vOTU-072139

Overview

vOTU representative UHGV-2044769

No. of genomes 3

Genome length 35,780 bps

Completeness 94.97% (high-quality)

Host Sellimonas intestinalis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-072139
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-01615 › vGENUS-08548 › vSUBGEN-08626 › vOTU-072139
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Sellimonas › Sellimonas intestinalis
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2044769
BioSample	SAMN05971486
Genome length	35,780 bps
CheckV completeness	94.97% (high-quality)
CheckV contamination	0.00%
CDS count	66
CDS density	89.76%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2044769_1	eggNOG-mapper	1232452.BAIB02000007_gene1606	NA	NA
UHGV-2044769_2	NCBIFam	NF040910.1	CD1375 family protein	NA
UHGV-2044769_2	Structural annotation	NF040910	NA	NA
UHGV-2044769_3	eggNOG-mapper	1232452.BAIB02000007_gene1607	NA	NA
UHGV-2044769_5	KOfam	K19721	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	NA
UHGV-2044769_5	PHROG	phrog_819	tail protein	tail
UHGV-2044769_5	UniRef90	UniRef90_UPI0006B14F6F	collagen-like protein	NA
UHGV-2044769_5	eggNOG-mapper	1232452.BAIB02000007_gene1608	Collagen triple helix repeat	NA
UHGV-2044769_5	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-2044769_5	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-2044769_6	KOfam	K19719	COL2A; collagen type II alpha	NA
UHGV-2044769_6	PHROG	phrog_819	tail protein	tail
UHGV-2044769_6	UniRef90	UniRef90_UPI00196B7043	collagen-like protein	NA
UHGV-2044769_6	eggNOG-mapper	1232452.BAIB02000007_gene1609	Collagen triple helix repeat (20 copies)	NA
UHGV-2044769_6	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-2044769_6	COG	COG3266	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	NA
UHGV-2044769_7	UniRef90	UniRef90_UPI001A9BB450	collagen-like protein	NA
UHGV-2044769_7	eggNOG-mapper	1232452.BAIB02000007_gene1610	NA	NA
UHGV-2044769_8	PHROG	phrog_19695	NA	unknown function
UHGV-2044769_8	eggNOG-mapper	1232452.BAIB02000007_gene1611	NA	NA
UHGV-2044769_8	Structural annotation	PF19714	NA	NA
UHGV-2044769_9	PHROG	phrog_819	tail protein	tail
UHGV-2044769_9	UniRef90	UniRef90_UPI000D7A7A43	collagen-like protein	NA
UHGV-2044769_9	eggNOG-mapper	290402.Cbei_3387	NA	NA
UHGV-2044769_9	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-2044769_10	PHROG	phrog_14030	NA	unknown function
UHGV-2044769_10	UniRef90	UniRef90_A0A3E3JYD3	Peptidase M23	NA
UHGV-2044769_10	eggNOG-mapper	1232452.BAIB02000007_gene1613	NlpC/P60 family	NA
UHGV-2044769_10	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-2044769_10	Pfam	PF05382	Bacteriophage peptidoglycan hydrolase	Amidase_5
UHGV-2044769_10	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-2044769_10	Structural annotation	PF18013, PF05382, NF033742, COG0791	NA	NA
UHGV-2044769_11	PHROG	phrog_13289	tail protein	tail
UHGV-2044769_11	UniRef90	UniRef90_A0A3E3JY67	Prophage_tail domain-containing protein	NA
UHGV-2044769_11	eggNOG-mapper	1232452.BAIB02000007_gene1614	Prophage endopeptidase tail	NA
UHGV-2044769_11	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-2044769_11	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-2044769_11	COG	COG4926	Phage-related protein	NA
UHGV-2044769_11	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-2044769_12	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-2044769_12	UniRef90	UniRef90_A0A844KEE5	Phage tail protein	NA
UHGV-2044769_12	eggNOG-mapper	1232452.BAIB02000007_gene1615	phage tail	NA
UHGV-2044769_12	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-2044769_12	COG	COG4722	Phage-related protein YomH	NA
UHGV-2044769_12	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-2044769_13	PHROG	phrog_23464	NA	unknown function
UHGV-2044769_13	UniRef90	UniRef90_A0A373N7M8	PhageMin_Tail domain-containing protein	NA
UHGV-2044769_13	eggNOG-mapper	1232452.BAIB02000007_gene1616	phage tail tape measure protein	NA
UHGV-2044769_13	COG	COG5280	Phage-related minor tail protein	NA
UHGV-2044769_16	PHROG	phrog_88	major tail protein	tail
UHGV-2044769_16	UniRef90	UniRef90_A0A3E3JYD8	Phage tail protein	NA
UHGV-2044769_16	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-2044769_16	COG	COG5492	NA	NA
UHGV-2044769_16	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-2044769_17	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-2044769_17	UniRef90	UniRef90_D4M595	Phage protein, HK97 gp10 family	NA
UHGV-2044769_18	PHROG	phrog_78	tail terminator	connector
UHGV-2044769_18	Structural annotation	PF05657	NA	NA
UHGV-2044769_19	UniRef90	UniRef90_A0A844KCF4	Phage head closure protein	NA
UHGV-2044769_19	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2044769_21	PHROG	phrog_31690	NA	unknown function
UHGV-2044769_21	eggNOG-mapper	1232452.BAIB02000007_gene1624	NA	NA
UHGV-2044769_22	PHROG	phrog_10	major head protein	head and packaging
UHGV-2044769_22	UniRef90	UniRef90_A0A3E3JY53	Phage major capsid protein	NA
UHGV-2044769_22	eggNOG-mapper	1232452.BAIB02000007_gene1625	Phage capsid family	NA
UHGV-2044769_22	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2044769_22	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2044769_22	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2044769_22	Structural annotation	PF05065, TIGR01554, COG4653	NA	NA
UHGV-2044769_23	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-2044769_23	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-2044769_23	UniRef90	UniRef90_A0A3E3JYT5	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-2044769_23	eggNOG-mapper	1232452.BAIB02000007_gene1626	Belongs to the peptidase S14 family	NA
UHGV-2044769_23	Pfam	PF00574	Clp protease	CLP_protease
UHGV-2044769_23	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-2044769_23	Structural annotation	PF00574, MF_00444, TIGR00493, COG0740	NA	NA
UHGV-2044769_24	PHROG	phrog_12	portal protein	head and packaging
UHGV-2044769_24	UniRef90	UniRef90_A0A3E3JY21	Phage portal protein	NA
UHGV-2044769_24	eggNOG-mapper	1232452.BAIB02000007_gene1627	Phage portal protein, HK97 family	NA
UHGV-2044769_24	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2044769_24	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2044769_24	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2044769_25	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2044769_25	UniRef90	UniRef90_A0A3E3JY25	Terminase large subunit	NA
UHGV-2044769_25	eggNOG-mapper	1232452.BAIB02000007_gene1629	Phage terminase-like protein large subunit	NA
UHGV-2044769_25	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2044769_25	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2044769_25	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2044769_25	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-2044769_26	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-2044769_26	UniRef90	UniRef90_A0A1C5LZF0	Phage terminase, small subunit	NA
UHGV-2044769_26	eggNOG-mapper	349161.Dred_2608	NA	NA
UHGV-2044769_26	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-2044769_26	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-2044769_27	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-2044769_27	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2044769_27	UniRef90	UniRef90_A0A3E3JY08	HNH endonuclease	NA
UHGV-2044769_27	eggNOG-mapper	1232452.BAIB02000007_gene1631	HNH nucleases	NA
UHGV-2044769_27	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2044769_27	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2044769_28	KOfam	K18843	hicB; antitoxin HicB	NA
UHGV-2044769_28	PHROG	phrog_497	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UHGV-2044769_28	UniRef90	UniRef90_A0A3E3JXV7	HicB family protein	NA
UHGV-2044769_28	eggNOG-mapper	397287.C807_02051	HicB_like antitoxin of bacterial toxin-antitoxin system	NA
UHGV-2044769_28	Pfam	PF15919	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
UHGV-2044769_28	COG	COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	NA
UHGV-2044769_28	Structural annotation	PF15919, COG1598	NA	NA
UHGV-2044769_29	KOfam	K07339	hicA; mRNA interferase HicA [EC:3.1.-.-]	NA
UHGV-2044769_29	PHROG	phrog_353	toxin	moron, auxiliary metabolic gene and host takeover
UHGV-2044769_29	UniRef90	UniRef90_A0A3E3JXV9	Type II toxin-antitoxin system HicA family toxin	NA
UHGV-2044769_29	eggNOG-mapper	397287.C807_02050	HicA toxin of bacterial toxin-antitoxin,	NA
UHGV-2044769_29	Pfam	PF07927	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
UHGV-2044769_29	COG	COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	NA
UHGV-2044769_29	Structural annotation	PF07927, COG1724	NA	NA
UHGV-2044769_30	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-2044769_30	UniRef90	UniRef90_A0A3R5X3C8	NA	NA
UHGV-2044769_30	eggNOG-mapper	411461.DORFOR_00754	sigma factor activity	NA
UHGV-2044769_30	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-2044769_30	Structural annotation	PF07374, MF_00674, NF007227, COG1342	NA	NA
UHGV-2044769_32	PHROG	phrog_15198	NA	unknown function
UHGV-2044769_34	UniRef90	UniRef90_S2YRM1	NA	NA
UHGV-2044769_38	PHROG	phrog_16351	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2044769_38	UniRef90	UniRef90_A0A894KBW2	LexA_DNA_bind domain-containing protein	NA
UHGV-2044769_38	eggNOG-mapper	742723.HMPREF9477_00922	NA	NA
UHGV-2044769_39	Structural annotation	PF00601	NA	NA
UHGV-2044769_42	PHROG	phrog_10980	NA	unknown function
UHGV-2044769_43	PHROG	phrog_11000	NA	unknown function
UHGV-2044769_43	Structural annotation	PF18103	NA	NA
UHGV-2044769_45	PHROG	phrog_7964	NA	unknown function
UHGV-2044769_45	UniRef90	UniRef90_A0A174CB23	Predicted acyltransferase	NA
UHGV-2044769_45	eggNOG-mapper	411470.RUMGNA_02189	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	NA
UHGV-2044769_45	Pfam	PF18836	YdcK Beta solenoid repeat	B_solenoid_ydck
UHGV-2044769_45	COG	COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA
UHGV-2044769_45	Structural annotation	NF040481	NA	NA
UHGV-2044769_46	PHROG	phrog_428	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2044769_46	UniRef90	UniRef90_UPI000B1808B0	conserved phage C-terminal domain-containing protein	NA
UHGV-2044769_46	eggNOG-mapper	457396.CSBG_01034	Conserved phage C-terminus (Phg_2220_C)	NA
UHGV-2044769_46	Pfam	PF19808	NA	DUF6291
UHGV-2044769_46	Pfam	PF09524	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
UHGV-2044769_46	NCBIFam	TIGR02220.1	phage conserved hypothetical protein, C-terminal domain	NA
UHGV-2044769_46	COG	COG1846	DNA-binding transcriptional regulator, MarR family	NA
UHGV-2044769_46	Structural annotation	PF09524, PF19808, TIGR02220	NA	NA
UHGV-2044769_47	UniRef90	UniRef90_A0A357NGS2	HTH_11 domain-containing protein	NA
UHGV-2044769_48	PHROG	phrog_1682	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-2044769_48	UniRef90	UniRef90_A0A0F0CCS0	Endodeoxyribonuclease RusA	NA
UHGV-2044769_48	eggNOG-mapper	742733.HMPREF9469_01846	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	NA
UHGV-2044769_48	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-2044769_48	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-2044769_49	PHROG	phrog_7566	NA	unknown function
UHGV-2044769_49	UniRef90	UniRef90_A0A373CFM5	ClpX-type ZB domain-containing protein	NA
UHGV-2044769_49	eggNOG-mapper	742733.HMPREF9469_01847	NA	NA
UHGV-2044769_50	PHROG	phrog_1227	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-2044769_50	UniRef90	UniRef90_A0A3E3JY66	NA	NA
UHGV-2044769_50	eggNOG-mapper	33035.JPJF01000071_gene4463	NA	NA
UHGV-2044769_50	Pfam	PF12684	NA	DUF3799
UHGV-2044769_50	COG	COG1074	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	NA
UHGV-2044769_50	Structural annotation	PF12684, TIGR01896, COG4343	NA	NA
UHGV-2044769_51	PHROG	phrog_561	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-2044769_51	UniRef90	UniRef90_UPI0011C8A287	recombinase RecT	NA
UHGV-2044769_51	eggNOG-mapper	33035.JPJF01000071_gene4462	NA	NA
UHGV-2044769_51	Pfam	PF03837	RecT family	RecT
UHGV-2044769_51	Structural annotation	TIGR01913, COG3723	NA	NA
UHGV-2044769_52	PHROG	phrog_1499	NA	unknown function
UHGV-2044769_52	UniRef90	UniRef90_A0A2N5P5I0	AAA_23 domain-containing protein	NA
UHGV-2044769_52	eggNOG-mapper	742733.HMPREF9469_01850	DNA recombination	NA
UHGV-2044769_52	COG	COG0497	DNA repair ATPase RecN	NA
UHGV-2044769_52	Structural annotation	PF11398, MF_00365, NF008121, COG0497	NA	NA
UHGV-2044769_53	Structural annotation	PF18822	NA	NA
UHGV-2044769_56	eggNOG-mapper	596152.DesU5LDRAFT_1910	NA	NA
UHGV-2044769_56	Structural annotation	PF03787, TIGR02581, COG1604	NA	NA
UHGV-2044769_59	PHROG	phrog_14088	NA	unknown function
UHGV-2044769_59	UniRef90	UniRef90_A0A3E2WV70	Carboxypeptidase	NA
UHGV-2044769_59	eggNOG-mapper	1256908.HMPREF0373_00648	NA	NA
UHGV-2044769_61	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-2044769_61	UniRef90	UniRef90_UPI001C3A24EB	Helix-turn-helix domain-containing protein	NA
UHGV-2044769_61	eggNOG-mapper	476272.RUMHYD_03617	Cro/C1-type HTH DNA-binding domain	NA
UHGV-2044769_61	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2044769_61	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2044769_61	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-2044769_62	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2044769_62	UniRef90	UniRef90_A0A6I3QFI4	XRE family transcriptional regulator	NA
UHGV-2044769_62	eggNOG-mapper	1235802.C823_04750	Helix-turn-helix XRE-family like proteins	NA
UHGV-2044769_62	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2044769_62	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-2044769_63	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2044769_63	UniRef90	UniRef90_A0A6I3QE91	Helix-turn-helix domain-containing protein	NA
UHGV-2044769_63	eggNOG-mapper	742740.HMPREF9474_02604	sequence-specific DNA binding	NA
UHGV-2044769_63	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-2044769_63	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2044769_63	Structural annotation	PF12844, MF_00535, NF041951, COG1396	NA	NA
UHGV-2044769_64	PHROG	phrog_20886	NA	unknown function
UHGV-2044769_64	eggNOG-mapper	1235798.C817_00619	NA	NA
UHGV-2044769_64	Structural annotation	PF06114	NA	NA
UHGV-2044769_65	KOfam	K07504	K07504; predicted type IV restriction endonuclease	NA
UHGV-2044769_65	PHROG	phrog_4225	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2044769_65	UniRef90	UniRef90_A0A3E3JYB7	Endonuclease	NA
UHGV-2044769_65	eggNOG-mapper	411462.DORLON_00821	Type I restriction enzyme R protein N terminus (HSDR_N)	NA
UHGV-2044769_65	Pfam	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)	HSDR_N
UHGV-2044769_65	COG	COG4748	NA	NA
UHGV-2044769_65	Structural annotation	PF13588, TIGR04256, COG4748	NA	NA
UHGV-2044769_66	UniRef90	UniRef90_UPI001C0BFF51	LITAF-like zinc ribbon domain-containing protein	NA
UHGV-2044769_66	eggNOG-mapper	218140.BPSY_1280	NA	NA
UHGV-2044769_66	Pfam	PF01096	Transcription factor S-II (TFIIS)	TFIIS_C
UHGV-2044769_66	Structural annotation	TIGR04165, COG3478	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2044769	Yes	35,780 bps	41.61%	94.97%	0.9803
UHGV-0153717	No	15,040 bps	39.53%	30.60%	0.9716
UHGV-2048808	No	14,759 bps	40.58%	29.75%	0.9769