vOTU-068999

Overview

vOTU representative UHGV-0201985

No. of genomes 3

Genome length 37,150 bps

Completeness 91.01% (high-quality)

Host Unclassified

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-068999
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-04766 › vGENUS-08887 › vSUBGEN-09558 › vOTU-068999
Host taxonomy
Host range breadth
Host prediction method
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0201985
BioSample	SAMN05827010
Genome length	37,150 bps
CheckV completeness	91.01% (high-quality)
CheckV contamination	0.00%
CDS count	66
CDS density	91.69%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0201985_1	KOfam	K07705	lytT, lytR; two-component system, LytTR family, response regulator LytT	NA
UHGV-0201985_1	PHROG	phrog_8810	NA	unknown function
UHGV-0201985_1	UniRef90	UniRef90_A0A2S6HU86	LytTR family two component transcriptional regulator	NA
UHGV-0201985_1	eggNOG-mapper	931626.Awo_c00820	LytTr DNA-binding domain	NA
UHGV-0201985_1	Pfam	PF04397	LytTr DNA-binding domain	LytTR
UHGV-0201985_1	COG	COG3279	DNA-binding response regulator, LytR/AlgR family	NA
UHGV-0201985_4	KOfam	K00689	E2.4.1.5; dextransucrase [EC:2.4.1.5]	NA
UHGV-0201985_4	PHROG	phrog_38078	NA	unknown function
UHGV-0201985_4	UniRef90	UniRef90_A0A7U9JRS5	Cell wall-binding repeat-containing protein	NA
UHGV-0201985_4	eggNOG-mapper	1304866.K413DRAFT_1245	Putative cell wall binding repeat	NA
UHGV-0201985_4	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-0201985_4	Pfam	PF19127	Choline-binding repeat	Choline_bind_3
UHGV-0201985_4	COG	COG5263	Glucan-binding domain (YG repeat)	NA
UHGV-0201985_4	Structural annotation	PF19127, PF05382, MF_00727, TIGR04035, NF033742, COG5263	NA	NA
UHGV-0201985_5	PHROG	phrog_199	holin	lysis
UHGV-0201985_5	UniRef90	UniRef90_D3AUA6	Toxin secretion/phage lysis holin	NA
UHGV-0201985_5	eggNOG-mapper	1121333.JMLH01000047_gene1005	Bacteriophage holin family	NA
UHGV-0201985_5	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0201985_5	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0201985_5	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0201985_6	PHROG	phrog_134	NA	unknown function
UHGV-0201985_6	UniRef90	UniRef90_A0A414B032	XkdX family protein	NA
UHGV-0201985_6	eggNOG-mapper	1298920.KI911353_gene543	Phage uncharacterised protein (Phage_XkdX)	NA
UHGV-0201985_6	Pfam	PF09693	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
UHGV-0201985_6	NCBIFam	TIGR01669.1	XkdX family protein	NA
UHGV-0201985_6	Structural annotation	PF09693, TIGR01669	NA	NA
UHGV-0201985_7	eggNOG-mapper	1298920.KI911353_gene2672	NA	NA
UHGV-0201985_8	UniRef90	UniRef90_A0A3E2NCP8	NA	NA
UHGV-0201985_8	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0201985_9	PHROG	phrog_12764	NA	unknown function
UHGV-0201985_9	Structural annotation	PF01176, MF_00085, TIGR00523, COG0361	NA	NA
UHGV-0201985_10	PHROG	phrog_26795	NA	unknown function
UHGV-0201985_10	eggNOG-mapper	742740.HMPREF9474_04294	NA	NA
UHGV-0201985_10	Structural annotation	PF14594, NF033848, COG4379	NA	NA
UHGV-0201985_11	PHROG	phrog_37549	virion structural protein	head and packaging
UHGV-0201985_11	UniRef90	UniRef90_UPI00117786D0	DNRLRE domain-containing protein	NA
UHGV-0201985_11	eggNOG-mapper	1195236.CTER_5103	NA	NA
UHGV-0201985_11	NCBIFam	NF033679.1	DNRLRE domain-containing protein	NA
UHGV-0201985_11	Structural annotation	PF06995, PF02010, MF_04116, TIGR02126, NF041431, COG3499, COG2372	NA	NA
UHGV-0201985_12	PHROG	phrog_2276	tail length tape measure protein	tail
UHGV-0201985_12	UniRef90	UniRef90_A0A414AVE7	PhageMin_Tail domain-containing protein	NA
UHGV-0201985_12	eggNOG-mapper	742740.HMPREF9474_04296	Phage tail tape measure protein TP901	NA
UHGV-0201985_12	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0201985_12	Structural annotation	TIGR01760, COG5280	NA	NA
UHGV-0201985_14	PHROG	phrog_88	major tail protein	tail
UHGV-0201985_14	UniRef90	UniRef90_A0A844J228	Phage tail protein	NA
UHGV-0201985_14	eggNOG-mapper	742740.HMPREF9474_04299	NA	NA
UHGV-0201985_14	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0201985_14	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0201985_15	Structural annotation	PF06141	NA	NA
UHGV-0201985_16	Structural annotation	TIGR01725	NA	NA
UHGV-0201985_17	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-0201985_17	UniRef90	UniRef90_A0A373XZI9	Phage head-tail adapter protein	NA
UHGV-0201985_17	eggNOG-mapper	358681.BBR47_29190	head-tail adaptor	NA
UHGV-0201985_17	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0201985_17	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0201985_18	PHROG	phrog_5223	neck protein	connector
UHGV-0201985_18	UniRef90	UniRef90_B6W9Y5	Putative phage DNA packaging protein	NA
UHGV-0201985_18	eggNOG-mapper	561177.ANHYDRO_01411	NA	NA
UHGV-0201985_18	Structural annotation	TIGR01560	NA	NA
UHGV-0201985_19	PHROG	phrog_10	major head protein	head and packaging
UHGV-0201985_19	UniRef90	UniRef90_A0A352P9J9	Phage major capsid protein	NA
UHGV-0201985_19	eggNOG-mapper	1280689.AUJC01000011_gene1521	Phage major capsid protein, HK97 family	NA
UHGV-0201985_19	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0201985_19	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0201985_19	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0201985_19	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0201985_20	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0201985_20	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0201985_20	UniRef90	UniRef90_A0A352P9K0	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0201985_20	eggNOG-mapper	1169144.KB910924_gene337	Serine dehydrogenase proteinase	NA
UHGV-0201985_20	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0201985_20	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0201985_20	Structural annotation	PF00574, MF_00444, NF011091, COG0740	NA	NA
UHGV-0201985_21	PHROG	phrog_12	portal protein	head and packaging
UHGV-0201985_21	UniRef90	UniRef90_A0A352P9K1	Phage portal protein	NA
UHGV-0201985_21	eggNOG-mapper	1235793.C809_01918	Phage portal protein	NA
UHGV-0201985_21	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0201985_21	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0201985_21	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0201985_22	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0201985_22	UniRef90	UniRef90_A0A844IUX2	Terminase large subunit	NA
UHGV-0201985_22	eggNOG-mapper	626523.GCWU000342_01028	Phage terminase-like protein large subunit	NA
UHGV-0201985_22	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0201985_22	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0201985_22	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0201985_22	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0201985_23	PHROG	phrog_1066	NA	unknown function
UHGV-0201985_23	eggNOG-mapper	1341151.ASZU01000004_gene265	NA	NA
UHGV-0201985_23	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0201985_24	UniRef90	UniRef90_A0A7U9JT57	Zinc ribbon protein, nin one binding (NOB1) type	NA
UHGV-0201985_25	PHROG	phrog_643	transcriptional regulator	transcription regulation
UHGV-0201985_25	UniRef90	UniRef90_A0A844IWP5	NA	NA
UHGV-0201985_25	Structural annotation	PF11195	NA	NA
UHGV-0201985_28	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0201985_28	UniRef90	UniRef90_A0A174XSZ8	Prophage LambdaBa04, GP54	NA
UHGV-0201985_28	eggNOG-mapper	318464.IO99_13775	HNH nucleases	NA
UHGV-0201985_28	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0201985_32	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0201985_32	UniRef90	UniRef90_UPI001D089637	NA	NA
UHGV-0201985_32	eggNOG-mapper	1304866.K413DRAFT_3028	NA	NA
UHGV-0201985_32	Structural annotation	PF04545	NA	NA
UHGV-0201985_36	KOfam	K24451	zim; modification methylase	NA
UHGV-0201985_36	PHROG	phrog_67	DNA methyltransferase	other
UHGV-0201985_36	UniRef90	UniRef90_A0A3R6Q0Y1	Methyltransferase	NA
UHGV-0201985_36	eggNOG-mapper	411473.RUMCAL_00273	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-0201985_36	PADLOC	MTase_II_00139	Type II methyltransferase	RM
UHGV-0201985_36	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0201985_36	COG	COG0863	DNA modification methylase	NA
UHGV-0201985_36	Structural annotation	PF01555, MF_01872, NF010253, COG0863	NA	NA
UHGV-0201985_37	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0201985_37	UniRef90	UniRef90_A0A3R6MX70	Helicase	NA
UHGV-0201985_37	eggNOG-mapper	592028.GCWU000321_01359	DEAD-like helicases superfamily	NA
UHGV-0201985_37	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-0201985_37	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-0201985_37	Structural annotation	PF18766, PF16203, MF_01821, TIGR04095, COG0553	NA	NA
UHGV-0201985_39	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0201985_39	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0201985_39	UniRef90	UniRef90_A0A413LPL3	Single-stranded DNA-binding protein	NA
UHGV-0201985_39	eggNOG-mapper	1163671.JAGI01000002_gene3943	Single-stranded DNA-binding protein	NA
UHGV-0201985_39	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0201985_39	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0201985_39	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0201985_39	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0201985_39	Structural annotation	PF00436, MF_00984, NF005242, COG0629	NA	NA
UHGV-0201985_40	PHROG	phrog_2245	nucleoside triphosphate pyrophosphohydrolase	other
UHGV-0201985_40	UniRef90	UniRef90_A0A1E3UAI9	MazG domain-containing protein	NA
UHGV-0201985_40	eggNOG-mapper	658655.HMPREF0988_00885	NA	NA
UHGV-0201985_40	Structural annotation	PF10400, MF_01019, NF010671, COG0140	NA	NA
UHGV-0201985_43	PHROG	phrog_9804	NA	unknown function
UHGV-0201985_43	UniRef90	UniRef90_A0A352P9M2	Inhibitor_G39P domain-containing protein	NA
UHGV-0201985_43	eggNOG-mapper	697281.Mahau_0086	Loader and inhibitor of phage G40P	NA
UHGV-0201985_43	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-0201985_43	Structural annotation	PF11417	NA	NA
UHGV-0201985_44	PHROG	phrog_6251	replisome organizer DnaA-like	DNA, RNA and nucleotide metabolism
UHGV-0201985_44	UniRef90	UniRef90_A0A4D6AAE1	Replication initiation protein	NA
UHGV-0201985_44	eggNOG-mapper	86416.Clopa_1685	DnaD domain protein	NA
UHGV-0201985_44	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0201985_44	Structural annotation	PF09681, TIGR01714	NA	NA
UHGV-0201985_46	PHROG	phrog_244	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0201985_46	eggNOG-mapper	1304866.K413DRAFT_1199	NA	NA
UHGV-0201985_46	Structural annotation	PF01870, MF_01490, NF040854, COG1591	NA	NA
UHGV-0201985_47	PHROG	phrog_398	NA	unknown function
UHGV-0201985_47	UniRef90	UniRef90_UPI0011780B2F	putative HNHc nuclease	NA
UHGV-0201985_47	eggNOG-mapper	33035.JPJF01000122_gene2462	Putative HNHc nuclease	NA
UHGV-0201985_47	Pfam	PF16784	Putative HNHc nuclease	HNHc_6
UHGV-0201985_47	Structural annotation	PF16784	NA	NA
UHGV-0201985_48	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0201985_48	eggNOG-mapper	1238184.CM001792_gene2549	NA	NA
UHGV-0201985_48	Structural annotation	PF09588, TIGR04328, COG5377	NA	NA
UHGV-0201985_49	UniRef90	UniRef90_UPI001D32BF75	NA	NA
UHGV-0201985_49	eggNOG-mapper	33035.JPJF01000135_gene5082	NA	NA
UHGV-0201985_49	Structural annotation	PF06378, TIGR00607, COG5055	NA	NA
UHGV-0201985_51	PHROG	phrog_30234	NA	unknown function
UHGV-0201985_51	eggNOG-mapper	1304866.K413DRAFT_3014	NA	NA
UHGV-0201985_58	PHROG	phrog_7880	NA	unknown function
UHGV-0201985_58	eggNOG-mapper	574375.BAGA_05545	NA	NA
UHGV-0201985_60	PHROG	phrog_6058	NA	unknown function
UHGV-0201985_60	UniRef90	UniRef90_A0A4Q7P3C7	Prolyl-tRNA synthetase	NA
UHGV-0201985_60	eggNOG-mapper	742733.HMPREF9469_05094	NA	NA
UHGV-0201985_60	Structural annotation	PF12728, NF040990	NA	NA
UHGV-0201985_61	PHROG	phrog_373	anti-repressor	transcription regulation
UHGV-0201985_61	UniRef90	UniRef90_A0A7U9JWI4	ORF6N domain-containing protein,ORF6C domain-containing protein	NA
UHGV-0201985_61	eggNOG-mapper	1304866.K413DRAFT_3008	Phage regulatory protein	NA
UHGV-0201985_61	Pfam	PF10543	ORF6N domain	ORF6N
UHGV-0201985_61	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-0201985_61	COG	COG3646	Phage regulatory protein Rha	NA
UHGV-0201985_62	UniRef90	UniRef90_D9R8Y9	DNA binding domain protein, excisionase family	NA
UHGV-0201985_62	eggNOG-mapper	610130.Closa_1362	Helix-turn-helix domain	NA
UHGV-0201985_62	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0201985_62	NCBIFam	TIGR01764.1	excisionase family DNA-binding protein	NA
UHGV-0201985_62	Structural annotation	PF12728, NF040990, COG3311	NA	NA
UHGV-0201985_63	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0201985_63	UniRef90	UniRef90_A0A3D1FPJ8	XRE family transcriptional regulator	NA
UHGV-0201985_63	eggNOG-mapper	610130.Closa_1361	Helix-turn-helix XRE-family like proteins	NA
UHGV-0201985_63	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0201985_63	COG	COG3093	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	NA
UHGV-0201985_63	Structural annotation	PF12844, NF041951, COG1476	NA	NA
UHGV-0201985_64	PHROG	phrog_23726	NA	unknown function
UHGV-0201985_64	UniRef90	UniRef90_A0A844IWQ3	NA	NA
UHGV-0201985_64	eggNOG-mapper	742740.HMPREF9474_04329	NA	NA
UHGV-0201985_65	KOfam	K14059	int; integrase	NA
UHGV-0201985_65	PHROG	phrog_1	integrase	integration and excision
UHGV-0201985_65	UniRef90	UniRef90_A0A3D1FQ92	Integrase	NA
UHGV-0201985_65	eggNOG-mapper	742733.HMPREF9469_05096	Belongs to the 'phage' integrase family	NA
UHGV-0201985_65	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-0201985_65	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0201985_65	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0201985_65	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0201985_66	UniRef90	UniRef90_A0A174ZB39	GGGtGRT protein	NA
UHGV-0201985_66	eggNOG-mapper	1163671.JAGI01000002_gene2589	GGGtGRT protein	NA
UHGV-0201985_66	Pfam	PF14057	GGGtGRT protein	GGGtGRT
UHGV-0201985_66	Structural annotation	PF14057	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0201985	Yes	37,150 bps	39.68%	91.01%	0.9805
UHGV-0141191	No	16,585 bps	40.10%	40.65%	0.9785
UHGV-1782788	No	16,585 bps	40.10%	40.65%	0.9785