vOTU-074346

Overview

vOTU representative UHGV-0195598

No. of genomes 1

Genome length 37,024 bps

Completeness 94.34% (high-quality)

Host Clostridium P perfringens

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-074346
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00026 › vSUBFAM-02485 › vGENUS-16765 › vSUBGEN-30551 › vOTU-074346
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Clostridiales › Clostridiaceae › Clostridium P › Clostridium P perfringens
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0195598
BioSample	SAMN01774328
Genome length	37,024 bps
CheckV completeness	94.34% (high-quality)
CheckV contamination	0.00%
CDS count	55
CDS density	88.63%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0195598_3	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0195598_3	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0195598_3	UniRef90	UniRef90_UPI000D7182A6	helix-turn-helix transcriptional regulator	NA
UHGV-0195598_3	eggNOG-mapper	1443125.Z962_p0007	Helix-turn-helix XRE-family like proteins	NA
UHGV-0195598_3	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0195598_3	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0195598_3	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0195598_4	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0195598_4	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0195598_4	UniRef90	UniRef90_UPI000E14BE67	helix-turn-helix transcriptional regulator	NA
UHGV-0195598_4	eggNOG-mapper	1443125.Z962_p0008	Helix-turn-helix	NA
UHGV-0195598_4	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0195598_4	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0195598_4	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0195598_5	PHROG	phrog_7735	excisionase	integration and excision
UHGV-0195598_5	UniRef90	UniRef90_UPI0018E3FD53	histidine kinase	NA
UHGV-0195598_5	eggNOG-mapper	445335.CBN_1350	NA	NA
UHGV-0195598_5	Structural annotation	PF21531, NF033787, COG3311	NA	NA
UHGV-0195598_8	PHROG	phrog_7882	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0195598_8	UniRef90	UniRef90_UPI0018E40F65	helix-turn-helix domain-containing protein	NA
UHGV-0195598_8	eggNOG-mapper	1033738.CAEP01000047_gene552	Helix-turn-helix domain	NA
UHGV-0195598_8	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0195598_8	COG	COG0640	DNA-binding transcriptional regulator, ArsR family	NA
UHGV-0195598_8	Structural annotation	PF07106, MF_01177, NF040642, COG0640	NA	NA
UHGV-0195598_11	PHROG	phrog_323	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0195598_11	UniRef90	UniRef90_UPI0018970050	helix-turn-helix domain-containing protein	NA
UHGV-0195598_11	eggNOG-mapper	86416.Clopa_2524	SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains	NA
UHGV-0195598_11	dbAPIS	APIS006	Trigger programmed cell death (PCD) by P4 prophage.	NA
UHGV-0195598_11	Structural annotation	PF01710, NF040595, COG5147	NA	NA
UHGV-0195598_14	PHROG	phrog_17842	NA	unknown function
UHGV-0195598_16	eggNOG-mapper	999411.HMPREF1092_03351	NA	NA
UHGV-0195598_17	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0195598_17	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0195598_17	UniRef90	UniRef90_UPI001CCFAB81	phage antirepressor KilAC domain-containing protein	NA
UHGV-0195598_17	eggNOG-mapper	1415775.U729_2580	BRO family, N-terminal domain	NA
UHGV-0195598_17	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0195598_17	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0195598_17	COG	COG3617	Prophage antirepressor	NA
UHGV-0195598_17	Structural annotation	PF03374, PF02498, TIGR02681, COG3645	NA	NA
UHGV-0195598_18	Pfam	PF09388	Spo0E like sporulation regulatory protein	SpoOE-like
UHGV-0195598_18	Structural annotation	PF09388	NA	NA
UHGV-0195598_19	PHROG	phrog_248	transcriptional activator	transcription regulation
UHGV-0195598_19	UniRef90	UniRef90_UPI0018E40616	NA	NA
UHGV-0195598_19	eggNOG-mapper	536232.CLM_1650	NA	NA
UHGV-0195598_19	Pfam	PF07374	NA	DUF1492
UHGV-0195598_19	Structural annotation	PF08281, MF_00674, TIGR01636, COG1191	NA	NA
UHGV-0195598_21	eggNOG-mapper	457396.CSBG_01041	NA	NA
UHGV-0195598_22	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-0195598_22	PHROG	phrog_216	integrase	integration and excision
UHGV-0195598_22	UniRef90	UniRef90_UPI0013E31E5C	tyrosine-type recombinase/integrase	NA
UHGV-0195598_22	eggNOG-mapper	457396.CSBG_01042	Phage integrase family	NA
UHGV-0195598_22	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0195598_22	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0195598_22	Structural annotation	PF00589, MF_01807, NF040815, COG4974	NA	NA
UHGV-0195598_23	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-0195598_23	UniRef90	UniRef90_UPI001E3AD56B	Xaa-His dipeptidase	NA
UHGV-0195598_23	eggNOG-mapper	1414720.CBYM010000001_gene693	NA	NA
UHGV-0195598_23	Structural annotation	PF07141	NA	NA
UHGV-0195598_24	PHROG	phrog_17021	NA	unknown function
UHGV-0195598_24	Structural annotation	PF14282	NA	NA
UHGV-0195598_26	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0195598_26	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0195598_26	UniRef90	UniRef90_UPI001CCACACA	HNH endonuclease	NA
UHGV-0195598_26	eggNOG-mapper	1414720.CBYM010000002_gene577	HNH nucleases	NA
UHGV-0195598_27	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0195598_27	UniRef90	UniRef90_UPI0003FBB63C	P27 family phage terminase small subunit	NA
UHGV-0195598_27	eggNOG-mapper	632245.CLP_2921	phage terminase small subunit	NA
UHGV-0195598_27	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0195598_27	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0195598_27	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0195598_28	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0195598_28	UniRef90	UniRef90_UPI001C85791E	terminase large subunit	NA
UHGV-0195598_28	eggNOG-mapper	1414720.CBYM010000001_gene696	Terminase	NA
UHGV-0195598_28	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0195598_28	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0195598_28	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0195598_28	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0195598_29	PHROG	phrog_12	portal protein	head and packaging
UHGV-0195598_29	UniRef90	UniRef90_UPI0018E4C584	phage portal protein	NA
UHGV-0195598_29	eggNOG-mapper	1414720.CBYM010000001_gene697	Phage portal protein, HK97 family	NA
UHGV-0195598_29	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0195598_29	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0195598_29	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0195598_29	Structural annotation	PF04860, PF08184, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0195598_30	KOfam	K06904	NA	NA
UHGV-0195598_30	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0195598_30	UniRef90	UniRef90_UPI000E18C982	HK97 family phage prohead protease	NA
UHGV-0195598_30	eggNOG-mapper	1414720.CBYM010000001_gene698	Phage prohead protease, HK97 family	NA
UHGV-0195598_30	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0195598_30	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0195598_30	COG	COG3740	Phage head maturation protease	NA
UHGV-0195598_30	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0195598_31	PHROG	phrog_10	major head protein	head and packaging
UHGV-0195598_31	UniRef90	UniRef90_UPI00070848B6	phage major capsid protein	NA
UHGV-0195598_31	eggNOG-mapper	632245.CLP_2694	Phage major capsid protein, HK97 family	NA
UHGV-0195598_31	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0195598_31	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0195598_31	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0195598_31	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0195598_32	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-0195598_32	UniRef90	UniRef90_UPI00040FE5EE	head-tail connector protein	NA
UHGV-0195598_32	eggNOG-mapper	632245.CLP_2916	Phage gp6-like head-tail connector protein	NA
UHGV-0195598_32	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0195598_32	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0195598_32	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0195598_33	PHROG	phrog_25	head closure Hc1	connector
UHGV-0195598_33	UniRef90	UniRef90_UPI00040FFAEF	phage head closure protein	NA
UHGV-0195598_33	eggNOG-mapper	632245.CLP_2692	Phage head-tail joining protein	NA
UHGV-0195598_33	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0195598_33	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0195598_33	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0195598_34	UniRef90	UniRef90_UPI0003F9E7B1	HK97 gp10 family phage protein	NA
UHGV-0195598_34	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0195598_34	Structural annotation	TIGR01725	NA	NA
UHGV-0195598_35	eggNOG-mapper	536233.CLO_1367	NA	NA
UHGV-0195598_35	Structural annotation	PF05657	NA	NA
UHGV-0195598_37	PHROG	phrog_88	major tail protein	tail
UHGV-0195598_37	eggNOG-mapper	1414720.CBYM010000049_gene117	phage major tail protein, phi13 family	NA
UHGV-0195598_37	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0195598_38	eggNOG-mapper	632245.CLP_2688	NA	NA
UHGV-0195598_38	Structural annotation	PF11836	NA	NA
UHGV-0195598_39	KOfam	K22804	SMC6; structural maintenance of chromosomes protein 6	NA
UHGV-0195598_39	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-0195598_39	UniRef90	UniRef90_A0A6M1WC39	Phage tail tape measure protein	NA
UHGV-0195598_39	eggNOG-mapper	573061.Clocel_3533	tail tape measure protein	NA
UHGV-0195598_39	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0195598_39	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0195598_39	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0195598_39	Structural annotation	PF10145, PF05384, TIGR01760, TIGR02559, COG5280	NA	NA
UHGV-0195598_40	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0195598_40	UniRef90	UniRef90_UPI0018E4830D	phage tail family protein	NA
UHGV-0195598_40	eggNOG-mapper	999411.HMPREF1092_03310	NA	NA
UHGV-0195598_40	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0195598_40	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-0195598_40	COG	COG4722	Phage-related protein YomH	NA
UHGV-0195598_40	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0195598_41	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0195598_41	UniRef90	UniRef90_UPI001C865AC2	phage tail protein	NA
UHGV-0195598_41	eggNOG-mapper	999411.HMPREF1092_03309	Prophage endopeptidase tail	NA
UHGV-0195598_41	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0195598_41	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0195598_41	COG	COG4926	Phage-related protein	NA
UHGV-0195598_41	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0195598_42	KOfam	K02238	comEC; competence protein ComEC	NA
UHGV-0195598_42	PHROG	phrog_27548	NA	unknown function
UHGV-0195598_42	UniRef90	UniRef90_A0A6M1WBI1	MBL fold metallo-hydrolase	NA
UHGV-0195598_42	eggNOG-mapper	195103.CPF_1573	competence protein COMEC	NA
UHGV-0195598_42	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0195598_42	Pfam	PF00753	Metallo-beta-lactamase superfamily	Lactamase_B
UHGV-0195598_42	COG	COG2333	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	NA
UHGV-0195598_43	PHROG	phrog_23208	virion structural protein	head and packaging
UHGV-0195598_43	UniRef90	UniRef90_B6CXE5	Pre-neck/exonuclease	NA
UHGV-0195598_43	eggNOG-mapper	536233.CLO_1580	NA	NA
UHGV-0195598_43	Structural annotation	PF10651, PF01105	NA	NA
UHGV-0195598_44	PHROG	phrog_199	holin	lysis
UHGV-0195598_44	UniRef90	UniRef90_UPI0018E47BD0	phage holin family protein	NA
UHGV-0195598_44	eggNOG-mapper	1415774.U728_3791	Bacteriophage holin family	NA
UHGV-0195598_44	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0195598_44	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0195598_44	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-0195598_44	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0195598_45	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0195598_45	PHROG	phrog_435	endolysin	lysis
UHGV-0195598_45	UniRef90	UniRef90_UPI0003F8E66C	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0195598_45	eggNOG-mapper	536233.CLO_1381	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0195598_45	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0195598_45	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0195598_45	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-0195598_46	PHROG	phrog_18591	NA	unknown function
UHGV-0195598_46	eggNOG-mapper	1230343.CANP01000040_gene3044	NA	NA
UHGV-0195598_47	PHROG	phrog_28892	NA	unknown function
UHGV-0195598_47	UniRef90	UniRef90_B1V2Q3	Putative lipoprotein	NA
UHGV-0195598_47	eggNOG-mapper	1211817.CCAT010000008_gene969	NA	NA
UHGV-0195598_48	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0195598_48	UniRef90	UniRef90_UPI000417B85E	helix-turn-helix domain-containing protein	NA
UHGV-0195598_48	eggNOG-mapper	1196322.A370_01999	Helix-turn-helix XRE-family like proteins	NA
UHGV-0195598_48	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0195598_48	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0195598_48	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0195598_50	eggNOG-mapper	641107.CDLVIII_4141	NA	NA
UHGV-0195598_52	KOfam	K03466	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	NA
UHGV-0195598_52	PHROG	phrog_1358	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UHGV-0195598_52	UniRef90	UniRef90_A0A6M1VJC8	FtsK domain-containing protein	NA
UHGV-0195598_52	eggNOG-mapper	1415774.U728_1054	FtsK/SpoIIIE family	NA
UHGV-0195598_52	COG	COG1674	DNA segregation ATPase FtsK/SpoIIIE or related protein	NA
UHGV-0195598_52	Structural annotation	PF01580, PF17854, MF_00350, NF041214, COG0433	NA	NA
UHGV-0195598_53	PHROG	phrog_9996	NA	unknown function
UHGV-0195598_53	eggNOG-mapper	1415774.U728_1053	NA	NA
UHGV-0195598_53	Structural annotation	PF18954, NF041423, COG1846	NA	NA
UHGV-0195598_55	KOfam	K00609	pyrB, PYR2; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]	NA
UHGV-0195598_55	PHROG	phrog_37670	NA	unknown function
UHGV-0195598_55	UniRef90	UniRef90_A0A1U6JGX0	Aspartate carbamoyltransferase	NA
UHGV-0195598_55	eggNOG-mapper	195103.CPF_1387	Belongs to the ATCase OTCase family	NA
UHGV-0195598_55	Pfam	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain	OTCace_N
UHGV-0195598_55	COG	COG0540	Aspartate carbamoyltransferase, catalytic subunit	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0195598	Yes	37,024 bps	28.45%	94.34%	0.9474