vOTU-068626

Overview

vOTU representative UHGV-2047565

No. of genomes 3

Genome length 44,515 bps

Completeness 99.76% (high-quality)

Host Phascolarctobacterium faecium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-068626
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00008 › vSUBFAM-00238 › vGENUS-00206 › vSUBGEN-01873 › vOTU-068626
Host taxonomy	Bacteria › Firmicutes C › Negativicutes › Acidaminococcales › Acidaminococcaceae › Phascolarctobacterium › Phascolarctobacterium faecium
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2047565
BioSample	SAMEA2737706
Genome length	44,515 bps
CheckV completeness	99.76% (high-quality)
CheckV contamination	0.00%
CDS count	68
CDS density	89.50%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2047565_4	UniRef90	UniRef90_A0A412X6I8	Zinc ribbon domain-containing protein	NA
UHGV-2047565_4	Pfam	PF12773	Double zinc ribbon	DZR
UHGV-2047565_6	Structural annotation	PF18337	NA	NA
UHGV-2047565_7	eggNOG-mapper	401526.TcarDRAFT_1279	phage transcriptional regulator, RinA family	NA
UHGV-2047565_7	Structural annotation	PF05263, MF_00245, TIGR01636, COG2739	NA	NA
UHGV-2047565_10	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-2047565_10	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-2047565_10	UniRef90	UniRef90_A0A6A8SGD1	Terminase small subunit	NA
UHGV-2047565_10	eggNOG-mapper	585503.HMPREF7545_1730	Terminase small subunit	NA
UHGV-2047565_10	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-2047565_10	COG	COG3728	Phage terminase, small subunit	NA
UHGV-2047565_10	Structural annotation	PF03592, COG3728	NA	NA
UHGV-2047565_11	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-2047565_11	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-2047565_11	UniRef90	UniRef90_UPI001D00EC11	terminase family protein	NA
UHGV-2047565_11	eggNOG-mapper	585503.HMPREF7545_1731	Terminase-like family	NA
UHGV-2047565_11	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-2047565_11	COG	COG5323	Phage large terminase packaging protein	NA
UHGV-2047565_11	Structural annotation	PF03237, PF17289, MF_04146, TIGR01547, COG4373	NA	NA
UHGV-2047565_13	PHROG	phrog_332	head-tail adaptor	connector
UHGV-2047565_13	UniRef90	UniRef90_UPI001F3F9DD9	portal protein	NA
UHGV-2047565_13	eggNOG-mapper	568816.Acin_1834	Bacteriophage head to tail connecting protein	NA
UHGV-2047565_13	Pfam	PF12236	Bacteriophage head to tail connecting protein	Head-tail_con
UHGV-2047565_13	Structural annotation	PF12236, MF_04120, TIGR01538, COG4695	NA	NA
UHGV-2047565_14	PHROG	phrog_528	NA	unknown function
UHGV-2047565_14	UniRef90	UniRef90_A0A2D6RTY3	Endopeptidase	NA
UHGV-2047565_14	eggNOG-mapper	1401067.HMPREF0872_06805	NA	NA
UHGV-2047565_15	PHROG	phrog_458	protease	other
UHGV-2047565_15	UniRef90	UniRef90_A0A679KEK7	NA	NA
UHGV-2047565_15	eggNOG-mapper	699218.HMPREF0889_0285	NA	NA
UHGV-2047565_16	PHROG	phrog_212	major head protein	head and packaging
UHGV-2047565_16	UniRef90	UniRef90_A0A0M3F638	NA	NA
UHGV-2047565_16	eggNOG-mapper	699218.HMPREF0889_0284	NA	NA
UHGV-2047565_16	Pfam	PF20911	Major capsid protein GP7	GP7
UHGV-2047565_16	Structural annotation	PF20911, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2047565_17	Structural annotation	PF21190	NA	NA
UHGV-2047565_18	Structural annotation	PF12949	NA	NA
UHGV-2047565_19	PHROG	phrog_394	tail protein	tail
UHGV-2047565_19	UniRef90	UniRef90_A0A8B2QU77	Tail tube protein	NA
UHGV-2047565_19	eggNOG-mapper	1401067.HMPREF0872_06780	NA	NA
UHGV-2047565_20	PHROG	phrog_376	tail protein	tail
UHGV-2047565_20	UniRef90	UniRef90_A0A0U1KV93	NA	NA
UHGV-2047565_20	eggNOG-mapper	568816.Acin_1828	NA	NA
UHGV-2047565_20	Pfam	PF21722	Glycine-rich domain	Gly_rich_2
UHGV-2047565_20	Structural annotation	PF11134, MF_00923, TIGR03300, COG2706	NA	NA
UHGV-2047565_21	PHROG	phrog_308	internal virion protein	head and packaging
UHGV-2047565_21	UniRef90	UniRef90_A0A7X2XHB5	NA	NA
UHGV-2047565_21	eggNOG-mapper	202954.BBNK01000010_gene1461	NA	NA
UHGV-2047565_21	Pfam	PF11090	Bacteriophage T7, probable scaffold protein Gp13	Phage_T7_Gp13
UHGV-2047565_21	Structural annotation	PF13420, MF_02210, NF011709, COG1247	NA	NA
UHGV-2047565_22	PHROG	phrog_418	internal virion protein	head and packaging
UHGV-2047565_22	eggNOG-mapper	568816.Acin_1826	NA	NA
UHGV-2047565_22	Structural annotation	PF05384, TIGR01010, COG3524	NA	NA
UHGV-2047565_23	KOfam	K08640	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	NA
UHGV-2047565_23	PHROG	phrog_1044	endolysin	lysis
UHGV-2047565_23	UniRef90	UniRef90_UPI001032FD1D	D-Ala-D-Ala carboxypeptidase family metallohydrolase	NA
UHGV-2047565_23	Pfam	PF08291	Peptidase M15	Peptidase_M15_3
UHGV-2047565_24	PHROG	phrog_9854	NA	unknown function
UHGV-2047565_24	UniRef90	UniRef90_A0A259UTX8	LPD38 domain-containing protein	NA
UHGV-2047565_24	eggNOG-mapper	401526.TcarDRAFT_1293	protein secretion by the type IV secretion system	NA
UHGV-2047565_24	Pfam	PF18819	Phage MuF-C-terminal domain	MuF_C
UHGV-2047565_24	Pfam	PF18857	Large polyvalent protein associated domain 38	LPD38
UHGV-2047565_24	COG	COG0503	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	NA
UHGV-2047565_25	PHROG	phrog_373	anti-repressor	transcription regulation
UHGV-2047565_25	UniRef90	UniRef90_A0A8B2QM02	Rha family phage regulatory protein	NA
UHGV-2047565_25	eggNOG-mapper	1497679.EP56_03825	Phage regulatory protein Rha (Phage_pRha)	NA
UHGV-2047565_25	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-2047565_25	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-2047565_25	COG	COG3645	Phage antirepressor protein YoqD, KilAC domain	NA
UHGV-2047565_25	Structural annotation	PF02498, PF10543, TIGR02681, COG3617	NA	NA
UHGV-2047565_26	UniRef90	UniRef90_A8MHZ5	RHH_1 domain-containing protein	NA
UHGV-2047565_26	eggNOG-mapper	350688.Clos_1887	NA	NA
UHGV-2047565_26	Structural annotation	PF01402, NF041793, COG4710	NA	NA
UHGV-2047565_30	PHROG	phrog_9659	NA	unknown function
UHGV-2047565_31	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-2047565_31	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-2047565_31	UniRef90	UniRef90_A0A8B2QP69	Phage antirepressor YoqD-like protein	NA
UHGV-2047565_31	eggNOG-mapper	1122129.AUEF01000019_gene2272	Phage regulatory protein Rha (Phage_pRha)	NA
UHGV-2047565_31	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-2047565_31	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-2047565_31	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-2047565_31	COG	COG3645	Phage antirepressor protein YoqD, KilAC domain	NA
UHGV-2047565_31	Structural annotation	PF09669, PF03374, TIGR02681, COG3646	NA	NA
UHGV-2047565_32	PHROG	phrog_1640	tail protein	tail
UHGV-2047565_32	eggNOG-mapper	1072685.IX83_07040	NA	NA
UHGV-2047565_33	PHROG	phrog_13589	NA	unknown function
UHGV-2047565_33	eggNOG-mapper	632245.CLP_1288	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-2047565_33	Pfam	PF11133	Head fiber protein	Phage_head_fibr
UHGV-2047565_33	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-2047565_34	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-2047565_35	PHROG	phrog_1348	tail fiber protein	tail
UHGV-2047565_35	UniRef90	UniRef90_C1DBJ8	NA	NA
UHGV-2047565_35	Structural annotation	PF14301	NA	NA
UHGV-2047565_36	PHROG	phrog_1009	NA	unknown function
UHGV-2047565_37	eggNOG-mapper	568816.Acin_1216	NA	NA
UHGV-2047565_38	PHROG	phrog_5867	endolysin	lysis
UHGV-2047565_38	UniRef90	UniRef90_A0A7X2XH64	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2047565_38	eggNOG-mapper	1262914.BN533_02021	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2047565_38	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-2047565_38	COG	COG3409	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	NA
UHGV-2047565_38	Structural annotation	MF_04111	NA	NA
UHGV-2047565_41	UniRef90	UniRef90_A0A412X6W3	Sigma70_r4_2 domain-containing protein	NA
UHGV-2047565_41	Pfam	PF08281	Sigma-70, region 4	Sigma70_r4_2
UHGV-2047565_41	COG	COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	NA
UHGV-2047565_41	Structural annotation	PF08281, MF_00245, NF001075, COG2739	NA	NA
UHGV-2047565_44	PHROG	phrog_16490	NA	unknown function
UHGV-2047565_44	eggNOG-mapper	476272.RUMHYD_01954	NA	NA
UHGV-2047565_45	eggNOG-mapper	397290.C810_01330	NA	NA
UHGV-2047565_46	UniRef90	UniRef90_A0A7M1RS47	RNA polymerase sigma factor/ubiquitin-like protein	NA
UHGV-2047565_46	eggNOG-mapper	1378168.N510_03079	NA	NA
UHGV-2047565_47	KOfam	K14059	int; integrase	NA
UHGV-2047565_47	PHROG	phrog_1	integrase	integration and excision
UHGV-2047565_47	UniRef90	UniRef90_UPI000B1B52E6	tyrosine-type recombinase/integrase	NA
UHGV-2047565_47	eggNOG-mapper	1111454.HMPREF1250_0778	Belongs to the 'phage' integrase family	NA
UHGV-2047565_47	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2047565_47	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2047565_47	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-2047565_48	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-2047565_48	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-2047565_48	UniRef90	UniRef90_UPI000987C3DA	XRE family transcriptional regulator	NA
UHGV-2047565_48	eggNOG-mapper	1111134.HMPREF1253_1209	Peptidase S24-like	NA
UHGV-2047565_48	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-2047565_48	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-2047565_48	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-2047565_48	Structural annotation	PF00717, PF01381, MF_00015, TIGR00498, COG2932	NA	NA
UHGV-2047565_49	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-2047565_49	UniRef90	UniRef90_E0NXN1	DNA-binding helix-turn-helix protein	NA
UHGV-2047565_49	eggNOG-mapper	864563.HMPREF9166_0598	DNA-binding helix-turn-helix protein	NA
UHGV-2047565_49	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2047565_49	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2047565_49	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-2047565_50	PHROG	phrog_6058	NA	unknown function
UHGV-2047565_50	UniRef90	UniRef90_A0A101WT85	Modification methylase SinI	NA
UHGV-2047565_50	eggNOG-mapper	1238184.CM001792_gene70	NA	NA
UHGV-2047565_54	PHROG	phrog_3292	NA	unknown function
UHGV-2047565_54	UniRef90	UniRef90_A0A412X6L4	KTSC domain-containing protein	NA
UHGV-2047565_54	eggNOG-mapper	679201.HMPREF9334_01266	KTSC domain	NA
UHGV-2047565_54	Pfam	PF13619	KTSC domain	KTSC
UHGV-2047565_54	Structural annotation	PF13619	NA	NA
UHGV-2047565_55	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-2047565_55	UniRef90	UniRef90_A0A412X6A8	XRE family transcriptional regulator	NA
UHGV-2047565_55	eggNOG-mapper	936375.HMPREF1152_0655	Cro/C1-type HTH DNA-binding domain	NA
UHGV-2047565_55	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2047565_55	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-2047565_57	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-2047565_57	UniRef90	UniRef90_UPI001C3A3B51	Siphovirus Gp157 family protein	NA
UHGV-2047565_57	eggNOG-mapper	699218.HMPREF0889_0310	Siphovirus Gp157	NA
UHGV-2047565_57	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-2047565_57	Structural annotation	PF05565, NF002139	NA	NA
UHGV-2047565_58	PHROG	phrog_7792	NA	unknown function
UHGV-2047565_58	UniRef90	UniRef90_UPI001D07B780	RAD52 family DNA repair protein	NA
UHGV-2047565_58	eggNOG-mapper	1485543.JMME01000021_gene803	NA	NA
UHGV-2047565_58	Structural annotation	PF04098, TIGR00607, COG4380	NA	NA
UHGV-2047565_59	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-2047565_59	eggNOG-mapper	1304866.K413DRAFT_1197	NA	NA
UHGV-2047565_59	Structural annotation	PF05772, NF007281	NA	NA
UHGV-2047565_60	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2047565_60	UniRef90	UniRef90_UPI0015D10FB3	helix-turn-helix domain-containing protein	NA
UHGV-2047565_60	eggNOG-mapper	1449126.JQKL01000003_gene1705	ROK family	NA
UHGV-2047565_60	COG	COG3355	Predicted transcriptional regulator	NA
UHGV-2047565_60	Structural annotation	PF01978, MF_01819, TIGR01610, COG3355	NA	NA
UHGV-2047565_62	KOfam	K21919	KCTD9; BTB/POZ domain-containing protein KCTD9	NA
UHGV-2047565_62	PHROG	phrog_923	NA	unknown function
UHGV-2047565_62	UniRef90	UniRef90_A0A412X6I1	Pentapeptide repeat-containing protein	NA
UHGV-2047565_62	Pfam	PF00805	Pentapeptide repeats (8 copies)	Pentapeptide
UHGV-2047565_62	Structural annotation	PF13599, NF011744	NA	NA
UHGV-2047565_63	Structural annotation	NF011854	NA	NA
UHGV-2047565_64	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-2047565_64	PHROG	phrog_67	DNA methyltransferase	other
UHGV-2047565_64	UniRef90	UniRef90_A0A412X698	Methyltransferase	NA
UHGV-2047565_64	eggNOG-mapper	749222.Nitsa_1817	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-2047565_64	PADLOC	MTase_II_00157	Type II methyltransferase	RM
UHGV-2047565_64	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-2047565_64	COG	COG0863	DNA modification methylase	NA
UHGV-2047565_64	Structural annotation	PF01555, MF_01872, NF010253, COG0863	NA	NA
UHGV-2047565_65	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-2047565_65	UniRef90	UniRef90_UPI000F0C6FA4	NA	NA
UHGV-2047565_65	eggNOG-mapper	1347392.CCEZ01000043_gene417	NA	NA
UHGV-2047565_65	Pfam	PF06356	NA	DUF1064
UHGV-2047565_65	Structural annotation	PF06356, NF033179	NA	NA
UHGV-2047565_66	PHROG	phrog_2776	NA	unknown function
UHGV-2047565_66	UniRef90	UniRef90_A0A2S7ZCT0	DNA repair protein MmcB-related protein	NA
UHGV-2047565_66	Pfam	PF06319	DNA repair protein MmcB-like	MmcB-like
UHGV-2047565_66	COG	COG5321	NA	NA
UHGV-2047565_66	Structural annotation	PF06319, NF033832, COG5321	NA	NA
UHGV-2047565_67	PHROG	phrog_13489	NA	unknown function
UHGV-2047565_67	eggNOG-mapper	1158601.I585_01174	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2047565	Yes	44,515 bps	38.89%	99.76%	0.9704
UHGV-1462596	No	33,941 bps	39.06%	76.11%	0.9739
UHGV-1540616	No	31,245 bps	38.66%	70.09%	0.9701