vOTU-077553

Overview

vOTU representative UHGV-2030863

No. of genomes 5

Genome length 43,165 bps

Completeness 99.90% (high-quality)

Host Holdemanella

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-077553
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00062 › vSUBFAM-00170 › vGENUS-07730 › vSUBGEN-06377 › vOTU-077553
Host taxonomy	Bacteria › Firmicutes › Bacilli › Erysipelotrichales › Erysipelotrichaceae › Holdemanella
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2030863
BioSample	NA
Genome length	43,165 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	73
CDS density	91.08%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2030863_6	UniRef90	UniRef90_A0A395WBY6	NA	NA
UHGV-2030863_8	Structural annotation	PF01104, NF041014	NA	NA
UHGV-2030863_12	Structural annotation	PF11061	NA	NA
UHGV-2030863_14	UniRef90	UniRef90_A0A413UEX6	NA	NA
UHGV-2030863_14	Pfam	PF07374	NA	DUF1492
UHGV-2030863_14	Structural annotation	PF07374, NF008895	NA	NA
UHGV-2030863_16	Structural annotation	PF10879	NA	NA
UHGV-2030863_17	PHROG	phrog_2316	NA	unknown function
UHGV-2030863_17	UniRef90	UniRef90_A0A3E4YBW5	NA	NA
UHGV-2030863_17	eggNOG-mapper	1280676.AUJO01000024_gene3262	NA	NA
UHGV-2030863_17	Structural annotation	PF16475, MF_00436, NF033216	NA	NA
UHGV-2030863_18	PHROG	phrog_88	major tail protein	tail
UHGV-2030863_18	eggNOG-mapper	862971.SANR_1246	phage major tail protein, phi13 family	NA
UHGV-2030863_18	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-2030863_21	COG	COG4842	Secreted virulence factor YukE/EsxA, WXG100 family	NA
UHGV-2030863_22	eggNOG-mapper	592031.GCWU000322_00057	NA	NA
UHGV-2030863_27	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2030863_27	UniRef90	UniRef90_A0A395WA48	HNH endonuclease	NA
UHGV-2030863_27	eggNOG-mapper	1211814.CAPG01000074_gene3460	HNH endonuclease	NA
UHGV-2030863_27	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2030863_27	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2030863_28	PHROG	phrog_361	terminase small subunit	head and packaging
UHGV-2030863_28	UniRef90	UniRef90_A0A1C6H6I9	Phage terminase, small subunit	NA
UHGV-2030863_28	eggNOG-mapper	1329516.JPST01000017_gene431	Phage terminase, small subunit	NA
UHGV-2030863_28	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-2030863_28	COG	COG3747	Phage terminase, small subunit	NA
UHGV-2030863_28	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-2030863_29	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2030863_29	UniRef90	UniRef90_A0A395WD03	Terminase large subunit	NA
UHGV-2030863_29	eggNOG-mapper	742740.HMPREF9474_04307	COG COG4626 Phage terminase-like protein, large subunit	NA
UHGV-2030863_29	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2030863_29	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2030863_29	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2030863_29	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-2030863_30	PHROG	phrog_12	portal protein	head and packaging
UHGV-2030863_30	UniRef90	UniRef90_A0A395W9X2	Phage portal protein	NA
UHGV-2030863_30	eggNOG-mapper	1203606.HMPREF1526_01337	Portal protein	NA
UHGV-2030863_30	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2030863_30	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2030863_30	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2030863_31	KOfam	K06904	NA	NA
UHGV-2030863_31	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-2030863_31	UniRef90	UniRef90_A0A413UET6	HK97 family phage prohead protease	NA
UHGV-2030863_31	eggNOG-mapper	411470.RUMGNA_02064	Caudovirus prohead serine protease	NA
UHGV-2030863_31	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-2030863_31	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-2030863_31	COG	COG3740	Phage head maturation protease	NA
UHGV-2030863_31	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-2030863_32	PHROG	phrog_10	major head protein	head and packaging
UHGV-2030863_32	UniRef90	UniRef90_A0A395WF70	Phage major capsid protein	NA
UHGV-2030863_32	eggNOG-mapper	1536774.H70357_10630	Phage capsid family	NA
UHGV-2030863_32	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2030863_32	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2030863_32	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2030863_32	Structural annotation	PF05065, PF19962, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2030863_33	PHROG	phrog_5223	neck protein	connector
UHGV-2030863_33	UniRef90	UniRef90_A0A374RXD1	DNA-packaging protein	NA
UHGV-2030863_33	Structural annotation	TIGR01560	NA	NA
UHGV-2030863_34	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-2030863_34	UniRef90	UniRef90_A0A395WC07	Head-tail adaptor protein	NA
UHGV-2030863_34	eggNOG-mapper	1243664.CAVL020000054_gene3020	head-tail adaptor	NA
UHGV-2030863_34	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-2030863_34	COG	COG5614	Phage head-tail adaptor	NA
UHGV-2030863_34	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2030863_35	eggNOG-mapper	1145276.T479_19945	NA	NA
UHGV-2030863_35	Structural annotation	PF05657, MF_00281, COG0016	NA	NA
UHGV-2030863_36	UniRef90	UniRef90_A0A374RUJ8	HK97 gp10 family phage protein	NA
UHGV-2030863_36	eggNOG-mapper	86416.Clopa_0344	NA	NA
UHGV-2030863_36	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-2030863_37	PHROG	phrog_88	major tail protein	tail
UHGV-2030863_37	UniRef90	UniRef90_A0A395WA58	Phage tail protein	NA
UHGV-2030863_37	eggNOG-mapper	1033744.CAEL01000029_gene1276	Phage major tail protein, phi13 family	NA
UHGV-2030863_37	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-2030863_37	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-2030863_38	Structural annotation	PF11836	NA	NA
UHGV-2030863_40	KOfam	K10421	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	NA
UHGV-2030863_40	PHROG	phrog_13339	tail length tape measure protein	tail
UHGV-2030863_40	UniRef90	UniRef90_A0A395WD11	Phage tail tape measure protein	NA
UHGV-2030863_40	eggNOG-mapper	999425.HMPREF9186_02045	Phage-related minor tail protein	NA
UHGV-2030863_40	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-2030863_40	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-2030863_40	COG	COG5283	Phage-related tail protein	NA
UHGV-2030863_43	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-2030863_43	UniRef90	UniRef90_A0A1C6JHE5	Phage-related protein	NA
UHGV-2030863_43	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-2030863_43	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-2030863_43	COG	COG4722	Phage-related protein YomH	NA
UHGV-2030863_43	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-2030863_44	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-2030863_44	eggNOG-mapper	1232446.BAIE02000002_gene836	Phage minor structural protein	NA
UHGV-2030863_44	Pfam	PF14200	Ricin-type beta-trefoil lectin domain-like	RicinB_lectin_2
UHGV-2030863_44	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-2030863_44	COG	COG4926	Phage-related protein	NA
UHGV-2030863_44	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-2030863_45	eggNOG-mapper	537007.BLAHAN_05252	NA	NA
UHGV-2030863_45	Structural annotation	PF10651, COG5513	NA	NA
UHGV-2030863_46	Structural annotation	PF05895, MF_04116, NF010681, COG1361	NA	NA
UHGV-2030863_47	Structural annotation	PF16407, TIGR02657, COG3794	NA	NA
UHGV-2030863_48	eggNOG-mapper	1232452.BAIB02000007_gene1610	NA	NA
UHGV-2030863_49	PHROG	phrog_15594	NA	unknown function
UHGV-2030863_49	eggNOG-mapper	1118055.CAGU01000013_gene763	NA	NA
UHGV-2030863_49	Structural annotation	PF16640, TIGR04488	NA	NA
UHGV-2030863_51	PHROG	phrog_24103	NA	unknown function
UHGV-2030863_51	eggNOG-mapper	1118055.CAGU01000013_gene761	NA	NA
UHGV-2030863_53	PHROG	phrog_28838	NA	unknown function
UHGV-2030863_53	Structural annotation	PF20086, TIGR04362	NA	NA
UHGV-2030863_54	PHROG	phrog_24451	NA	unknown function
UHGV-2030863_54	eggNOG-mapper	908340.HMPREF9406_2565	NA	NA
UHGV-2030863_55	PHROG	phrog_581	minor head protein	head and packaging
UHGV-2030863_55	UniRef90	UniRef90_UPI001D11B42B	phage minor capsid protein	NA
UHGV-2030863_55	eggNOG-mapper	1151292.QEW_4539	NA	NA
UHGV-2030863_55	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-2030863_55	COG	COG2369	NA	NA
UHGV-2030863_55	Structural annotation	PF06152	NA	NA
UHGV-2030863_56	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-2030863_56	UniRef90	UniRef90_A0A174GWW4	Phage minor structural protein GP20	NA
UHGV-2030863_56	eggNOG-mapper	411461.DORFOR_01166	COG NOG36366 non supervised orthologous group	NA
UHGV-2030863_56	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-2030863_57	PHROG	phrog_422	major head protein	head and packaging
UHGV-2030863_57	UniRef90	UniRef90_W0U896	Phage major capsid protein	NA
UHGV-2030863_57	eggNOG-mapper	1235794.C811_01371	NA	NA
UHGV-2030863_57	Structural annotation	PF21703, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-2030863_60	PHROG	phrog_3366	NA	unknown function
UHGV-2030863_60	eggNOG-mapper	632245.CLP_1651	NA	NA
UHGV-2030863_60	Structural annotation	PF20536, TIGR02126	NA	NA
UHGV-2030863_61	PHROG	phrog_556	minor head protein	head and packaging
UHGV-2030863_61	UniRef90	UniRef90_UPI00102FEF69	minor capsid protein	NA
UHGV-2030863_61	eggNOG-mapper	525255.HMPREF0077_0381	Minor capsid protein	NA
UHGV-2030863_61	Structural annotation	PF11114	NA	NA
UHGV-2030863_62	PHROG	phrog_3266	tail completion	connector
UHGV-2030863_62	UniRef90	UniRef90_UPI000542DA3F	chloramphenicol resistance protein	NA
UHGV-2030863_62	eggNOG-mapper	1292035.H476_1010	NA	NA
UHGV-2030863_62	Structural annotation	PF12691	NA	NA
UHGV-2030863_63	PHROG	phrog_3099	NA	unknown function
UHGV-2030863_63	eggNOG-mapper	1125725.HMPREF1325_1337	NA	NA
UHGV-2030863_63	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-2030863_64	Structural annotation	PF16462	NA	NA
UHGV-2030863_65	PHROG	phrog_706	NA	unknown function
UHGV-2030863_65	UniRef90	UniRef90_UPI00156EC658	Gp15 family bacteriophage protein	NA
UHGV-2030863_65	eggNOG-mapper	1499683.CCFF01000017_gene2567	Bacteriophage Gp15 protein	NA
UHGV-2030863_65	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-2030863_65	Structural annotation	PF06854	NA	NA
UHGV-2030863_66	PHROG	phrog_5218	NA	unknown function
UHGV-2030863_66	UniRef90	UniRef90_A0A2N3LJP5	PhageMin_Tail domain-containing protein (Fragment)	NA
UHGV-2030863_66	eggNOG-mapper	908340.HMPREF9406_2570	Phage tail tape measure protein TP901	NA
UHGV-2030863_66	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-2030863_66	COG	COG5280	Phage-related minor tail protein	NA
UHGV-2030863_67	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-2030863_67	COG	COG5412	Phage-related protein	NA
UHGV-2030863_68	PHROG	phrog_36410	NA	unknown function
UHGV-2030863_68	UniRef90	UniRef90_A0A1C5VV34	Phage-related protein	NA
UHGV-2030863_68	eggNOG-mapper	1321782.HMPREF1986_02277	PFAM Phage tail protein	NA
UHGV-2030863_68	COG	COG4722	Phage-related protein YomH	NA
UHGV-2030863_68	Structural annotation	PF05709, PF20753, TIGR01633, COG4722	NA	NA
UHGV-2030863_69	PHROG	phrog_538	minor tail protein	tail
UHGV-2030863_69	UniRef90	UniRef90_A0A8J6IQQ3	Siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-2030863_69	eggNOG-mapper	1321782.HMPREF1986_02278	NA	NA
UHGV-2030863_69	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-2030863_69	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-2030863_70	PHROG	phrog_199	holin	lysis
UHGV-2030863_70	UniRef90	UniRef90_B0N8I2	Toxin secretion/phage lysis holin	NA
UHGV-2030863_70	eggNOG-mapper	445974.CLORAM_02916	Bacteriophage holin family	NA
UHGV-2030863_70	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-2030863_70	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-2030863_70	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-2030863_71	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-2030863_71	Structural annotation	PF07638, MF_00674, TIGR02954, COG1846	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2030863	Yes	43,165 bps	33.43%	99.90%	0.9799
UHGV-1441403	No	29,220 bps	32.85%	64.98%	0.9781
UHGV-2023420	No	25,311 bps	33.59%	56.30%	0.9789
UHGV-1760655	No	13,694 bps	34.72%	36.21%	0.9827
UHGV-0186195	No	13,674 bps	34.73%	36.15%	0.9827