vOTU-070995

Overview

vOTU representative UHGV-2111940

No. of genomes 4

Genome length 38,107 bps

Completeness 97.33% (high-quality)

Host NSJ-51 sp900549795

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-070995
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00040 › vSUBFAM-03816 › vGENUS-12715 › vSUBGEN-19607 › vOTU-070995
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › NSJ-51 › NSJ-51 sp900549795
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-2111940
BioSample	NA
Genome length	38,107 bps
CheckV completeness	97.33% (high-quality)
CheckV contamination	0.00%
CDS count	52
CDS density	90.96%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2111940_1	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-2111940_1	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2111940_1	UniRef90	UniRef90_A0A8J6JEC0	Single-stranded DNA-binding protein	NA
UHGV-2111940_1	eggNOG-mapper	411467.BACCAP_02389	Single-strand binding protein family	NA
UHGV-2111940_1	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-2111940_1	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-2111940_1	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-2111940_1	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-2111940_1	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-2111940_2	PHROG	phrog_561	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-2111940_2	UniRef90	UniRef90_A0A174RC35	RecT family	NA
UHGV-2111940_2	eggNOG-mapper	1215092.PA6_009_00610	NA	NA
UHGV-2111940_2	Pfam	PF03837	RecT family	RecT
UHGV-2111940_2	Structural annotation	PF03837, TIGR01913, COG3723	NA	NA
UHGV-2111940_3	PHROG	phrog_298	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-2111940_3	UniRef90	UniRef90_UPI001C97FE83	PD-(D/E)XK nuclease family protein	NA
UHGV-2111940_3	COG	COG2887	RecB family exonuclease	NA
UHGV-2111940_3	Structural annotation	PF12705, MF_03030, TIGR00372, COG2887	NA	NA
UHGV-2111940_5	PHROG	phrog_1123	NA	unknown function
UHGV-2111940_5	UniRef90	UniRef90_UPI001EDDCAAF	DNA gyrase	NA
UHGV-2111940_5	eggNOG-mapper	411483.FAEPRAA2165_01885	NA	NA
UHGV-2111940_5	Pfam	PF12840	Helix-turn-helix domain	HTH_20
UHGV-2111940_5	Structural annotation	PF04703, MF_01804, TIGR00373, COG1695	NA	NA
UHGV-2111940_6	PHROG	phrog_19349	NA	unknown function
UHGV-2111940_6	UniRef90	UniRef90_UPI001C036D5E	lytic transglycosylase domain-containing protein	NA
UHGV-2111940_6	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-2111940_6	COG	COG0741	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	NA
UHGV-2111940_6	Structural annotation	PF01464, MF_01616, NF011856, COG0741	NA	NA
UHGV-2111940_7	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-2111940_7	UniRef90	UniRef90_UPI001EDF1E9D	phosphoadenosine phosphosulfate reductase family protein	NA
UHGV-2111940_7	eggNOG-mapper	742740.HMPREF9474_03063	NA	NA
UHGV-2111940_7	PADLOC	SspD_00001	SspD	SSP
UHGV-2111940_7	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-2111940_7	Structural annotation	PF01507, MF_00063, NF005316, COG0175	NA	NA
UHGV-2111940_8	PHROG	phrog_9562	NA	unknown function
UHGV-2111940_8	UniRef90	UniRef90_A0A6N3FDD3	Pentapeptide repeats (8 copies)	NA
UHGV-2111940_8	eggNOG-mapper	1232443.BAIA02000078_gene49	Pentapeptide repeat protein	NA
UHGV-2111940_8	Pfam	PF00805	Pentapeptide repeats (8 copies)	Pentapeptide
UHGV-2111940_8	Pfam	PF19062	NA	DUF5758
UHGV-2111940_8	COG	COG1357	NA	NA
UHGV-2111940_8	Structural annotation	PF19062, PF13599, NF000139	NA	NA
UHGV-2111940_13	UniRef90	UniRef90_A0A1C6B995	Plasmid maintenance system antidote protein	NA
UHGV-2111940_13	eggNOG-mapper	411461.DORFOR_00030	Helix-turn-helix XRE-family like proteins	NA
UHGV-2111940_13	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-2111940_13	Structural annotation	PF12844, NF041951, COG1396	NA	NA
UHGV-2111940_14	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-2111940_14	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-2111940_14	UniRef90	UniRef90_UPI001921ACBC	XRE family transcriptional regulator	NA
UHGV-2111940_14	eggNOG-mapper	1408324.JNJK01000035_gene2074	Peptidase S24-like	NA
UHGV-2111940_14	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2111940_14	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-2111940_14	COG	COG2932	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	NA
UHGV-2111940_14	Structural annotation	PF00717, PF01381, MF_00015, NF041951, NF007621, COG2932	NA	NA
UHGV-2111940_15	UniRef90	UniRef90_A0A173Y4I5	HTH cro/C1-type domain-containing protein	NA
UHGV-2111940_15	eggNOG-mapper	428125.CLOLEP_02738	SMART helix-turn-helix domain protein	NA
UHGV-2111940_15	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-2111940_15	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2111940_16	PHROG	phrog_87	metallo-protease	other
UHGV-2111940_16	UniRef90	UniRef90_A0A358M3H4	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-2111940_16	eggNOG-mapper	1007096.BAGW01000011_gene2354	IrrE N-terminal-like domain	NA
UHGV-2111940_16	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-2111940_16	Structural annotation	PF06114, COG2856	NA	NA
UHGV-2111940_18	KOfam	K09524	DNAJC4; DnaJ homolog subfamily C member 4	NA
UHGV-2111940_18	PHROG	phrog_14336	NA	unknown function
UHGV-2111940_18	eggNOG-mapper	449447.MAE_10060	DnaJ-class molecular chaperone with C-terminal Zn finger domain	NA
UHGV-2111940_18	Pfam	PF00226	DnaJ domain	DnaJ
UHGV-2111940_18	COG	COG0484	DnaJ-class molecular chaperone with C-terminal Zn finger domain	NA
UHGV-2111940_19	KOfam	K14059	int; integrase	NA
UHGV-2111940_19	PHROG	phrog_1	integrase	integration and excision
UHGV-2111940_19	UniRef90	UniRef90_UPI001EDEB0AD	site-specific integrase	NA
UHGV-2111940_19	eggNOG-mapper	1226322.HMPREF1545_00144	Belongs to the 'phage' integrase family	NA
UHGV-2111940_19	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2111940_19	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2111940_19	Structural annotation	PF00589, PF12167, MF_02055, NF040815, COG4974	NA	NA
UHGV-2111940_20	KOfam	K19167	abiQ; protein AbiQ	NA
UHGV-2111940_20	PHROG	phrog_33519	NA	unknown function
UHGV-2111940_20	eggNOG-mapper	1507.HMPREF0262_01197	NA	NA
UHGV-2111940_20	Structural annotation	PF13958, NF010262, COG2337	NA	NA
UHGV-2111940_21	UniRef90	UniRef90_U2AS96	MuF_C domain-containing protein	NA
UHGV-2111940_21	eggNOG-mapper	693746.OBV_01590	NA	NA
UHGV-2111940_22	eggNOG-mapper	693746.OBV_01600	NA	NA
UHGV-2111940_23	PHROG	phrog_199	holin	lysis
UHGV-2111940_23	UniRef90	UniRef90_A0A8J6JEU7	Phage holin family protein	NA
UHGV-2111940_23	eggNOG-mapper	411467.BACCAP_00280	Bacteriophage holin family	NA
UHGV-2111940_23	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-2111940_23	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-2111940_23	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-2111940_23	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-2111940_24	KOfam	K17733	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	NA
UHGV-2111940_24	PHROG	phrog_6523	endolysin	lysis
UHGV-2111940_24	UniRef90	UniRef90_A0A8J6J9A0	M15 family metallopeptidase	NA
UHGV-2111940_24	eggNOG-mapper	742738.HMPREF9460_00364	D-alanyl-D-alanine carboxypeptidase	NA
UHGV-2111940_24	Pfam	PF13539	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
UHGV-2111940_24	COG	COG1876	LD-carboxypeptidase LdcB, LAS superfamily	NA
UHGV-2111940_24	Structural annotation	PF02557, NF000472, COG2173	NA	NA
UHGV-2111940_25	eggNOG-mapper	742738.HMPREF9460_03967	NA	NA
UHGV-2111940_28	PHROG	phrog_23208	virion structural protein	head and packaging
UHGV-2111940_28	COG	COG5295	Autotransporter adhesin	NA
UHGV-2111940_29	PHROG	phrog_3287	virion structural protein	head and packaging
UHGV-2111940_29	UniRef90	UniRef90_A0A4D7ASB8	NA	NA
UHGV-2111940_29	eggNOG-mapper	693746.OBV_01680	NA	NA
UHGV-2111940_29	Structural annotation	PF11134, MF_03027, NF010237, TIGR03511, COG2319	NA	NA
UHGV-2111940_30	eggNOG-mapper	1519439.JPJG01000011_gene57	NA	NA
UHGV-2111940_30	Structural annotation	PF11650	NA	NA
UHGV-2111940_32	PHROG	phrog_422	major head protein	head and packaging
UHGV-2111940_32	UniRef90	UniRef90_A0A8J6JH37	Chitobiase/beta-hexosaminidase C-terminal domain-containing protein	NA
UHGV-2111940_32	eggNOG-mapper	693746.OBV_01700	NA	NA
UHGV-2111940_32	Pfam	PF13290	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
UHGV-2111940_32	Structural annotation	PF19821, PF13287, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-2111940_33	eggNOG-mapper	755731.Clo1100_2435	NA	NA
UHGV-2111940_34	PHROG	phrog_156	portal protein	head and packaging
UHGV-2111940_34	eggNOG-mapper	693746.OBV_01670	NA	NA
UHGV-2111940_34	Structural annotation	PF16510, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-2111940_36	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-2111940_36	PHROG	phrog_979	terminase large subunit	head and packaging
UHGV-2111940_36	UniRef90	UniRef90_A0A1Y3RJJ5	Terminase_3 domain-containing protein	NA
UHGV-2111940_36	eggNOG-mapper	693746.OBV_01690	phage Terminase large subunit	NA
UHGV-2111940_36	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-2111940_36	COG	COG1783	Phage terminase large subunit	NA
UHGV-2111940_36	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-2111940_37	eggNOG-mapper	931276.Cspa_c57180	DNA-packaging protein gp3	NA
UHGV-2111940_37	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-2111940_37	Structural annotation	PF16677	NA	NA
UHGV-2111940_38	KOfam	K03091	sigH; RNA polymerase sporulation-specific sigma factor	NA
UHGV-2111940_38	UniRef90	UniRef90_A0A174RNL1	RNA polymerase sigma factor SigS	NA
UHGV-2111940_38	Pfam	PF04542	Sigma-70 region 2	Sigma70_r2
UHGV-2111940_38	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-2111940_38	NCBIFam	TIGR02937.1	sigma-70 family RNA polymerase sigma factor	NA
UHGV-2111940_38	COG	COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	NA
UHGV-2111940_38	Structural annotation	PF04542, PF08281, MF_00962, NF006158, COG1191	NA	NA
UHGV-2111940_41	KOfam	K15773	hipB; HTH-type transcriptional regulator / antitoxin HipB	NA
UHGV-2111940_41	UniRef90	UniRef90_A0A096DGF2	HTH cro/C1-type domain-containing protein	NA
UHGV-2111940_41	eggNOG-mapper	742738.HMPREF9460_00887	Helix-turn-helix XRE-family like proteins	NA
UHGV-2111940_41	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2111940_41	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-2111940_42	Structural annotation	PF19070	NA	NA
UHGV-2111940_46	PHROG	phrog_874	NA	unknown function
UHGV-2111940_46	eggNOG-mapper	411468.CLOSCI_00298	NA	NA
UHGV-2111940_46	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-2111940_48	PHROG	phrog_37865	NA	unknown function
UHGV-2111940_49	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-2111940_49	Structural annotation	PF04936, NF033558	NA	NA
UHGV-2111940_50	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-2111940_51	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-2111940_51	UniRef90	UniRef90_A0A6A8VJ62	NA	NA
UHGV-2111940_51	eggNOG-mapper	1226322.HMPREF1545_00295	NA	NA
UHGV-2111940_51	Pfam	PF06356	NA	DUF1064
UHGV-2111940_51	Structural annotation	PF06356	NA	NA
UHGV-2111940_52	Structural annotation	PF11417	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2111940	Yes	38,107 bps	57.94%	97.33%	0.9747
UHGV-0105747	No	22,062 bps	60.42%	55.71%	0.9783
UHGV-0117468	No	11,943 bps	59.62%	30.10%	0.9743
UHGV-1583689	No	11,943 bps	59.62%	30.10%	0.9743