vOTU-071223

Overview

vOTU representative UHGV-0194202

No. of genomes 2

Genome length 42,339 bps

Completeness 99.90% (high-quality)

Host Faecalibacterium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-071223
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00124 › vGENUS-00371 › vSUBGEN-30681 › vOTU-071223
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0194202
BioSample	SAMN09781696
Genome length	42,339 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	65
CDS density	92.03%
tRNA count	3
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0194202_1	PHROG	phrog_13845	NA	unknown function
UHGV-0194202_1	eggNOG-mapper	508419.F8J158_9CAUD	NA	NA
UHGV-0194202_1	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0194202_2	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0194202_2	UniRef90	UniRef90_A0A2A7ALT4	Terminase	NA
UHGV-0194202_2	eggNOG-mapper	610130.Closa_0741	Phage Terminase	NA
UHGV-0194202_2	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0194202_2	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0194202_2	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0194202_3	PHROG	phrog_12	portal protein	head and packaging
UHGV-0194202_3	UniRef90	UniRef90_A0A2A7B6S8	Phage portal protein	NA
UHGV-0194202_3	eggNOG-mapper	349161.Dred_2606	Phage portal protein, HK97 family	NA
UHGV-0194202_3	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0194202_3	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0194202_3	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0194202_3	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0194202_4	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0194202_4	PHROG	phrog_133	head maturation protease	head and packaging
UHGV-0194202_4	UniRef90	UniRef90_UPI001C10F40E	Clp protease ClpP	NA
UHGV-0194202_4	eggNOG-mapper	1121866.AUGK01000006_gene879	Clp protease	NA
UHGV-0194202_4	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0194202_4	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0194202_4	Structural annotation	PF00574, MF_00444, TIGR00493, COG0740	NA	NA
UHGV-0194202_5	PHROG	phrog_10	major head protein	head and packaging
UHGV-0194202_5	UniRef90	UniRef90_A0A2A7B712	Phage major capsid protein	NA
UHGV-0194202_5	eggNOG-mapper	1235792.C808_00086	Phage capsid family	NA
UHGV-0194202_5	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0194202_5	Pfam	PF12733	Cadherin-like beta sandwich domain	Cadherin-like
UHGV-0194202_5	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0194202_5	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0194202_5	Structural annotation	PF05065, PF12733, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0194202_6	PHROG	phrog_749	NA	unknown function
UHGV-0194202_6	UniRef90	UniRef90_UPI0016630012	phage gp6-like head-tail connector protein	NA
UHGV-0194202_6	eggNOG-mapper	1235792.C808_00087	NA	NA
UHGV-0194202_7	PHROG	phrog_19734	NA	unknown function
UHGV-0194202_7	eggNOG-mapper	349161.Dred_2602	NA	NA
UHGV-0194202_7	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0194202_8	eggNOG-mapper	999413.HMPREF1094_02005	NA	NA
UHGV-0194202_8	Structural annotation	PF05657, COG3167	NA	NA
UHGV-0194202_9	UniRef90	UniRef90_A0A1C6FG30	Phage protein, HK97 gp10 family	NA
UHGV-0194202_9	eggNOG-mapper	908340.HMPREF9406_2573	NA	NA
UHGV-0194202_9	Structural annotation	TIGR01725	NA	NA
UHGV-0194202_10	PHROG	phrog_88	major tail protein	tail
UHGV-0194202_10	UniRef90	UniRef90_UPI0018771F27	phage tail protein	NA
UHGV-0194202_10	eggNOG-mapper	349161.Dred_2600	NA	NA
UHGV-0194202_10	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0194202_10	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-0194202_13	PHROG	phrog_9959	tail length tape measure protein	tail
UHGV-0194202_13	UniRef90	UniRef90_A0A2A7B6K1	TMP_3 domain-containing protein	NA
UHGV-0194202_13	eggNOG-mapper	1492737.FEM08_12070	tape measure	NA
UHGV-0194202_13	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0194202_13	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0194202_13	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0194202_13	Structural annotation	PF20155, COG3941	NA	NA
UHGV-0194202_14	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0194202_14	UniRef90	UniRef90_A0A173Z1X4	Phage-related protein	NA
UHGV-0194202_14	eggNOG-mapper	439292.Bsel_2995	tail component	NA
UHGV-0194202_14	COG	COG4722	Phage-related protein YomH	NA
UHGV-0194202_14	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0194202_15	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0194202_15	UniRef90	UniRef90_A0A2A7AM44	Prophage_tail domain-containing protein	NA
UHGV-0194202_15	eggNOG-mapper	1123263.AUKY01000068_gene489	Phage minor structural protein	NA
UHGV-0194202_15	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0194202_15	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0194202_15	COG	COG4926	Phage-related protein	NA
UHGV-0194202_15	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0194202_17	PHROG	phrog_7158	NA	unknown function
UHGV-0194202_17	eggNOG-mapper	862514.HMPREF0623_0302	Calcineurin-like phosphoesterase	NA
UHGV-0194202_17	Pfam	PF00149	Calcineurin-like phosphoesterase	Metallophos
UHGV-0194202_17	Structural annotation	PF10651, PF12850, MF_00905, NF008359, NF038186, COG1409	NA	NA
UHGV-0194202_18	KOfam	K08131	COL9A; collagen type IX alpha	NA
UHGV-0194202_18	PHROG	phrog_5073	tail fiber protein	tail
UHGV-0194202_18	eggNOG-mapper	411483.FAEPRAA2165_00757	NA	NA
UHGV-0194202_18	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0194202_19	UniRef90	UniRef90_UPI001CBA7B78	glycoside hydrolase family 55 protein	NA
UHGV-0194202_19	Pfam	PF12708	Pectate lyase superfamily protein	Pectate_lyase_3
UHGV-0194202_19	Structural annotation	PF00295, NF041900, COG5434	NA	NA
UHGV-0194202_20	KOfam	K07273	acm; lysozyme	NA
UHGV-0194202_20	PHROG	phrog_291	endolysin	lysis
UHGV-0194202_20	UniRef90	UniRef90_UPI001D0EE7D8	glycoside hydrolase family 25 protein	NA
UHGV-0194202_20	eggNOG-mapper	748224.HMPREF9436_00154	hydrolase, family 25	NA
UHGV-0194202_20	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0194202_20	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0194202_20	Structural annotation	PF01183, COG3757	NA	NA
UHGV-0194202_21	PHROG	phrog_1863	NA	unknown function
UHGV-0194202_21	eggNOG-mapper	718252.FP2_04900	NA	NA
UHGV-0194202_22	PHROG	phrog_15303	NA	unknown function
UHGV-0194202_24	Structural annotation	PF07374, MF_00245, NF001072, COG2739	NA	NA
UHGV-0194202_26	UniRef90	UniRef90_A0A1Q9JGI6	RHH_1 domain-containing protein	NA
UHGV-0194202_26	eggNOG-mapper	1033733.CAEK01000007_gene1628	NA	NA
UHGV-0194202_26	Structural annotation	PF03869, NF041793, COG4691	NA	NA
UHGV-0194202_31	PHROG	phrog_16490	NA	unknown function
UHGV-0194202_31	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-0194202_32	eggNOG-mapper	658655.HMPREF0988_00916	NA	NA
UHGV-0194202_33	eggNOG-mapper	1408437.JNJN01000043_gene801	NA	NA
UHGV-0194202_34	KOfam	K14059	int; integrase	NA
UHGV-0194202_34	PHROG	phrog_1	integrase	integration and excision
UHGV-0194202_34	UniRef90	UniRef90_A0A367GI93	Tyr recombinase domain-containing protein	NA
UHGV-0194202_34	eggNOG-mapper	1507.HMPREF0262_00307	Phage integrase family	NA
UHGV-0194202_34	Pfam	PF02899	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_1
UHGV-0194202_34	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0194202_34	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0194202_34	Structural annotation	PF00589, PF13102, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0194202_35	PHROG	phrog_1373	transcriptional regulator	transcription regulation
UHGV-0194202_35	UniRef90	UniRef90_A0A2A7B6N3	HTH cro/C1-type domain-containing protein	NA
UHGV-0194202_35	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0194202_35	Structural annotation	PF13560, MF_00535, NF041951, COG1476	NA	NA
UHGV-0194202_38	PHROG	phrog_888	NA	unknown function
UHGV-0194202_38	UniRef90	UniRef90_A0A6N7TMA2	SHOCT domain-containing protein	NA
UHGV-0194202_38	eggNOG-mapper	1415774.U728_165	Short C-terminal domain	NA
UHGV-0194202_38	Pfam	PF14471	NA	DUF4428
UHGV-0194202_38	Pfam	PF09851	Short C-terminal domain	SHOCT
UHGV-0194202_38	Structural annotation	PF15947, PF14471	NA	NA
UHGV-0194202_39	Structural annotation	PF06776, COG5342	NA	NA
UHGV-0194202_42	Structural annotation	PF21441, TIGR04176, COG1846	NA	NA
UHGV-0194202_43	UniRef90	UniRef90_A0A2A7AM72	HTH cro/C1-type domain-containing protein	NA
UHGV-0194202_43	eggNOG-mapper	1378168.N510_01712	NA	NA
UHGV-0194202_43	Structural annotation	PF12844, MF_00535, NF041951, COG3655	NA	NA
UHGV-0194202_44	UniRef90	UniRef90_UPI000BEF0F65	helix-turn-helix transcriptional regulator	NA
UHGV-0194202_44	Structural annotation	PF21291, TIGR03070, COG1476	NA	NA
UHGV-0194202_52	COG	COG4712	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	NA
UHGV-0194202_52	Structural annotation	PF04098, TIGR00607, COG4712	NA	NA
UHGV-0194202_53	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0194202_53	eggNOG-mapper	411471.SUBVAR_05829	NA	NA
UHGV-0194202_53	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0194202_54	Pfam	PF04448	NA	DUF551
UHGV-0194202_54	Structural annotation	NF041588	NA	NA
UHGV-0194202_55	PHROG	phrog_7566	NA	unknown function
UHGV-0194202_55	eggNOG-mapper	411471.SUBVAR_05830	NA	NA
UHGV-0194202_56	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0194202_56	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0194202_56	UniRef90	UniRef90_A0A2A7B6R5	Single-stranded DNA-binding protein	NA
UHGV-0194202_56	eggNOG-mapper	748224.HMPREF9436_00638	Single-stranded DNA-binding protein	NA
UHGV-0194202_56	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0194202_56	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0194202_56	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0194202_56	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0194202_56	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-0194202_57	PHROG	phrog_6969	NA	unknown function
UHGV-0194202_57	eggNOG-mapper	1232446.BAIE02000002_gene816	NA	NA
UHGV-0194202_57	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0194202_57	Structural annotation	PF04182, MF_01819, TIGR04176, COG5625	NA	NA
UHGV-0194202_58	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-0194202_58	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0194202_58	UniRef90	UniRef90_A0A2A7B6H3	AAA_31 domain-containing protein	NA
UHGV-0194202_58	eggNOG-mapper	411471.SUBVAR_05839	AAA domain	NA
UHGV-0194202_58	Pfam	PF13614	AAA domain	AAA_31
UHGV-0194202_58	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-0194202_58	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-0194202_59	Structural annotation	PF20331, COG5264	NA	NA
UHGV-0194202_60	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0194202_60	PHROG	phrog_4715	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0194202_60	UniRef90	UniRef90_A0A2A7B6Q0	ParB domain-containing protein	NA
UHGV-0194202_60	eggNOG-mapper	411471.SUBVAR_05842	ParB-like nuclease domain	NA
UHGV-0194202_60	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0194202_60	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0194202_60	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-0194202_61	Structural annotation	PF04545	NA	NA
UHGV-0194202_65	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0194202_65	UniRef90	UniRef90_A0A2A7B6I3	HNH domain-containing protein	NA
UHGV-0194202_65	eggNOG-mapper	610130.Closa_0739	HNH nucleases	NA
UHGV-0194202_65	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0194202_65	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0194202	Yes	42,339 bps	54.28%	99.90%	0.9779
UHGV-0177605	No	42,370 bps	54.27%	99.90%	0.9791