vOTU-077775

Overview

No. of genomes 2

Genome length 30,826 bps

Completeness 91.77% (high-quality)

Host Clostridium sp001916075

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-077775
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00035 › vSUBFAM-04495 › vGENUS-07654 › vSUBGEN-06164 › vOTU-077775
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Clostridiales › Clostridiaceae › Clostridium › Clostridium sp001916075
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0009886
BioSample	SAMEA4765810
Genome length	30,826 bps
CheckV completeness	91.77% (high-quality)
CheckV contamination	0.00%
CDS count	43
CDS density	86.58%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0009886_1	KOfam	K03091	sigH; RNA polymerase sporulation-specific sigma factor	NA
UHGV-0009886_1	PHROG	phrog_351	RNA polymerase sigma factor	transcription regulation
UHGV-0009886_1	UniRef90	UniRef90_A0A1C6EQF8	RNA polymerase sigma-35 factor	NA
UHGV-0009886_1	eggNOG-mapper	1414720.CBYM010000009_gene3292	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	NA
UHGV-0009886_1	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-0009886_1	NCBIFam	TIGR02937.1	sigma-70 family RNA polymerase sigma factor	NA
UHGV-0009886_1	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0009886_2	KOfam	K02086	dnaD; DNA replication protein	NA
UHGV-0009886_2	PHROG	phrog_8102	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0009886_2	UniRef90	UniRef90_UPI000A58161B	helix-turn-helix domain-containing protein	NA
UHGV-0009886_2	eggNOG-mapper	632245.CLP_2588	NA	NA
UHGV-0009886_2	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0009886_2	Structural annotation	PF13730, MF_01586, NF040939, COG3355	NA	NA
UHGV-0009886_3	UniRef90	UniRef90_UPI000AABEC73	LLM class flavin-dependent oxidoreductase	NA
UHGV-0009886_3	eggNOG-mapper	1414720.CBYM010000002_gene549	NA	NA
UHGV-0009886_3	Structural annotation	PF20075, TIGR03070, COG3655	NA	NA
UHGV-0009886_4	UniRef90	UniRef90_A0A7X6ZVQ5	Helix-turn-helix domain-containing protein	NA
UHGV-0009886_4	eggNOG-mapper	1235798.C817_03463	NA	NA
UHGV-0009886_4	Structural annotation	PF20038, MF_01155, NF007617, COG3311	NA	NA
UHGV-0009886_6	PHROG	phrog_9243	NA	unknown function
UHGV-0009886_6	UniRef90	UniRef90_UPI00041BDBEB	NA	NA
UHGV-0009886_6	eggNOG-mapper	1031288.AXAA01000043_gene1772	NA	NA
UHGV-0009886_6	Pfam	PF12686	NA	DUF3800
UHGV-0009886_6	Structural annotation	MF_00052_A, NF011119	NA	NA
UHGV-0009886_7	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0009886_7	PHROG	phrog_3088	amidase	lysis
UHGV-0009886_7	UniRef90	UniRef90_A0A8I0A635	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0009886_7	eggNOG-mapper	1216932.CM240_0314	Ami_2	NA
UHGV-0009886_7	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0009886_7	Pfam	PF08460	Bacterial SH3 domain	SH3_5
UHGV-0009886_7	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0009886_7	Structural annotation	PF01510, PF08460, MF_04111, NF008758, COG5632	NA	NA
UHGV-0009886_8	UniRef90	UniRef90_UPI0018A9B2DB	holin	NA
UHGV-0009886_8	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-0009886_8	COG	COG5546	NA	NA
UHGV-0009886_9	PHROG	phrog_2429	involved in bacteriocin production or immunity	moron, auxiliary metabolic gene and host takeover
UHGV-0009886_9	UniRef90	UniRef90_UPI001EEE9176	BhlA/UviB family holin-like peptide	NA
UHGV-0009886_9	eggNOG-mapper	1415774.U728_1063	BhlA holin family	NA
UHGV-0009886_9	Pfam	PF10960	BhlA holin family	Holin_BhlA
UHGV-0009886_10	PHROG	phrog_14029	NA	unknown function
UHGV-0009886_10	UniRef90	UniRef90_UPI000853A704	phosphodiester glycosidase family protein	NA
UHGV-0009886_10	eggNOG-mapper	1499683.CCFF01000005_gene81	NA	NA
UHGV-0009886_10	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0009886_10	Pfam	PF09992	Phosphodiester glycosidase	NAGPA
UHGV-0009886_10	COG	COG2755	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	NA
UHGV-0009886_11	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0009886_11	UniRef90	UniRef90_UPI00164C43B2	phage tail protein	NA
UHGV-0009886_11	eggNOG-mapper	999411.HMPREF1092_03309	Prophage endopeptidase tail	NA
UHGV-0009886_11	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0009886_11	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0009886_11	COG	COG4926	Phage-related protein	NA
UHGV-0009886_11	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0009886_12	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0009886_12	UniRef90	UniRef90_UPI001C8B5B0F	phage tail family protein	NA
UHGV-0009886_12	eggNOG-mapper	195103.CPF_1575	tail component	NA
UHGV-0009886_12	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0009886_12	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-0009886_12	COG	COG4722	Phage-related protein YomH	NA
UHGV-0009886_12	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0009886_13	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-0009886_13	UniRef90	UniRef90_UPI001C8CC1D6	phage tail tape measure protein	NA
UHGV-0009886_13	eggNOG-mapper	180332.JTGN01000004_gene2272	Phage tail tape measure protein, TP901 family	NA
UHGV-0009886_13	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0009886_13	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0009886_13	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0009886_13	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0009886_15	PHROG	phrog_187	head-tail adaptor	connector
UHGV-0009886_15	eggNOG-mapper	411459.RUMOBE_01727	NA	NA
UHGV-0009886_15	Structural annotation	PF06896	NA	NA
UHGV-0009886_16	PHROG	phrog_88	major tail protein	tail
UHGV-0009886_16	UniRef90	UniRef90_UPI001C8B1A77	major tail protein	NA
UHGV-0009886_16	eggNOG-mapper	411468.CLOSCI_01496	phage major tail protein, phi13 family	NA
UHGV-0009886_16	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0009886_16	COG	COG5492	NA	NA
UHGV-0009886_16	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0009886_17	PHROG	phrog_78	tail terminator	connector
UHGV-0009886_17	UniRef90	UniRef90_T0D5T1	Putative gp10 protein	NA
UHGV-0009886_17	eggNOG-mapper	195103.CPF_1580	NA	NA
UHGV-0009886_17	Structural annotation	PF05657, NF040576, COG3167	NA	NA
UHGV-0009886_18	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0009886_18	UniRef90	UniRef90_UPI00164C40CD	HK97 gp10 family phage protein	NA
UHGV-0009886_18	eggNOG-mapper	195103.CPF_1581	Phage protein, HK97 gp10 family	NA
UHGV-0009886_18	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0009886_18	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0009886_18	Structural annotation	PF04883, TIGR01725	NA	NA
UHGV-0009886_19	PHROG	phrog_25	head closure Hc1	connector
UHGV-0009886_19	UniRef90	UniRef90_A0A1C6DM66	Bacteriophage head-tail adaptor	NA
UHGV-0009886_19	eggNOG-mapper	411459.RUMOBE_01731	Phage head-tail adaptor	NA
UHGV-0009886_19	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0009886_19	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0009886_19	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0009886_20	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-0009886_20	UniRef90	UniRef90_UPI00115B5F02	head-tail connector protein	NA
UHGV-0009886_20	eggNOG-mapper	394503.Ccel_2955	Phage gp6-like head-tail connector protein	NA
UHGV-0009886_20	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0009886_20	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0009886_20	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0009886_21	PHROG	phrog_10	major head protein	head and packaging
UHGV-0009886_21	UniRef90	UniRef90_A0A8I0A645	Phage major capsid protein	NA
UHGV-0009886_21	eggNOG-mapper	1262449.CP6013_1042	Phage major capsid protein, HK97 family	NA
UHGV-0009886_21	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0009886_21	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0009886_21	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0009886_21	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0009886_22	KOfam	K06904	NA	NA
UHGV-0009886_22	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0009886_22	UniRef90	UniRef90_A0A1C6K131	Phage prohead protease, HK97 family	NA
UHGV-0009886_22	eggNOG-mapper	1187894.I2E8Y9_9CAUD	peptidase activity	NA
UHGV-0009886_22	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0009886_22	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0009886_22	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0009886_23	PHROG	phrog_12	portal protein	head and packaging
UHGV-0009886_23	UniRef90	UniRef90_A0A1C6DLG7	Phage portal protein, HK97 family	NA
UHGV-0009886_23	eggNOG-mapper	632245.CLP_2617	Phage portal protein, HK97 family	NA
UHGV-0009886_23	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0009886_23	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0009886_23	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0009886_23	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0009886_24	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0009886_24	UniRef90	UniRef90_A0A1C6K0V5	Phage terminase-like protein, large subunit	NA
UHGV-0009886_24	eggNOG-mapper	755731.Clo1100_1160	Terminase	NA
UHGV-0009886_24	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0009886_24	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0009886_24	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0009886_24	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0009886_25	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0009886_25	UniRef90	UniRef90_UPI0011591DA9	phage terminase small subunit P27 family	NA
UHGV-0009886_25	eggNOG-mapper	1262449.CP6013_1037	phage terminase small subunit	NA
UHGV-0009886_25	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0009886_25	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-0009886_25	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0009886_25	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0009886_26	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0009886_26	UniRef90	UniRef90_A0A1G9I4W9	Sigma-70, region 4	NA
UHGV-0009886_26	eggNOG-mapper	1196322.A370_01361	DNA-templated transcription, initiation	NA
UHGV-0009886_26	COG	COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	NA
UHGV-0009886_26	Structural annotation	PF06530, TIGR01636	NA	NA
UHGV-0009886_28	PHROG	phrog_25509	NA	unknown function
UHGV-0009886_28	eggNOG-mapper	1414720.CBYM010000002_gene580	NA	NA
UHGV-0009886_29	UniRef90	UniRef90_UPI0016255B8A	BC1881 family protein	NA
UHGV-0009886_29	NCBIFam	NF033495.1	BC1881 family protein	NA
UHGV-0009886_29	Structural annotation	NF033495	NA	NA
UHGV-0009886_31	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0009886_31	PHROG	phrog_4715	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0009886_31	UniRef90	UniRef90_R6LLI0	ParB protein	NA
UHGV-0009886_31	eggNOG-mapper	1211817.CCAT010000008_gene925	Belongs to the ParB family	NA
UHGV-0009886_31	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0009886_31	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0009886_31	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-0009886_34	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-0009886_34	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0009886_34	UniRef90	UniRef90_R6KWQ8	Soj protein	NA
UHGV-0009886_34	eggNOG-mapper	1235792.C808_00611	AAA domain	NA
UHGV-0009886_34	Pfam	PF13614	AAA domain	AAA_31
UHGV-0009886_34	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-0009886_34	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-0009886_35	Structural annotation	PF11148, MF_01553, COG5503	NA	NA
UHGV-0009886_36	PHROG	phrog_824	NA	unknown function
UHGV-0009886_36	UniRef90	UniRef90_R6G481	VRR-NUC domain protein	NA
UHGV-0009886_36	eggNOG-mapper	1414720.CBYM010000002_gene588	VRR-NUC domain	NA
UHGV-0009886_36	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-0009886_36	Structural annotation	PF08774	NA	NA
UHGV-0009886_37	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0009886_37	UniRef90	UniRef90_I2E8X7	Gp31	NA
UHGV-0009886_37	eggNOG-mapper	1151292.QEW_0318	NA	NA
UHGV-0009886_37	Structural annotation	PF21578	NA	NA
UHGV-0009886_39	UniRef90	UniRef90_R6KKT6	Helix-turn-helix domain protein	NA
UHGV-0009886_39	eggNOG-mapper	1391647.AVSV01000003_gene1778	Helix-turn-helix XRE-family like proteins	NA
UHGV-0009886_39	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0009886_42	Pfam	PF09388	Spo0E like sporulation regulatory protein	SpoOE-like

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0009886	Yes	30,826 bps	27.92%	91.77%	0.9670
UHGV-0017854	No	24,041 bps	28.17%	71.57%	0.9722