vOTU-068677

Overview

vOTU representative UHGV-1381973

No. of genomes 5

Genome length 35,997 bps

Completeness 99.90% (high-quality)

Host Ruminococcus E

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-068677
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-00027 › vGENUS-02446 › vSUBGEN-04505 › vOTU-068677
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › Ruminococcus E
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1381973
BioSample	SAMEA2155255
Genome length	35,997 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	54
CDS density	87.25%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1381973_3	UniRef90	UniRef90_UPI001B3C704F	helix-turn-helix domain-containing protein	NA
UHGV-1381973_3	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-1381973_4	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1381973_4	PHROG	phrog_20388	endolysin	lysis
UHGV-1381973_4	UniRef90	UniRef90_A0A374N1L8	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1381973_4	eggNOG-mapper	1203606.HMPREF1526_00253	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1381973_4	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-1381973_4	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-1381973_4	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1381973_4	Structural annotation	PF01510, PF01476, PF15591, MF_02014, MF_04111, MF_01354, NF008758, NF010723, TIGR00405, COG3023, COG5004, COG2139	NA	NA
UHGV-1381973_5	PHROG	phrog_199	holin	lysis
UHGV-1381973_5	UniRef90	UniRef90_A0A2N0ULW7	Holin	NA
UHGV-1381973_5	eggNOG-mapper	1160721.RBI_I01565	Bacteriophage holin family	NA
UHGV-1381973_5	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1381973_5	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1381973_5	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-1381973_5	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1381973_7	UniRef90	UniRef90_A0A1C6HHE5	BppU_N domain-containing protein	NA
UHGV-1381973_7	Structural annotation	PF01664	NA	NA
UHGV-1381973_8	Structural annotation	PF14594, NF033848, COG3500	NA	NA
UHGV-1381973_9	PHROG	phrog_1194	NA	unknown function
UHGV-1381973_9	UniRef90	UniRef90_A0A8D9PDT1	YolD-like protein	NA
UHGV-1381973_9	eggNOG-mapper	1304866.K413DRAFT_3047	NA	NA
UHGV-1381973_9	Pfam	PF20458	NA	DUF6711
UHGV-1381973_9	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-1381973_10	PHROG	phrog_58	tail length tape measure protein	tail
UHGV-1381973_10	UniRef90	UniRef90_A0A2N0UYY1	Phage-related protein	NA
UHGV-1381973_10	eggNOG-mapper	1160721.RBI_II00528	Phage tail tape measure protein, TP901 family	NA
UHGV-1381973_10	COG	COG1006	Multisubunit Na+/H+ antiporter, MnhC subunit	NA
UHGV-1381973_10	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-1381973_11	PHROG	phrog_5319	outer membrane protein	other
UHGV-1381973_11	UniRef90	UniRef90_A0A1Q6JN93	zinc_ribbon_2 domain-containing protein	NA
UHGV-1381973_11	eggNOG-mapper	1042156.CXIVA_15870	sh3 domain protein	NA
UHGV-1381973_11	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-1381973_11	COG	COG3103	NA	NA
UHGV-1381973_11	Structural annotation	PF03843, PF12773, MF_00984, TIGR00752, COG3065	NA	NA
UHGV-1381973_12	PHROG	phrog_8355	NA	unknown function
UHGV-1381973_12	UniRef90	UniRef90_UPI001C0B4BD8	Gp15 family bacteriophage protein	NA
UHGV-1381973_12	eggNOG-mapper	1262449.CP6013_3207	NA	NA
UHGV-1381973_13	PHROG	phrog_8300	NA	unknown function
UHGV-1381973_13	eggNOG-mapper	483218.BACPEC_01148	NA	NA
UHGV-1381973_13	Structural annotation	PF06854	NA	NA
UHGV-1381973_14	PHROG	phrog_820	major tail protein	tail
UHGV-1381973_14	eggNOG-mapper	1282664.H354_06691	NA	NA
UHGV-1381973_14	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1381973_15	PHROG	phrog_2595	head-tail connector protein	connector
UHGV-1381973_15	UniRef90	UniRef90_UPI001D0627B3	minor capsid protein	NA
UHGV-1381973_15	eggNOG-mapper	1123263.AUKY01000051_gene1075	NA	NA
UHGV-1381973_15	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-1381973_15	Structural annotation	PF12691, COG5003	NA	NA
UHGV-1381973_16	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1381973_16	eggNOG-mapper	483218.BACPEC_01151	NA	NA
UHGV-1381973_17	PHROG	phrog_8710	NA	unknown function
UHGV-1381973_17	eggNOG-mapper	33035.JPJF01000093_gene2249	NA	NA
UHGV-1381973_17	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-1381973_18	eggNOG-mapper	483218.BACPEC_01153	NA	NA
UHGV-1381973_19	PHROG	phrog_422	major head protein	head and packaging
UHGV-1381973_19	UniRef90	UniRef90_UPI001C03381A	phage capsid protein	NA
UHGV-1381973_19	eggNOG-mapper	445972.ANACOL_01845	NA	NA
UHGV-1381973_19	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1381973_20	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-1381973_20	eggNOG-mapper	1304866.K413DRAFT_0806	NA	NA
UHGV-1381973_21	PHROG	phrog_2616	NA	unknown function
UHGV-1381973_21	Structural annotation	PF01281	NA	NA
UHGV-1381973_23	KOfam	K11044	spyA; C3 family ADP-ribosyltransferase [EC:2.4.2.-]	NA
UHGV-1381973_23	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1381973_23	UniRef90	UniRef90_A0A2N0UXT6	Phage minor capsid protein 2	NA
UHGV-1381973_23	eggNOG-mapper	33035.JPJF01000093_gene2255	NA	NA
UHGV-1381973_23	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1381973_23	Pfam	PF03496	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
UHGV-1381973_23	COG	COG5585	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	NA
UHGV-1381973_23	Structural annotation	PF06152	NA	NA
UHGV-1381973_24	PHROG	phrog_533	portal protein	head and packaging
UHGV-1381973_24	UniRef90	UniRef90_A0A3D0XB31	Capsid protein	NA
UHGV-1381973_24	eggNOG-mapper	742740.HMPREF9474_03501	NA	NA
UHGV-1381973_24	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1381973_25	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1381973_25	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-1381973_25	UniRef90	UniRef90_A0A374N1S8	Terminase	NA
UHGV-1381973_25	eggNOG-mapper	1282664.H354_06621	Phage terminase, large subunit, PBSX family	NA
UHGV-1381973_25	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1381973_25	COG	COG1783	Phage terminase large subunit	NA
UHGV-1381973_25	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1381973_26	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-1381973_26	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-1381973_26	UniRef90	UniRef90_UPI001897F57D	terminase small subunit	NA
UHGV-1381973_26	eggNOG-mapper	1256908.HMPREF0373_00489	Terminase small subunit	NA
UHGV-1381973_26	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-1381973_26	COG	COG3728	Phage terminase, small subunit	NA
UHGV-1381973_26	Structural annotation	PF03592, COG3728	NA	NA
UHGV-1381973_27	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1381973_27	UniRef90	UniRef90_A0A2N0UXQ6	NA	NA
UHGV-1381973_27	eggNOG-mapper	1401067.HMPREF0872_06835	NA	NA
UHGV-1381973_27	Pfam	PF07374	NA	DUF1492
UHGV-1381973_27	Structural annotation	PF07374, MF_00674, TIGR01636, COG2739	NA	NA
UHGV-1381973_30	UniRef90	UniRef90_UPI000E4DC4DA	helix-turn-helix domain-containing protein	NA
UHGV-1381973_30	Structural annotation	PF15597	NA	NA
UHGV-1381973_33	PHROG	phrog_757	DNA methyltransferase	other
UHGV-1381973_33	UniRef90	UniRef90_A0A417JTT5	DNA cytosine methyltransferase	NA
UHGV-1381973_33	eggNOG-mapper	1235790.C805_00032	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-1381973_33	COG	COG0270	DNA-cytosine methylase	NA
UHGV-1381973_33	Structural annotation	PF00145, MF_01872, TIGR00675, COG0270	NA	NA
UHGV-1381973_35	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-1381973_35	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-1381973_35	UniRef90	UniRef90_A0A1C6JHY9	DNA helicase	NA
UHGV-1381973_35	eggNOG-mapper	1280689.AUJC01000011_gene1502	Participates in initiation and elongation during chromosome replication	NA
UHGV-1381973_35	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-1381973_35	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-1381973_35	COG	COG0305	Replicative DNA helicase	NA
UHGV-1381973_35	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-1381973_36	PHROG	phrog_2514	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-1381973_36	eggNOG-mapper	397291.C804_01603	DnaD domain protein	NA
UHGV-1381973_36	COG	COG3935	DNA replication protein DnaD	NA
UHGV-1381973_36	Structural annotation	PF10771, MF_01177, TIGR01714, COG5529	NA	NA
UHGV-1381973_37	PHROG	phrog_3490	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UHGV-1381973_37	UniRef90	UniRef90_UPI000C0868DD	ERCC4 domain-containing protein	NA
UHGV-1381973_37	eggNOG-mapper	476272.RUMHYD_01740	ERCC4 domain	NA
UHGV-1381973_37	Pfam	PF02732	ERCC4 domain	ERCC4
UHGV-1381973_37	COG	COG1948	ERCC4-type crossover junction endonuclease	NA
UHGV-1381973_37	Structural annotation	PF02732, NF040956, COG1948	NA	NA
UHGV-1381973_38	PHROG	phrog_18107	NA	unknown function
UHGV-1381973_38	eggNOG-mapper	476272.RUMHYD_02831	NA	NA
UHGV-1381973_38	Structural annotation	PF05037	NA	NA
UHGV-1381973_39	PHROG	phrog_2872	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1381973_39	UniRef90	UniRef90_UPI000C080C89	ATP-binding protein	NA
UHGV-1381973_39	eggNOG-mapper	1415774.U728_1119	AAA domain	NA
UHGV-1381973_39	Structural annotation	PF13479, MF_00350, TIGR01618, COG0468	NA	NA
UHGV-1381973_42	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-1381973_42	eggNOG-mapper	693746.OBV_43240	NA	NA
UHGV-1381973_42	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-1381973_42	Structural annotation	PF01507, MF_00064, TIGR00434, COG0175	NA	NA
UHGV-1381973_47	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1381973_47	UniRef90	UniRef90_A0A2N0ULV0	Helix-turn-helix domain protein	NA
UHGV-1381973_47	eggNOG-mapper	445335.CBN_3090	Helix-turn-helix domain	NA
UHGV-1381973_47	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1381973_47	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-1381973_48	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-1381973_48	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1381973_48	UniRef90	UniRef90_A0A2N0ULR3	HTH-type transcriptional regulator ImmR	NA
UHGV-1381973_48	eggNOG-mapper	649747.HMPREF0083_01078	Transcriptional regulator	NA
UHGV-1381973_48	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1381973_48	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-1381973_49	PHROG	phrog_1914	NA	unknown function
UHGV-1381973_49	UniRef90	UniRef90_A0A2N0ULV1	Peptidase_M78 domain-containing protein	NA
UHGV-1381973_49	eggNOG-mapper	1160721.RBI_I01604	NA	NA
UHGV-1381973_49	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-1381973_49	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-1381973_49	Structural annotation	PF06114, COG2856	NA	NA
UHGV-1381973_50	Structural annotation	PF20505, MF_00194, NF001462, COG2974	NA	NA
UHGV-1381973_51	Structural annotation	PF15968	NA	NA
UHGV-1381973_52	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-1381973_52	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1381973_52	UniRef90	UniRef90_A0A374NFM5	XRE family transcriptional regulator	NA
UHGV-1381973_52	eggNOG-mapper	1567011.A0A0A7RUJ5_9VIRU	protein disulfide oxidoreductase activity	NA
UHGV-1381973_52	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-1381973_52	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1381973_52	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-1381973_53	KOfam	K14059	int; integrase	NA
UHGV-1381973_53	PHROG	phrog_1	integrase	integration and excision
UHGV-1381973_53	UniRef90	UniRef90_UPI0008345DF0	tyrosine-type recombinase/integrase	NA
UHGV-1381973_53	eggNOG-mapper	693746.OBV_01970	Phage integrase family	NA
UHGV-1381973_53	Pfam	PF02899	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_1
UHGV-1381973_53	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1381973_53	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1381973_53	Structural annotation	PF00589, PF13495, MF_02055, TIGR02225, COG4974	NA	NA
UHGV-1381973_54	PHROG	phrog_12156	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-1381973_54	UniRef90	UniRef90_A0A412DYS3	HATPase_c_4 domain-containing protein	NA
UHGV-1381973_54	eggNOG-mapper	1384065.JAGS01000001_gene3244	Putative DNA-binding domain	NA
UHGV-1381973_54	Pfam	PF13749	Putative ATP-dependent DNA helicase recG C-terminal	HATPase_c_4
UHGV-1381973_54	COG	COG2865	Predicted transcriptional regulator, contains HTH domain	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1381973	Yes	35,997 bps	40.14%	99.90%	0.9735
UHGV-0057682	No	31,532 bps	40.34%	88.67%	0.9753
UHGV-1390057	No	31,532 bps	40.34%	88.67%	0.9753
UHGV-0379957	No	20,493 bps	39.09%	57.20%	0.9742
UHGV-1656914	No	10,108 bps	43.10%	28.45%	0.9807