vOTU-074972

Overview

vOTU representative UHGV-0200556

No. of genomes 5

Genome length 46,706 bps

Completeness 94.52% (high-quality)

Host Dialister sp000434475

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-074972
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-00943 › vGENUS-00848 › vSUBGEN-02202 › vOTU-074972
Host taxonomy	Bacteria › Firmicutes C › Negativicutes › Veillonellales › Dialisteraceae › Dialister › Dialister sp000434475
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0200556
BioSample	SAMN09781741
Genome length	46,706 bps
CheckV completeness	94.52% (high-quality)
CheckV contamination	0.00%
CDS count	66
CDS density	89.61%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0200556_1	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0200556_1	PHROG	phrog_95	integrase	integration and excision
UHGV-0200556_1	UniRef90	UniRef90_A0A349YNY9	Recombinase family protein	NA
UHGV-0200556_1	eggNOG-mapper	706434.HMPREF9429_00560	overlaps another CDS with the same product name	NA
UHGV-0200556_1	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0200556_1	Pfam	PF07508	Recombinase	Recombinase
UHGV-0200556_1	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0200556_1	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0200556_1	Structural annotation	PF00239, PF07508, NF041201, COG1961	NA	NA
UHGV-0200556_2	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0200556_2	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0200556_2	UniRef90	UniRef90_A0A349YNZ0	LexA family transcriptional regulator	NA
UHGV-0200556_2	eggNOG-mapper	1273103.NM10_06896	Peptidase S24-like	NA
UHGV-0200556_2	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0200556_2	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0200556_2	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0200556_2	Structural annotation	PF01381, PF00717, MF_00015, NF041951, COG1396	NA	NA
UHGV-0200556_5	PHROG	phrog_14367	NA	unknown function
UHGV-0200556_5	UniRef90	UniRef90_A0A1G5VJC5	LysM domain-containing protein	NA
UHGV-0200556_5	Pfam	PF01476	LysM domain	LysM
UHGV-0200556_5	COG	COG1388	LysM repeat	NA
UHGV-0200556_5	Structural annotation	MF_02014, NF010723, COG1388	NA	NA
UHGV-0200556_7	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0200556_7	UniRef90	UniRef90_R5BGH3	Conserved domain protein	NA
UHGV-0200556_7	eggNOG-mapper	1507.HMPREF0262_00432	NA	NA
UHGV-0200556_7	Structural annotation	PF05772	NA	NA
UHGV-0200556_8	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0200556_8	UniRef90	UniRef90_A0A7K0A782	HNHc domain-containing protein (Fragment)	NA
UHGV-0200556_8	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0200556_8	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0200556_8	Structural annotation	PF01844, COG1403	NA	NA
UHGV-0200556_9	eggNOG-mapper	411470.RUMGNA_02287	Replication initiator protein A (RepA) N-terminus	NA
UHGV-0200556_9	COG	COG1349	DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family	NA
UHGV-0200556_10	Structural annotation	PF11417	NA	NA
UHGV-0200556_12	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0200556_12	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0200556_12	UniRef90	UniRef90_R6AVI9	Single-stranded DNA-binding protein	NA
UHGV-0200556_12	eggNOG-mapper	1000569.HMPREF1040_0509	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0200556_12	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0200556_12	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0200556_12	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0200556_12	Structural annotation	PF00436, MF_00984, NF005242, COG0629	NA	NA
UHGV-0200556_14	KOfam	K01520	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	NA
UHGV-0200556_14	PHROG	phrog_135	dUTPase	DNA, RNA and nucleotide metabolism
UHGV-0200556_14	UniRef90	UniRef90_A0A348APX9	Deoxyuridine 5'-triphosphate nucleotidohydrolase	NA
UHGV-0200556_14	eggNOG-mapper	401526.TcarDRAFT_0594	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	NA
UHGV-0200556_14	Pfam	PF00692	dUTPase	dUTPase
UHGV-0200556_14	COG	COG0756	dUTP pyrophosphatase (dUTPase)	NA
UHGV-0200556_14	Structural annotation	PF00692, MF_00116, NF010561, COG0756	NA	NA
UHGV-0200556_15	PHROG	phrog_9298	radical SAM domain protein	other
UHGV-0200556_15	eggNOG-mapper	158190.SpiGrapes_2456	radical SAM domain protein	NA
UHGV-0200556_15	COG	COG1032	Radical SAM superfamily enzyme YgiQ, UPF0313 family	NA
UHGV-0200556_15	Structural annotation	MF_01865, NF038361, COG0621	NA	NA
UHGV-0200556_21	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0200556_21	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0200556_21	UniRef90	UniRef90_UPI0014759F4E	DNA cytosine methyltransferase	NA
UHGV-0200556_21	eggNOG-mapper	585503.HMPREF7545_1724	Cytosine-specific methyltransferase	NA
UHGV-0200556_21	PADLOC	oMTase_00004	orphan methyltransferase	RM
UHGV-0200556_21	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0200556_21	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0200556_21	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0200556_21	Structural annotation	PF00145, MF_00607, TIGR00675, COG0270	NA	NA
UHGV-0200556_22	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0200556_22	PHROG	phrog_16528	DNA methyltransferase	other
UHGV-0200556_22	UniRef90	UniRef90_A0A316P432	DNA (cytosine-5-)-methyltransferase (Fragment)	NA
UHGV-0200556_22	eggNOG-mapper	1232443.BAIA02000103_gene2904	C-5 cytosine-specific DNA methylase	NA
UHGV-0200556_22	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0200556_22	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0200556_27	KOfam	K19170	dndC; DNA sulfur modification protein DndC	NA
UHGV-0200556_27	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0200556_27	UniRef90	UniRef90_A0A336QRR1	Phosphoadenosine phosphosulfate reductase family	NA
UHGV-0200556_27	eggNOG-mapper	469617.FUAG_00816	Phosphoadenosine phosphosulfate reductase family	NA
UHGV-0200556_27	PADLOC	SspD_00001	SspD	SSP
UHGV-0200556_27	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0200556_27	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0200556_27	Structural annotation	PF01507, MF_00063, TIGR00434, COG0175	NA	NA
UHGV-0200556_30	PHROG	phrog_236	nucleotide kinase	other
UHGV-0200556_30	UniRef90	UniRef90_UPI000D20ECCB	NA	NA
UHGV-0200556_30	eggNOG-mapper	889876.E2GLY2_9CAUD	NA	NA
UHGV-0200556_30	Pfam	PF11753	NA	DUF3310
UHGV-0200556_31	Structural annotation	PF07374, MF_00245, TIGR01636, COG2739	NA	NA
UHGV-0200556_33	PHROG	phrog_57	terminase small subunit	head and packaging
UHGV-0200556_33	Structural annotation	PF07471, NF040990, COG4220	NA	NA
UHGV-0200556_34	KOfam	K21512	gpA; terminase, large subunit [EC:3.1.21.4]	NA
UHGV-0200556_34	PHROG	phrog_15	terminase large subunit	head and packaging
UHGV-0200556_34	UniRef90	UniRef90_E4LA55	Phage terminase large subunit (GpA)	NA
UHGV-0200556_34	eggNOG-mapper	910314.HMPREF9220_0622	Phage terminase large subunit (GpA)	NA
UHGV-0200556_34	Pfam	PF05876	Phage terminase large subunit gpA, ATPase domain	GpA_ATPase
UHGV-0200556_34	Pfam	PF20454	Terminase large subunit gpA, endonuclease domain	GpA_nuclease
UHGV-0200556_34	COG	COG5525	Phage terminase, large subunit GpA	NA
UHGV-0200556_34	Structural annotation	PF05876, PF20454, MF_04144, TIGR01547, COG5525	NA	NA
UHGV-0200556_36	PHROG	phrog_21	portal protein	head and packaging
UHGV-0200556_36	UniRef90	UniRef90_E4LA53	Phage portal protein, lambda family	NA
UHGV-0200556_36	eggNOG-mapper	910314.HMPREF9220_0620	Phage portal protein, lambda family	NA
UHGV-0200556_36	Pfam	PF05136	Phage portal protein, lambda family	Phage_portal_2
UHGV-0200556_36	NCBIFam	TIGR01539.1	phage portal protein	NA
UHGV-0200556_36	COG	COG5511	Phage capsid protein	NA
UHGV-0200556_36	Structural annotation	PF05136, MF_04135, TIGR01539, COG5511	NA	NA
UHGV-0200556_37	KOfam	K06904	NA	NA
UHGV-0200556_37	PHROG	phrog_4523	major head and protease protein	head and packaging
UHGV-0200556_37	UniRef90	UniRef90_E4LA52	Caudovirus prohead protease	NA
UHGV-0200556_37	eggNOG-mapper	910314.HMPREF9220_0619	Caudovirus prohead protease	NA
UHGV-0200556_37	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0200556_37	COG	COG3087	Cell division protein FtsN	NA
UHGV-0200556_37	Structural annotation	PF19821, PF04586, MF_04119, TIGR04387, TIGR01543, COG3740, COG4653	NA	NA
UHGV-0200556_38	PHROG	phrog_122	head decoration	head and packaging
UHGV-0200556_38	UniRef90	UniRef90_A0A316S7V6	DNA breaking-rejoining protein	NA
UHGV-0200556_38	Pfam	PF09956	NA	DUF2190
UHGV-0200556_38	COG	COG5471	Predicted phage recombinase, RecA/RadA family	NA
UHGV-0200556_38	Structural annotation	PF09956, COG5471	NA	NA
UHGV-0200556_39	Structural annotation	PF13856, COG5614	NA	NA
UHGV-0200556_40	eggNOG-mapper	910314.HMPREF9220_0616	NA	NA
UHGV-0200556_40	Structural annotation	PF05069, TIGR01725	NA	NA
UHGV-0200556_41	Structural annotation	PF20765, COG5003	NA	NA
UHGV-0200556_42	PHROG	phrog_290	minor tail protein	tail
UHGV-0200556_42	UniRef90	UniRef90_UPI0018C4C4AD	phage tail tube protein	NA
UHGV-0200556_42	eggNOG-mapper	910314.HMPREF9220_0614	NA	NA
UHGV-0200556_42	Pfam	PF18906	Phage tail tube protein	Phage_tube_2
UHGV-0200556_42	Structural annotation	PF18906, TIGR02241, TIGR02126, COG5437, COG3498	NA	NA
UHGV-0200556_44	PHROG	phrog_30973	NA	unknown function
UHGV-0200556_44	UniRef90	UniRef90_E4LA45	NlpC/P60 domain-containing protein	NA
UHGV-0200556_44	eggNOG-mapper	910314.HMPREF9220_0612	nuclear chromosome segregation	NA
UHGV-0200556_44	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-0200556_44	Pfam	PF09718	Lambda phage tail tape-measure protein (Tape_meas_lam_C)	Tape_meas_lam_C
UHGV-0200556_44	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0200556_45	eggNOG-mapper	1009370.ALO_04658	NA	NA
UHGV-0200556_45	Structural annotation	PF05939, TIGR02217, COG4718	NA	NA
UHGV-0200556_46	PHROG	phrog_18	minor tail protein	tail
UHGV-0200556_46	UniRef90	UniRef90_A0A380N670	Phage minor tail protein L	NA
UHGV-0200556_46	eggNOG-mapper	1128111.HMPREF0870_01758	Phage minor tail protein L	NA
UHGV-0200556_46	Pfam	PF05100	Phage minor tail protein L	Phage_tail_L
UHGV-0200556_46	COG	COG4672	Phage tail protein	NA
UHGV-0200556_46	Structural annotation	PF08875, TIGR01600, COG4672	NA	NA
UHGV-0200556_47	KOfam	K13695	nlpC; probable lipoprotein NlpC	NA
UHGV-0200556_47	PHROG	phrog_329	minor tail protein	tail
UHGV-0200556_47	UniRef90	UniRef90_A0A380N793	NlpC/P60 family	NA
UHGV-0200556_47	eggNOG-mapper	1128111.HMPREF0870_01757	cysteine-type peptidase activity	NA
UHGV-0200556_47	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-0200556_47	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0200556_47	Structural annotation	PF00877, NF008096, COG3234	NA	NA
UHGV-0200556_48	PHROG	phrog_31	baseplate hub protein Tal	tail
UHGV-0200556_48	UniRef90	UniRef90_A0A349YR63	Phage-tail_3 domain-containing protein (Fragment)	NA
UHGV-0200556_48	eggNOG-mapper	1123489.AUAN01000010_gene347	cellulase activity	NA
UHGV-0200556_48	Pfam	PF13550	Putative phage tail protein	Phage-tail_3
UHGV-0200556_48	NCBIFam	NF040662.1	host specificity factor TipJ family phage tail protein	NA
UHGV-0200556_48	COG	COG1511	NA	NA
UHGV-0200556_48	Structural annotation	PF13550, PF00041, PF16323, NF040662, COG4733	NA	NA
UHGV-0200556_50	KOfam	K14059	int; integrase	NA
UHGV-0200556_50	PHROG	phrog_1	integrase	integration and excision
UHGV-0200556_50	UniRef90	UniRef90_A0A3B9DV66	Recombinase XerC	NA
UHGV-0200556_50	eggNOG-mapper	1273103.NM10_01678	Phage integrase family	NA
UHGV-0200556_50	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0200556_50	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0200556_50	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0200556_50	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0200556_51	PHROG	phrog_32639	NA	unknown function
UHGV-0200556_51	Structural annotation	PF21611	NA	NA
UHGV-0200556_54	eggNOG-mapper	1378168.N510_03079	NA	NA
UHGV-0200556_55	Structural annotation	PF04545, MF_00674, NF001073, COG1342	NA	NA
UHGV-0200556_57	PHROG	phrog_16490	NA	unknown function
UHGV-0200556_57	UniRef90	UniRef90_A0A7M1RZU0	Spike protein/glycoprotein	NA
UHGV-0200556_57	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-0200556_58	eggNOG-mapper	397290.C810_01330	NA	NA
UHGV-0200556_59	PHROG	phrog_4105	NA	unknown function
UHGV-0200556_59	eggNOG-mapper	742743.HMPREF9453_00545	NA	NA
UHGV-0200556_61	PHROG	phrog_5867	endolysin	lysis
UHGV-0200556_61	UniRef90	UniRef90_A0A349YJ02	N-acetylmuramoyl-L-alanine amidase (Fragment)	NA
UHGV-0200556_61	eggNOG-mapper	592028.GCWU000321_01397	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0200556_61	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0200556_61	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-0200556_61	Structural annotation	MF_04111	NA	NA
UHGV-0200556_63	PHROG	phrog_6160	NA	unknown function
UHGV-0200556_63	eggNOG-mapper	1334242.S5W9D9_9VIRU	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0200556	Yes	46,706 bps	47.03%	94.52%	0.9769
UHGV-0176513	No	46,012 bps	47.15%	93.13%	0.9769
UHGV-0173150	No	41,429 bps	46.82%	83.85%	0.9765
UHGV-0199249	No	36,314 bps	47.68%	73.59%	0.9778
UHGV-0177835	No	35,470 bps	47.75%	71.83%	0.9778