	NA
UHGV-2008461_91	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-2008461_91	eggNOG-mapper	1121866.AUGK01000003_gene1437	phage tail tape measure protein	NA
UHGV-2008461_91	COG	COG1280	Threonine/homoserine/homoserine lactone efflux protein	NA
UHGV-2008461_92	PHROG	phrog_1194	NA	unknown function
UHGV-2008461_92	eggNOG-mapper	665956.HMPREF1032_03629	NA	NA
UHGV-2008461_92	Pfam	PF20458	NA	DUF6711
UHGV-2008461_92	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-2008461_93	PHROG	phrog_13879	NA	unknown function
UHGV-2008461_93	eggNOG-mapper	1122919.KB905559_gene1344	NA	NA
UHGV-2008461_93	Pfam	PF19789	NA	DUF6273
UHGV-2008461_93	Structural annotation	PF14594, PF19789, PF03256, PF09134, NF033848, COG3500, COG5156	NA	NA
UHGV-2008461_94	PHROG	phrog_18725	NA	unknown function
UHGV-2008461_94	eggNOG-mapper	1226322.HMPREF1545_00062	NA	NA
UHGV-2008461_95	PHROG	phrog_9534	head protein	head and packaging
UHGV-2008461_95	eggNOG-mapper	748224.HMPREF9436_01407	COG NOG18825 non supervised orthologous group	NA
UHGV-2008461_96	eggNOG-mapper	748224.HMPREF9436_00405	domain, Protein	NA
UHGV-2008461_96	COG	COG5492	NA	NA
UHGV-2008461_98	PHROG	phrog_1382	NA	unknown function
UHGV-2008461_98	eggNOG-mapper	33035.JPJF01000043_gene998	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2008461	Yes	57,065 bps	48.34%	99.05%	0.9813
UHGV-1378432	No	56,421 bps	48.26%	97.93%	0.9813
UHGV-0181148	No	56,381 bps	48.25%	97.86%	0.9812
UHGV-0365975	No	56,162 bps	48.24%	97.48%	0.9816
UHGV-0068049	No	55,877 bps	48.22%	96.98%	0.9814
UHGV-1489995	No	55,808 bps	48.20%	96.86%	0.9814
UHGV-0060303	No	12,203 bps	48.54%	21.18%	0.9798
UHGV-1815816	No	12,203 bps	48.54%	21.18%	0.9798
UHGV-1815826	No	12,203 bps	48.56%	21.18%	0.9798