vOTU-074420

Overview

vOTU representative UHGV-0194977

No. of genomes 3

Genome length 40,450 bps

Completeness 99.36% (high-quality)

Host Lachnospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-074420
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00035 › vSUBFAM-00161 › vGENUS-00490 › vSUBGEN-00254 › vOTU-074420
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0194977
BioSample	SAMN09781729
Genome length	40,450 bps
CheckV completeness	99.36% (high-quality)
CheckV contamination	0.00%
CDS count	63
CDS density	91.86%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0194977_1	eggNOG-mapper	411463.EUBVEN_00935	FtsX-like permease family	NA
UHGV-0194977_1	COG	COG0577	ABC-type antimicrobial peptide transport system, permease component	NA
UHGV-0194977_2	PHROG	phrog_33061	NA	unknown function
UHGV-0194977_2	eggNOG-mapper	411459.RUMOBE_01712	NA	NA
UHGV-0194977_2	Structural annotation	PF19087, NF033202	NA	NA
UHGV-0194977_3	PHROG	phrog_14030	NA	unknown function
UHGV-0194977_3	UniRef90	UniRef90_A0A496NMU2	Cell surface protein	NA
UHGV-0194977_3	eggNOG-mapper	1095750.HMPREF9970_0318	Putative cell wall binding repeat	NA
UHGV-0194977_3	COG	COG5263	Glucan-binding domain (YG repeat)	NA
UHGV-0194977_3	Structural annotation	PF18342, NF041850, COG4991	NA	NA
UHGV-0194977_5	PHROG	phrog_36029	NA	unknown function
UHGV-0194977_5	eggNOG-mapper	411468.CLOSCI_01511	NA	NA
UHGV-0194977_6	eggNOG-mapper	1280671.AUJH01000012_gene3135	NA	NA
UHGV-0194977_7	PHROG	phrog_1863	NA	unknown function
UHGV-0194977_7	eggNOG-mapper	742741.HMPREF9475_00442	NA	NA
UHGV-0194977_9	UniRef90	UniRef90_A0A417QX67	XkdX family protein	NA
UHGV-0194977_9	Pfam	PF09693	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
UHGV-0194977_9	Structural annotation	PF09693, TIGR01669	NA	NA
UHGV-0194977_10	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-0194977_10	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-0194977_10	UniRef90	UniRef90_A0A417QWZ1	Reverse transcriptase domain-containing protein	NA
UHGV-0194977_10	eggNOG-mapper	411468.CLOSCI_01505	Reverse transcriptase (RNA-dependent DNA polymerase)	NA
UHGV-0194977_10	PADLOC	icity0040	RT (reverse transcriptase)	CRISPR-CAS
UHGV-0194977_10	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-0194977_10	COG	COG3344	Retron-type reverse transcriptase	NA
UHGV-0194977_10	Structural annotation	PF00078, MF_01390, TIGR04416, COG3344	NA	NA
UHGV-0194977_11	PHROG	phrog_5302	tail protein	tail
UHGV-0194977_11	UniRef90	UniRef90_A0A4R1ANY5	Fibronectin type-III domain-containing protein	NA
UHGV-0194977_11	eggNOG-mapper	742741.HMPREF9475_00438	NA	NA
UHGV-0194977_11	Structural annotation	COG1262	NA	NA
UHGV-0194977_12	PHROG	phrog_38006	NA	unknown function
UHGV-0194977_12	eggNOG-mapper	411468.CLOSCI_01503	NA	NA
UHGV-0194977_13	PHROG	phrog_31398	NA	unknown function
UHGV-0194977_13	UniRef90	UniRef90_A0A417VHC6	NA	NA
UHGV-0194977_13	eggNOG-mapper	411459.RUMOBE_01721	NA	NA
UHGV-0194977_13	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0194977_13	Structural annotation	PF10651, NF033814, COG2372	NA	NA
UHGV-0194977_16	PHROG	phrog_18110	NA	unknown function
UHGV-0194977_16	UniRef90	UniRef90_A0A373S6M8	Prophage_tail domain-containing protein	NA
UHGV-0194977_16	eggNOG-mapper	411459.RUMOBE_01723	Phage minor structural protein	NA
UHGV-0194977_16	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0194977_16	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0194977_16	COG	COG4926	Phage-related protein	NA
UHGV-0194977_16	Structural annotation	PF06605, PF18994, TIGR01665, COG4926	NA	NA
UHGV-0194977_17	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0194977_17	UniRef90	UniRef90_UPI001D05C493	phage tail family protein	NA
UHGV-0194977_17	eggNOG-mapper	411459.RUMOBE_01724	phage tail	NA
UHGV-0194977_17	COG	COG4722	Phage-related protein YomH	NA
UHGV-0194977_17	Structural annotation	PF20753, PF19266, TIGR01633, COG4722	NA	NA
UHGV-0194977_18	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-0194977_18	UniRef90	UniRef90_A0A3R6TZG0	Phage tail tape measure protein	NA
UHGV-0194977_18	eggNOG-mapper	411459.RUMOBE_01725	Phage tail tape measure protein, TP901 family	NA
UHGV-0194977_18	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0194977_18	Pfam	PF04513	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
UHGV-0194977_18	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0194977_18	COG	COG5283	Phage-related tail protein	NA
UHGV-0194977_18	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0194977_19	PHROG	phrog_25901	NA	unknown function
UHGV-0194977_19	eggNOG-mapper	411459.RUMOBE_01726	NA	NA
UHGV-0194977_20	PHROG	phrog_13494	NA	unknown function
UHGV-0194977_20	eggNOG-mapper	411468.CLOSCI_01497	NA	NA
UHGV-0194977_20	Structural annotation	PF16462	NA	NA
UHGV-0194977_21	PHROG	phrog_88	major tail protein	tail
UHGV-0194977_21	UniRef90	UniRef90_A0A417VGN7	Major tail protein	NA
UHGV-0194977_21	eggNOG-mapper	411459.RUMOBE_01728	phage major tail protein, phi13 family	NA
UHGV-0194977_21	Pfam	PF04630	Phage tail tube protein	Phage_TTP_1
UHGV-0194977_21	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0194977_21	COG	COG5492	NA	NA
UHGV-0194977_21	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0194977_22	PHROG	phrog_78	tail terminator	connector
UHGV-0194977_22	UniRef90	UniRef90_I2E8V8	Gp10	NA
UHGV-0194977_22	eggNOG-mapper	195103.CPF_1580	NA	NA
UHGV-0194977_22	Structural annotation	PF05657, NF040576, COG3167	NA	NA
UHGV-0194977_23	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0194977_23	UniRef90	UniRef90_A0A174MCG9	Phage protein, HK97 gp10 family	NA
UHGV-0194977_23	eggNOG-mapper	411459.RUMOBE_01730	Phage protein, HK97 gp10 family	NA
UHGV-0194977_23	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0194977_23	Structural annotation	PF04883, TIGR01725	NA	NA
UHGV-0194977_24	UniRef90	UniRef90_A0A417VGC6	Phage head-tail adapter protein	NA
UHGV-0194977_24	eggNOG-mapper	411459.RUMOBE_01731	Phage head-tail adaptor	NA
UHGV-0194977_24	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0194977_24	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0194977_25	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-0194977_25	UniRef90	UniRef90_A0A3R6UCP2	Phage gp6-like head-tail connector protein	NA
UHGV-0194977_25	eggNOG-mapper	411459.RUMOBE_01732	NA	NA
UHGV-0194977_25	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0194977_25	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0194977_25	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0194977_26	PHROG	phrog_10	major head protein	head and packaging
UHGV-0194977_26	UniRef90	UniRef90_A0A3R6YBY5	Phage major capsid protein	NA
UHGV-0194977_26	eggNOG-mapper	411459.RUMOBE_01733	phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0194977_26	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0194977_26	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0194977_26	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0194977_26	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0194977_27	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0194977_27	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0194977_27	UniRef90	UniRef90_A0A417VFW3	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0194977_27	eggNOG-mapper	411459.RUMOBE_01734	Belongs to the peptidase S14 family	NA
UHGV-0194977_27	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0194977_27	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0194977_27	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-0194977_28	PHROG	phrog_12	portal protein	head and packaging
UHGV-0194977_28	UniRef90	UniRef90_A0A3R6XLQ1	Phage portal protein	NA
UHGV-0194977_28	eggNOG-mapper	411459.RUMOBE_01735	NA	NA
UHGV-0194977_28	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0194977_28	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0194977_28	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0194977_28	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0194977_29	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0194977_29	UniRef90	UniRef90_A0A417VH15	Terminase large subunit	NA
UHGV-0194977_29	eggNOG-mapper	411459.RUMOBE_01737	NA	NA
UHGV-0194977_29	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0194977_29	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0194977_29	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0194977_29	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0194977_30	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0194977_30	UniRef90	UniRef90_A0A417VG35	Phage terminase small subunit P27 family	NA
UHGV-0194977_30	eggNOG-mapper	411459.RUMOBE_01738	phage terminase, small subunit	NA
UHGV-0194977_30	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0194977_30	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-0194977_30	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0194977_30	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0194977_31	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0194977_31	UniRef90	UniRef90_A0A3R7BR43	HNH endonuclease	NA
UHGV-0194977_31	eggNOG-mapper	411459.RUMOBE_01739	NA	NA
UHGV-0194977_32	PHROG	phrog_1558	NA	unknown function
UHGV-0194977_32	UniRef90	UniRef90_UPI00112044DB	helix-turn-helix domain-containing protein	NA
UHGV-0194977_32	eggNOG-mapper	411459.RUMOBE_01740	NA	NA
UHGV-0194977_32	Pfam	PF08281	Sigma-70, region 4	Sigma70_r4_2
UHGV-0194977_32	Structural annotation	PF08281, MF_00674, TIGR01636, COG2739	NA	NA
UHGV-0194977_34	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0194977_34	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0194977_34	UniRef90	UniRef90_A0A417QWS3	Single-stranded DNA-binding protein	NA
UHGV-0194977_34	eggNOG-mapper	585394.RHOM_16640	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0194977_34	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0194977_34	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0194977_34	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0194977_34	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0194977_34	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0194977_36	KOfam	K07171	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	NA
UHGV-0194977_36	PHROG	phrog_1936	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UHGV-0194977_36	UniRef90	UniRef90_A0A417QWX3	Type II toxin-antitoxin system PemK/MazF family toxin	NA
UHGV-0194977_36	eggNOG-mapper	411470.RUMGNA_00216	PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA
UHGV-0194977_36	Pfam	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
UHGV-0194977_36	COG	COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	NA
UHGV-0194977_36	Structural annotation	PF02452, NF007386, COG2337	NA	NA
UHGV-0194977_37	PHROG	phrog_1315	NA	unknown function
UHGV-0194977_38	Structural annotation	PF14282	NA	NA
UHGV-0194977_39	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0194977_39	PHROG	phrog_15982	NA	unknown function
UHGV-0194977_39	UniRef90	UniRef90_A0A417VH73	ParB domain-containing protein	NA
UHGV-0194977_39	eggNOG-mapper	742741.HMPREF9475_00414	NA	NA
UHGV-0194977_39	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0194977_39	Pfam	PF12961	NA	DUF3850
UHGV-0194977_39	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0194977_39	Structural annotation	PF12961, PF02195, MF_02015, MF_00684, TIGR04285, NF003443, COG1475, COG3097	NA	NA
UHGV-0194977_40	eggNOG-mapper	411470.RUMGNA_00212	NA	NA
UHGV-0194977_41	Structural annotation	PF10627	NA	NA
UHGV-0194977_42	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-0194977_42	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0194977_42	UniRef90	UniRef90_A0A3R6XV13	ParA family protein	NA
UHGV-0194977_42	eggNOG-mapper	411459.RUMOBE_01750	CobQ CobB MinD ParA nucleotide binding domain protein	NA
UHGV-0194977_42	Pfam	PF13614	AAA domain	AAA_31
UHGV-0194977_42	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-0194977_42	Structural annotation	PF13614, MF_00533, NF010443, COG1192	NA	NA
UHGV-0194977_43	Structural annotation	PF12286, MF_00839, NF007780	NA	NA
UHGV-0194977_44	PHROG	phrog_824	NA	unknown function
UHGV-0194977_44	UniRef90	UniRef90_A0A417QX87	VRR-NUC domain-containing protein	NA
UHGV-0194977_44	eggNOG-mapper	742741.HMPREF9475_00407	VRR_NUC	NA
UHGV-0194977_44	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-0194977_46	KOfam	K08309	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	NA
UHGV-0194977_46	PHROG	phrog_19890	NA	unknown function
UHGV-0194977_46	UniRef90	UniRef90_A0A417QWR6	Lytic transglycosylase domain-containing protein	NA
UHGV-0194977_46	eggNOG-mapper	411470.RUMGNA_00204	Transglycosylase SLT domain protein	NA
UHGV-0194977_46	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-0194977_47	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0194977_47	UniRef90	UniRef90_A0A4P8IFK4	NA	NA
UHGV-0194977_47	eggNOG-mapper	411459.RUMOBE_01756	COG NOG14934 non supervised orthologous group	NA
UHGV-0194977_47	Structural annotation	PF21578	NA	NA
UHGV-0194977_51	Structural annotation	PF01375, NF002013, COG3502	NA	NA
UHGV-0194977_58	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0194977_58	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0194977_58	UniRef90	UniRef90_UPI001D120794	helix-turn-helix domain-containing protein	NA
UHGV-0194977_58	eggNOG-mapper	411470.RUMGNA_00191	DNA-binding helix-turn-helix protein	NA
UHGV-0194977_58	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0194977_58	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0194977_58	Structural annotation	PF01381, MF_00535, NF007257, COG1476	NA	NA
UHGV-0194977_59	PHROG	phrog_16443	NA	unknown function
UHGV-0194977_59	eggNOG-mapper	1423814.HMPREF0549_0133	NA	NA
UHGV-0194977_59	AcrCatalog	cluster_1135	NA	NA
UHGV-0194977_60	KOfam	K23779	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	NA
UHGV-0194977_60	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0194977_60	UniRef90	UniRef90_A0A3R6UM93	XRE family transcriptional regulator	NA
UHGV-0194977_60	eggNOG-mapper	411470.RUMGNA_00189	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0194977_60	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0194977_60	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0194977_61	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0194977_61	PHROG	phrog_95	integrase	integration and excision
UHGV-0194977_61	UniRef90	UniRef90_A0A3R6WU62	Site-specific recombinase	NA
UHGV-0194977_61	eggNOG-mapper	411470.RUMGNA_00187	Resolvase, N terminal domain	NA
UHGV-0194977_61	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0194977_61	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0194977_61	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0194977_61	Structural annotation	PF00239, NF041201, COG1961	NA	NA
UHGV-0194977_62	KOfam	K02003	ABC.CD.A; putative ABC transport system ATP-binding protein	NA
UHGV-0194977_62	PHROG	phrog_293	ABC transporter	moron, auxiliary metabolic gene and host takeover
UHGV-0194977_62	UniRef90	UniRef90_A0A0M6X0N0	Lipoprotein-releasing system ATP-binding protein LolD	NA
UHGV-0194977_62	eggNOG-mapper	411463.EUBVEN_00936	ABC transporter, ATP-binding protein	NA
UHGV-0194977_62	Pfam	PF00005	ABC transporter	ABC_tran
UHGV-0194977_62	COG	COG1136	ABC-type lipoprotein export system, ATPase component	NA
UHGV-0194977_62	Structural annotation	PF00005, MF_01005, NF008639, COG1136	NA	NA
UHGV-0194977_63	KOfam	K07651	resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]	NA
UHGV-0194977_63	PHROG	phrog_857	NA	unknown function
UHGV-0194977_63	UniRef90	UniRef90_UPI001EDCC47A	ATP-binding protein	NA
UHGV-0194977_63	eggNOG-mapper	411463.EUBVEN_00937	ATPase histidine kinase DNA gyrase B HSP90 domain protein	NA
UHGV-0194977_63	Pfam	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	HATPase_c
UHGV-0194977_63	COG	COG0642	Signal transduction histidine kinase	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0194977	Yes	40,450 bps	44.47%	99.36%	0.9783
UHGV-0174436	No	39,317 bps	44.62%	96.58%	0.9790
UHGV-0172986	No	16,099 bps	45.08%	39.56%	0.9808