vOTU-070059

Overview

vOTU representative UHGV-1980694

No. of genomes 1

Genome length 34,898 bps

Completeness 99.19% (high-quality)

Host Ruminococcus E bromii B

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-070059
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00134 › vGENUS-00111 › vSUBGEN-11341 › vOTU-070059
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › Ruminococcus E › Ruminococcus E bromii B
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1980694
BioSample	SAMN03922500
Genome length	34,898 bps
CheckV completeness	99.19% (high-quality)
CheckV contamination	0.00%
CDS count	52
CDS density	93.29%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1980694_1	Structural annotation	PF10651	NA	NA
UHGV-1980694_2	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-1980694_2	UniRef90	UniRef90_A0A348ZBV6	Prophage_tail domain-containing protein	NA
UHGV-1980694_2	eggNOG-mapper	1462527.CCDM010000003_gene3730	gp58-like protein	NA
UHGV-1980694_2	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1980694_2	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-1980694_2	COG	COG1511	NA	NA
UHGV-1980694_2	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-1980694_3	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1980694_3	UniRef90	UniRef90_A0A1G5CPA2	Phage-related protein	NA
UHGV-1980694_3	eggNOG-mapper	1160721.RBI_I01575	Phage tail protein	NA
UHGV-1980694_3	COG	COG4722	Phage-related protein YomH	NA
UHGV-1980694_3	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-1980694_4	KOfam	K20283	GOLGA4; golgin subfamily A member 4	NA
UHGV-1980694_4	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-1980694_4	UniRef90	UniRef90_A0A412ULX0	PhageMin_Tail domain-containing protein	NA
UHGV-1980694_4	eggNOG-mapper	588581.Cpap_1264	Tail tape measure protein, TP901 family	NA
UHGV-1980694_4	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1980694_4	COG	COG5280	Phage-related minor tail protein	NA
UHGV-1980694_4	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-1980694_6	Structural annotation	PF11836	NA	NA
UHGV-1980694_7	PHROG	phrog_88	major tail protein	tail
UHGV-1980694_7	UniRef90	UniRef90_A0A1G5CNS8	Phage major tail protein, phi13 family	NA
UHGV-1980694_7	eggNOG-mapper	1321782.HMPREF1986_01362	phage major tail protein, phi13 family	NA
UHGV-1980694_7	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-1980694_7	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-1980694_8	UniRef90	UniRef90_UPI000E5564A4	HK97 gp10 family phage protein	NA
UHGV-1980694_8	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1980694_8	Structural annotation	TIGR01725	NA	NA
UHGV-1980694_9	eggNOG-mapper	272623.L59277	NA	NA
UHGV-1980694_9	Structural annotation	PF05657, TIGR04412	NA	NA
UHGV-1980694_10	PHROG	phrog_19734	NA	unknown function
UHGV-1980694_10	eggNOG-mapper	86416.Clopa_0343	NA	NA
UHGV-1980694_10	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-1980694_11	PHROG	phrog_749	NA	unknown function
UHGV-1980694_11	UniRef90	UniRef90_A0A1G5CMX8	Phage gp6-like head-tail connector protein	NA
UHGV-1980694_11	eggNOG-mapper	1211817.CCAT010000053_gene2133	NA	NA
UHGV-1980694_12	PHROG	phrog_10	major head protein	head and packaging
UHGV-1980694_12	UniRef90	UniRef90_A0A412ULW9	Phage major capsid protein	NA
UHGV-1980694_12	eggNOG-mapper	1211817.CCAT010000053_gene2132	Phage capsid family	NA
UHGV-1980694_12	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1980694_12	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1980694_12	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1980694_12	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1980694_13	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-1980694_13	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-1980694_13	UniRef90	UniRef90_A0A412ULU1	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-1980694_13	eggNOG-mapper	86416.Clopa_0340	Belongs to the peptidase S14 family	NA
UHGV-1980694_13	Pfam	PF00574	Clp protease	CLP_protease
UHGV-1980694_13	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-1980694_13	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-1980694_14	PHROG	phrog_12	portal protein	head and packaging
UHGV-1980694_14	UniRef90	UniRef90_A0A412ULV9	Phage portal protein	NA
UHGV-1980694_14	eggNOG-mapper	1415774.U728_1254	Phage portal protein	NA
UHGV-1980694_14	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1980694_14	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-1980694_14	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1980694_14	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-1980694_15	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1980694_15	UniRef90	UniRef90_A0A412UM03	Terminase large subunit	NA
UHGV-1980694_15	eggNOG-mapper	86416.Clopa_0337	Phage Terminase	NA
UHGV-1980694_15	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1980694_15	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1980694_15	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1980694_15	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-1980694_16	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-1980694_16	UniRef90	UniRef90_A0A1M5U1D5	Phage terminase, small subunit	NA
UHGV-1980694_16	eggNOG-mapper	1211817.CCAT010000053_gene2128	NA	NA
UHGV-1980694_16	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-1980694_16	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-1980694_17	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1980694_17	UniRef90	UniRef90_A0A412ULY9	HNH endonuclease	NA
UHGV-1980694_17	eggNOG-mapper	1158607.UAU_01026	HNH endonuclease	NA
UHGV-1980694_17	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1980694_17	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1980694_18	PHROG	phrog_31049	NA	unknown function
UHGV-1980694_18	eggNOG-mapper	431943.CKL_4074	NA	NA
UHGV-1980694_18	Structural annotation	TIGR01636	NA	NA
UHGV-1980694_19	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1980694_19	eggNOG-mapper	1235800.C819_00515	NA	NA
UHGV-1980694_19	Structural annotation	PF21578, NF041486	NA	NA
UHGV-1980694_22	PHROG	phrog_824	NA	unknown function
UHGV-1980694_22	UniRef90	UniRef90_A0A3D3D6C6	VRR-NUC domain-containing protein	NA
UHGV-1980694_22	eggNOG-mapper	397288.C806_00096	VRR_NUC	NA
UHGV-1980694_22	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-1980694_22	Structural annotation	PF08774	NA	NA
UHGV-1980694_23	PHROG	phrog_24518	NA	unknown function
UHGV-1980694_23	eggNOG-mapper	1519439.JPJG01000077_gene922	NA	NA
UHGV-1980694_24	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1980694_24	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1980694_24	UniRef90	UniRef90_A0A374N9T4	XRE family transcriptional regulator	NA
UHGV-1980694_24	eggNOG-mapper	935845.JADQ01000015_gene3206	Cro/C1-type HTH DNA-binding domain	NA
UHGV-1980694_24	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1980694_24	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-1980694_24	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-1980694_25	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-1980694_25	PHROG	phrog_1	integrase	integration and excision
UHGV-1980694_25	UniRef90	UniRef90_UPI001B3C6404	tyrosine-type recombinase/integrase	NA
UHGV-1980694_25	eggNOG-mapper	1235793.C809_01951	Phage integrase, N-terminal SAM-like domain	NA
UHGV-1980694_25	Pfam	PF13495	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
UHGV-1980694_25	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1980694_25	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-1980694_25	Structural annotation	PF00589, PF13495, MF_01808, TIGR02224, COG4973	NA	NA
UHGV-1980694_26	PHROG	phrog_323	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1980694_26	UniRef90	UniRef90_UPI001C01CFF8	SANT/Myb domain-containing protein	NA
UHGV-1980694_26	eggNOG-mapper	394503.Ccel_3305	SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains	NA
UHGV-1980694_26	dbAPIS	APIS006	Trigger programmed cell death (PCD) by P4 prophage.	NA
UHGV-1980694_26	Structural annotation	PF11112, NF040595	NA	NA
UHGV-1980694_27	KOfam	K03427	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	NA
UHGV-1980694_27	PHROG	phrog_5696	NA	unknown function
UHGV-1980694_27	UniRef90	UniRef90_UPI001B3C9C54	N-6 DNA methylase	NA
UHGV-1980694_27	eggNOG-mapper	397291.C804_06560	N-6 DNA Methylase	NA
UHGV-1980694_27	Pfam	PF02384	N-6 DNA Methylase	N6_Mtase
UHGV-1980694_27	COG	COG0286	Type I restriction-modification system, DNA methylase subunit	NA
UHGV-1980694_27	Structural annotation	COG0286	NA	NA
UHGV-1980694_28	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-1980694_28	PHROG	phrog_6218	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-1980694_28	UniRef90	UniRef90_A0A3D3D7T1	ParB domain-containing protein	NA
UHGV-1980694_28	eggNOG-mapper	1160721.RBI_I01596	ParB-like nuclease domain	NA
UHGV-1980694_28	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-1980694_28	NCBIFam	TIGR00180.1	ParB/RepB/Spo0J family partition protein	NA
UHGV-1980694_28	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-1980694_28	Structural annotation	PF18579, MF_02015, TIGR00180, COG1475	NA	NA
UHGV-1980694_32	Structural annotation	COG1862	NA	NA
UHGV-1980694_33	PHROG	phrog_6058	NA	unknown function
UHGV-1980694_33	Structural annotation	NF033787	NA	NA
UHGV-1980694_34	Structural annotation	PF15597	NA	NA
UHGV-1980694_35	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-1980694_35	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-1980694_35	UniRef90	UniRef90_UPI001C034617	phosphoadenosine phosphosulfate reductase family protein	NA
UHGV-1980694_35	eggNOG-mapper	1408437.JNJN01000032_gene2312	Phosphoadenosine phosphosulfate reductase	NA
UHGV-1980694_35	PADLOC	BrxP_00001	BrxP	BREX
UHGV-1980694_35	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-1980694_35	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-1980694_35	Structural annotation	PF01507, MF_00063, NF010369, COG0175	NA	NA
UHGV-1980694_38	PHROG	phrog_824	NA	unknown function
UHGV-1980694_38	UniRef90	UniRef90_A0A374MXE9	VRR-NUC domain-containing protein	NA
UHGV-1980694_38	eggNOG-mapper	1235792.C808_00622	VRR_NUC	NA
UHGV-1980694_38	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-1980694_38	Structural annotation	PF08774	NA	NA
UHGV-1980694_39	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-1980694_39	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-1980694_39	UniRef90	UniRef90_A0A374MYR7	IstB_IS21 domain-containing protein	NA
UHGV-1980694_39	eggNOG-mapper	1507.HMPREF0262_00302	Bacterial dnaA protein	NA
UHGV-1980694_39	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-1980694_39	COG	COG1484	DNA replication protein DnaC	NA
UHGV-1980694_39	Structural annotation	PF01695, MF_01158, NF005378, COG1484	NA	NA
UHGV-1980694_40	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1980694_40	UniRef90	UniRef90_A0A374NA85	NA	NA
UHGV-1980694_40	eggNOG-mapper	1235790.C805_00030	NA	NA
UHGV-1980694_40	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-1980694_40	COG	COG3935	DNA replication protein DnaD	NA
UHGV-1980694_40	Structural annotation	PF14297	NA	NA
UHGV-1980694_41	PHROG	phrog_398	NA	unknown function
UHGV-1980694_41	UniRef90	UniRef90_UPI000C7B20DA	putative HNHc nuclease	NA
UHGV-1980694_41	eggNOG-mapper	293826.Amet_2584	Putative HNHc nuclease	NA
UHGV-1980694_41	Pfam	PF16784	Putative HNHc nuclease	HNHc_6
UHGV-1980694_41	Structural annotation	PF16784	NA	NA
UHGV-1980694_42	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-1980694_42	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-1980694_42	UniRef90	UniRef90_A0A373XYI8	MBL fold metallo-hydrolase	NA
UHGV-1980694_42	eggNOG-mapper	888059.HMPREF9071_2100	Beta-lactamase superfamily domain	NA
UHGV-1980694_42	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-1980694_42	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-1980694_42	Structural annotation	PF12706, MF_01818, TIGR03307, COG1234	NA	NA
UHGV-1980694_43	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-1980694_43	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1980694_43	UniRef90	UniRef90_A0A374N9W0	Recombinase	NA
UHGV-1980694_43	eggNOG-mapper	428127.EUBDOL_01509	RecT family	NA
UHGV-1980694_43	Pfam	PF03837	RecT family	RecT
UHGV-1980694_43	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-1980694_43	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-1980694_43	Structural annotation	PF03837, TIGR00616, COG3723	NA	NA
UHGV-1980694_44	PHROG	phrog_674	NA	unknown function
UHGV-1980694_44	UniRef90	UniRef90_A0A374N9T8	NA	NA
UHGV-1980694_44	eggNOG-mapper	1408437.JNJN01000039_gene373	NA	NA
UHGV-1980694_44	Pfam	PF07083	NA	DUF1351
UHGV-1980694_44	Structural annotation	PF07083	NA	NA
UHGV-1980694_45	Structural annotation	PF04570, COG2075	NA	NA
UHGV-1980694_48	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-1980694_50	PHROG	phrog_2232	NA	unknown function
UHGV-1980694_50	UniRef90	UniRef90_UPI00164B82D7	NA	NA
UHGV-1980694_50	eggNOG-mapper	748224.HMPREF9436_01448	NA	NA
UHGV-1980694_50	Pfam	PF14337	Abortive infection alpha	Abi_alpha
UHGV-1980694_50	Structural annotation	PF14337, TIGR03899	NA	NA
UHGV-1980694_52	eggNOG-mapper	97138.C820_00203	Transcriptional	NA
UHGV-1980694_52	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1980694	Yes	34,898 bps	39.53%	99.19%	0.9791