vOTU-071567

Overview

vOTU representative UHGV-1956990

No. of genomes 10

Genome length 12,274 bps

Completeness 99.90% (high-quality)

Host Unclassified

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-071567
Number of genomes	10
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00012 › vSUBFAM-00988 › vGENUS-00900 › vSUBGEN-00434 › vOTU-071567
Host taxonomy
Host range breadth
Host prediction method
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1956990
BioSample	NA
Genome length	12,274 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	16
CDS density	95.21%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1956990_1	KOfam	K07273	acm; lysozyme	NA
UHGV-1956990_1	PHROG	phrog_291	endolysin	lysis
UHGV-1956990_1	UniRef90	UniRef90_A0A3R6JQ14	1,4-beta-N-acetylmuramidase	NA
UHGV-1956990_1	eggNOG-mapper	411470.RUMGNA_00451	COG COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	NA
UHGV-1956990_1	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-1956990_1	Pfam	PF00404	Dockerin type I domain	Dockerin_1
UHGV-1956990_1	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-1956990_1	Structural annotation	PF01183, MF_02227, NF002576, COG3757	NA	NA
UHGV-1956990_4	Structural annotation	PF21703, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1956990_5	Structural annotation	PF20934	NA	NA
UHGV-1956990_6	PHROG	phrog_2038	upper collar connector	connector
UHGV-1956990_6	UniRef90	UniRef90_A0A2Z4GUB7	Upper collar protein	NA
UHGV-1956990_6	eggNOG-mapper	10753.B7SSN1_BPNF	Phage Connector (GP10)	NA
UHGV-1956990_6	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-1956990_6	Structural annotation	PF05352, TIGR01538, COG4695	NA	NA
UHGV-1956990_9	Structural annotation	PF00436, MF_00984, NF005242, COG0629	NA	NA
UHGV-1956990_11	PHROG	phrog_2150	terminase	head and packaging
UHGV-1956990_11	UniRef90	UniRef90_A0A843GEL8	Phage DNA encapsidation protein	NA
UHGV-1956990_11	eggNOG-mapper	10753.B7SSN7_BPNF	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-1956990_11	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-1956990_11	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1956990_12	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-1956990_12	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1956990_12	UniRef90	UniRef90_A0A316S5V3	DNA-directed DNA polymerase	NA
UHGV-1956990_12	eggNOG-mapper	338473.A6XAD2_9CAUD	nucleotide binding	NA
UHGV-1956990_12	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-1956990_12	Structural annotation	PF03175, MF_04055, NF004417, COG0417	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1956990	Yes	12,274 bps	36.57%	99.90%	0.9787
UHGV-1985342	No	12,222 bps	36.63%	99.90%	0.9773
UHGV-0047165	No	12,262 bps	36.64%	89.90%	0.9785
UHGV-0086950	No	11,882 bps	37.02%	87.11%	0.9794
UHGV-1548991	No	11,243 bps	36.68%	82.43%	0.9775
UHGV-1549552	No	11,162 bps	36.68%	81.76%	0.9778
UHGV-1549551	No	11,158 bps	36.67%	81.73%	0.9777
UHGV-1512049	No	10,841 bps	37.03%	79.48%	0.9792
UHGV-1507704	No	10,642 bps	36.75%	77.95%	0.9784
UHGV-1507702	No	10,615 bps	37.17%	77.75%	0.9775