vOTU-076514

Overview

vOTU representative UHGV-1932094

No. of genomes 6

Genome length 39,523 bps

Completeness 98.99% (high-quality)

Host RUG115 sp900066395

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-076514
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-01208 › vGENUS-01172 › vSUBGEN-29101 › vOTU-076514
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › RUG115 › RUG115 sp900066395
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1932094
BioSample	NA
Genome length	39,523 bps
CheckV completeness	98.99% (high-quality)
CheckV contamination	0.00%
CDS count	49
CDS density	95.03%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1932094_2	KOfam	K00262	E1.4.1.4, gdhA; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]	NA
UHGV-1932094_2	UniRef90	UniRef90_R7QZI1	Glutamate dehydrogenase	NA
UHGV-1932094_2	eggNOG-mapper	1235802.C823_01914	Belongs to the Glu Leu Phe Val dehydrogenases family	NA
UHGV-1932094_2	Pfam	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain	ELFV_dehydrog_N
UHGV-1932094_2	Pfam	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase	ELFV_dehydrog
UHGV-1932094_2	NCBIFam	NF006929.0	NADP-specific glutamate dehydrogenase	NA
UHGV-1932094_2	COG	COG0334	Glutamate dehydrogenase/leucine dehydrogenase	NA
UHGV-1932094_2	Structural annotation	PF00208, PF02812, MF_01619, NF006929, COG0334	NA	NA
UHGV-1932094_3	KOfam	K14059	int; integrase	NA
UHGV-1932094_3	PHROG	phrog_1	integrase	integration and excision
UHGV-1932094_3	UniRef90	UniRef90_A0A416Z2R8	Tyr recombinase domain-containing protein	NA
UHGV-1932094_3	eggNOG-mapper	585394.RHOM_14030	Belongs to the 'phage' integrase family	NA
UHGV-1932094_3	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1932094_3	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1932094_3	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-1932094_4	UniRef90	UniRef90_A0A3R6Q4V1	YHYH domain-containing protein	NA
UHGV-1932094_4	eggNOG-mapper	756499.Desde_3141	Bacterial Ig-like domain 2	NA
UHGV-1932094_4	NCBIFam	NF033223.2	YHYH domain-containing protein	NA
UHGV-1932094_4	COG	COG5492	NA	NA
UHGV-1932094_5	UniRef90	UniRef90_A0A3R6QMJ7	XRE family transcriptional regulator	NA
UHGV-1932094_5	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1932094_5	COG	COG3620	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	NA
UHGV-1932094_5	Structural annotation	PF01381, NF041951, COG3655	NA	NA
UHGV-1932094_7	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-1932094_7	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-1932094_7	UniRef90	UniRef90_A0A3R6UL37	XRE family transcriptional regulator	NA
UHGV-1932094_7	eggNOG-mapper	1095750.HMPREF9970_1686	Helix-turn-helix XRE-family like proteins	NA
UHGV-1932094_7	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-1932094_7	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1932094_7	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-1932094_9	Structural annotation	PF09035	NA	NA
UHGV-1932094_10	PHROG	phrog_6058	NA	unknown function
UHGV-1932094_10	UniRef90	UniRef90_A0A416Z3U8	Helix-turn-helix domain-containing protein	NA
UHGV-1932094_10	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-1932094_13	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1932094_13	eggNOG-mapper	1235800.C819_02258	NA	NA
UHGV-1932094_13	Structural annotation	PF21578, NF041486	NA	NA
UHGV-1932094_14	KOfam	K03469	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	NA
UHGV-1932094_14	UniRef90	UniRef90_A0A416Z2U3	RNase H type-1 domain-containing protein	NA
UHGV-1932094_14	eggNOG-mapper	1163389.OOM_1312	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	NA
UHGV-1932094_14	Pfam	PF00075	RNase H	RNase_H
UHGV-1932094_14	COG	COG0328	Ribonuclease HI	NA
UHGV-1932094_14	Structural annotation	PF00075, MF_00042, NF001236, COG0328	NA	NA
UHGV-1932094_15	PHROG	phrog_7370	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1932094_15	UniRef90	UniRef90_UPI00164A90AD	HNH endonuclease	NA
UHGV-1932094_15	eggNOG-mapper	1235800.C819_02254	HNH nucleases	NA
UHGV-1932094_16	PHROG	phrog_24368	NA	unknown function
UHGV-1932094_16	eggNOG-mapper	411902.CLOBOL_03886	NA	NA
UHGV-1932094_17	KOfam	K19779	ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]	NA
UHGV-1932094_17	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-1932094_17	UniRef90	UniRef90_A0A317UED7	Restriction alleviation protein, Lar family	NA
UHGV-1932094_17	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-1932094_17	NCBIFam	TIGR03655.1	Lar family restriction alleviation protein	NA
UHGV-1932094_17	dbAPIS	APIS033	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	NA
UHGV-1932094_20	eggNOG-mapper	1235792.C808_00065	NA	NA
UHGV-1932094_21	PHROG	phrog_8470	NA	unknown function
UHGV-1932094_21	UniRef90	UniRef90_UPI001E5C1444	PcfJ domain-containing protein	NA
UHGV-1932094_21	eggNOG-mapper	1280698.AUJS01000007_gene1018	NA	NA
UHGV-1932094_21	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-1932094_21	Structural annotation	PF14284	NA	NA
UHGV-1932094_22	PHROG	phrog_15077	NA	unknown function
UHGV-1932094_22	UniRef90	UniRef90_A0A3A6HZA9	NA	NA
UHGV-1932094_22	eggNOG-mapper	1280698.AUJS01000007_gene1019	NA	NA
UHGV-1932094_22	Structural annotation	PF11300, NF038070	NA	NA
UHGV-1932094_24	Structural annotation	PF09889, COG4068	NA	NA
UHGV-1932094_25	UniRef90	UniRef90_A0A415TX35	BAH domain-containing protein	NA
UHGV-1932094_25	eggNOG-mapper	397290.C810_01492	NA	NA
UHGV-1932094_26	PHROG	phrog_5889	NA	unknown function
UHGV-1932094_26	UniRef90	UniRef90_A0A843HIF4	HDIG domain-containing protein	NA
UHGV-1932094_26	eggNOG-mapper	1235800.C819_00499	metal-dependent phosphohydrolase, HD sub domain	NA
UHGV-1932094_26	COG	COG3481	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	NA
UHGV-1932094_26	Structural annotation	PF21447, MF_01427, NF010007, COG3481	NA	NA
UHGV-1932094_30	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-1932094_30	PHROG	phrog_2606	terminase small subunit	head and packaging
UHGV-1932094_30	UniRef90	UniRef90_A0A3A9GB54	Phage portal protein	NA
UHGV-1932094_30	eggNOG-mapper	1415774.U728_838	terminase, small subunit	NA
UHGV-1932094_30	Pfam	PF06056	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
UHGV-1932094_30	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-1932094_30	COG	COG3728	Phage terminase, small subunit	NA
UHGV-1932094_30	Structural annotation	PF03592, COG3728	NA	NA
UHGV-1932094_31	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1932094_31	PHROG	phrog_979	terminase large subunit	head and packaging
UHGV-1932094_31	UniRef90	UniRef90_A0A2V2D4K5	Terminase-like family protein	NA
UHGV-1932094_31	eggNOG-mapper	748224.HMPREF9436_01395	Terminase-like family	NA
UHGV-1932094_31	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1932094_31	COG	COG1783	Phage terminase large subunit	NA
UHGV-1932094_31	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1932094_32	PHROG	phrog_156	portal protein	head and packaging
UHGV-1932094_32	eggNOG-mapper	748224.HMPREF9436_02547	NA	NA
UHGV-1932094_32	Structural annotation	PF16510, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-1932094_33	KOfam	K07584	NA	NA
UHGV-1932094_33	PHROG	phrog_4478	peptidase	other
UHGV-1932094_33	UniRef90	UniRef90_A0A416Z2U9	Ribosomal-processing cysteine protease Prp	NA
UHGV-1932094_33	eggNOG-mapper	1235793.C809_02740	Cysteine protease Prp	NA
UHGV-1932094_33	Pfam	PF04327	Cysteine protease Prp	Peptidase_Prp
UHGV-1932094_33	COG	COG2868	NA	NA
UHGV-1932094_34	PHROG	phrog_13908	NA	unknown function
UHGV-1932094_34	eggNOG-mapper	1321782.HMPREF1986_00346	NA	NA
UHGV-1932094_35	PHROG	phrog_1357	major head protein	head and packaging
UHGV-1932094_35	UniRef90	UniRef90_A0A3R6PQZ4	N4-gp56 family major capsid protein	NA
UHGV-1932094_35	eggNOG-mapper	657322.FPR_02330	NA	NA
UHGV-1932094_35	Pfam	PF13252	NA	DUF4043
UHGV-1932094_35	NCBIFam	TIGR04387.1	N4-gp56 family major capsid protein	NA
UHGV-1932094_35	Structural annotation	PF13252, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1932094_36	PHROG	phrog_15239	NA	unknown function
UHGV-1932094_37	PHROG	phrog_12105	NA	unknown function
UHGV-1932094_37	eggNOG-mapper	1226322.HMPREF1545_03850	NA	NA
UHGV-1932094_38	PHROG	phrog_511	internal virion protein	head and packaging
UHGV-1932094_38	eggNOG-mapper	1321782.HMPREF1986_00351	NA	NA
UHGV-1932094_38	Structural annotation	PF11134, TIGR03300, NF038126, COG1520	NA	NA
UHGV-1932094_40	PHROG	phrog_21397	NA	unknown function
UHGV-1932094_40	eggNOG-mapper	411483.FAEPRAA2165_01035	NA	NA
UHGV-1932094_41	KOfam	K10402	KIF20; kinesin family member 20	NA
UHGV-1932094_41	PHROG	phrog_22978	NA	unknown function
UHGV-1932094_41	UniRef90	UniRef90_R5G452	PBECR5 domain-containing protein	NA
UHGV-1932094_41	eggNOG-mapper	1410650.JHWL01000003_gene2814	NA	NA
UHGV-1932094_41	Pfam	PF18760	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
UHGV-1932094_42	PHROG	phrog_3639	minor tail protein	tail
UHGV-1932094_42	UniRef90	UniRef90_A0A3R6TVQ8	NA	NA
UHGV-1932094_42	eggNOG-mapper	1160721.RBI_I01572	NA	NA
UHGV-1932094_42	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-1932094_42	Structural annotation	PF10651, NF032891, COG2372	NA	NA
UHGV-1932094_44	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-1932094_44	PHROG	phrog_1	integrase	integration and excision
UHGV-1932094_44	UniRef90	UniRef90_A0A7U9S2Q9	Tyrosine recombinase XerC	NA
UHGV-1932094_44	eggNOG-mapper	1235790.C805_00610	Phage integrase, N-terminal SAM-like domain	NA
UHGV-1932094_44	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1932094_44	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-1932094_44	Structural annotation	PF00589, MF_02055, NF040815, COG4974	NA	NA
UHGV-1932094_45	Structural annotation	PF10618, MF_01370	NA	NA
UHGV-1932094_46	UniRef90	UniRef90_A0A011UAK9	Antitoxin	NA
UHGV-1932094_47	PHROG	phrog_199	holin	lysis
UHGV-1932094_47	UniRef90	UniRef90_A0A3R6Q4W7	Holin	NA
UHGV-1932094_47	eggNOG-mapper	411462.DORLON_00766	Bacteriophage holin family	NA
UHGV-1932094_47	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1932094_47	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1932094_47	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-1932094_47	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1932094_48	PHROG	phrog_1048	NA	unknown function
UHGV-1932094_48	UniRef90	UniRef90_A0A6B4HTU7	NA	NA
UHGV-1932094_48	eggNOG-mapper	1235800.C819_00487	NA	NA
UHGV-1932094_48	Pfam	PF11195	NA	DUF2829
UHGV-1932094_48	dbAPIS	APIS029	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	NA
UHGV-1932094_48	Structural annotation	PF11195	NA	NA
UHGV-1932094_49	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1932094_49	PHROG	phrog_435	endolysin	lysis
UHGV-1932094_49	UniRef90	UniRef90_A0A416Z2X7	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1932094_49	eggNOG-mapper	1469948.JPNB01000001_gene537	hmm pf01520	NA
UHGV-1932094_49	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1932094_49	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1932094_49	Structural annotation	PF01520, PF18342, MF_00417, TIGR02883, COG0860, COG4991	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1932094	Yes	39,523 bps	40.53%	98.99%	0.9758
UHGV-1520590	No	35,178 bps	40.61%	88.10%	0.9786
UHGV-1516919	No	35,136 bps	40.59%	88.00%	0.9788
UHGV-1508042	No	26,152 bps	40.09%	65.50%	0.9761
UHGV-2236119	No	15,386 bps	40.79%	38.53%	0.9769
UHGV-2220862	No	11,421 bps	41.50%	28.60%	0.9764