vOTU-078084

Overview

vOTU representative UHGV-2035767

No. of genomes 6

Genome length 31,927 bps

Completeness 90.75% (high-quality)

Host Ruminococcus E bromii B

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-078084
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00134 › vGENUS-00111 › vSUBGEN-06226 › vOTU-078084
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › Ruminococcus E › Ruminococcus E bromii B
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2035767
BioSample	SAMEA2737700
Genome length	31,927 bps
CheckV completeness	90.75% (high-quality)
CheckV contamination	0.00%
CDS count	39
CDS density	91.12%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2035767_1	KOfam	K14059	int; integrase	NA
UHGV-2035767_1	PHROG	phrog_1	integrase	integration and excision
UHGV-2035767_1	UniRef90	UniRef90_A0A1G5CL52	Phage integrase family protein	NA
UHGV-2035767_1	eggNOG-mapper	693746.OBV_41260	Belongs to the 'phage' integrase family	NA
UHGV-2035767_1	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2035767_1	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-2035767_1	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-2035767_2	UniRef90	UniRef90_UPI000E52DA24	zinc ribbon domain-containing protein	NA
UHGV-2035767_2	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-2035767_2	Structural annotation	PF18933, PF02883, MF_02248, NF008627, COG5435, COG2847	NA	NA
UHGV-2035767_3	PHROG	phrog_1914	NA	unknown function
UHGV-2035767_3	UniRef90	UniRef90_UPI000E543E50	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-2035767_3	eggNOG-mapper	1160721.RBI_I01604	NA	NA
UHGV-2035767_3	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-2035767_3	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-2035767_3	Structural annotation	PF06114, COG2856	NA	NA
UHGV-2035767_4	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2035767_4	UniRef90	UniRef90_UPI0015F3DE1D	helix-turn-helix domain-containing protein	NA
UHGV-2035767_4	eggNOG-mapper	663278.Ethha_2423	sequence-specific DNA binding	NA
UHGV-2035767_4	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2035767_4	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2035767_4	Structural annotation	PF13560, MF_00535, NF041951, COG1476	NA	NA
UHGV-2035767_5	UniRef90	UniRef90_UPI000E51362F	helix-turn-helix domain-containing protein	NA
UHGV-2035767_5	eggNOG-mapper	411461.DORFOR_00030	Helix-turn-helix XRE-family like proteins	NA
UHGV-2035767_5	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-2035767_5	Structural annotation	PF13443, NF041951, COG1396	NA	NA
UHGV-2035767_7	PHROG	phrog_585	NA	unknown function
UHGV-2035767_7	UniRef90	UniRef90_UPI00051C896C	NA	NA
UHGV-2035767_7	eggNOG-mapper	1033744.CAEL01000029_gene1306	NA	NA
UHGV-2035767_7	Pfam	PF10711	NA	DUF2513
UHGV-2035767_7	Structural annotation	PF10711, MF_01819, TIGR03433, COG3432	NA	NA
UHGV-2035767_9	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-2035767_9	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-2035767_9	UniRef90	UniRef90_UPI001C034617	phosphoadenosine phosphosulfate reductase family protein	NA
UHGV-2035767_9	eggNOG-mapper	1408437.JNJN01000032_gene2312	Phosphoadenosine phosphosulfate reductase	NA
UHGV-2035767_9	PADLOC	BrxP_00001	BrxP	BREX
UHGV-2035767_9	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-2035767_9	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-2035767_9	Structural annotation	PF01507, MF_00063, NF010369, COG0175	NA	NA
UHGV-2035767_10	PHROG	phrog_8684	NA	unknown function
UHGV-2035767_10	UniRef90	UniRef90_UPI000E48855B	YopX family protein	NA
UHGV-2035767_10	eggNOG-mapper	563031.HMPREF0666_01127	YopX protein	NA
UHGV-2035767_10	Pfam	PF09643	YopX protein	YopX
UHGV-2035767_11	PHROG	phrog_6058	NA	unknown function
UHGV-2035767_11	Structural annotation	NF033787	NA	NA
UHGV-2035767_13	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-2035767_13	PHROG	phrog_6218	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-2035767_13	UniRef90	UniRef90_A0A3D3D7T1	ParB domain-containing protein	NA
UHGV-2035767_13	eggNOG-mapper	394503.Ccel_3306	Belongs to the ParB family	NA
UHGV-2035767_13	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-2035767_13	NCBIFam	TIGR00180.1	ParB/RepB/Spo0J family partition protein	NA
UHGV-2035767_13	COG	COG0710	3-dehydroquinate dehydratase	NA
UHGV-2035767_13	Structural annotation	PF02195, PF18579, MF_02015, TIGR00180, COG1475	NA	NA
UHGV-2035767_14	KOfam	K03427	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	NA
UHGV-2035767_14	PHROG	phrog_5696	NA	unknown function
UHGV-2035767_14	UniRef90	UniRef90_UPI001B3C9C54	N-6 DNA methylase	NA
UHGV-2035767_14	eggNOG-mapper	397291.C804_06560	N-6 DNA Methylase	NA
UHGV-2035767_14	Pfam	PF02384	N-6 DNA Methylase	N6_Mtase
UHGV-2035767_14	COG	COG0286	Type I restriction-modification system, DNA methylase subunit	NA
UHGV-2035767_14	Structural annotation	COG0286	NA	NA
UHGV-2035767_15	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-2035767_15	PHROG	phrog_1	integrase	integration and excision
UHGV-2035767_15	UniRef90	UniRef90_A0A3D0XCX4	Integrase	NA
UHGV-2035767_15	eggNOG-mapper	484018.BACPLE_03294	Belongs to the 'phage' integrase family	NA
UHGV-2035767_15	Pfam	PF13495	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
UHGV-2035767_15	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2035767_15	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2035767_15	Structural annotation	PF00589, PF13495, MF_02055, NF040815, COG4974	NA	NA
UHGV-2035767_16	PHROG	phrog_323	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2035767_16	UniRef90	UniRef90_UPI001C01CFF8	SANT/Myb domain-containing protein	NA
UHGV-2035767_16	eggNOG-mapper	394503.Ccel_3305	SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains	NA
UHGV-2035767_16	Pfam	PF00249	Myb-like DNA-binding domain	Myb_DNA-binding
UHGV-2035767_16	dbAPIS	APIS006	Trigger programmed cell death (PCD) by P4 prophage.	NA
UHGV-2035767_16	Structural annotation	PF11112, NF040595	NA	NA
UHGV-2035767_19	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-2035767_19	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2035767_19	UniRef90	UniRef90_A0A374N9T4	XRE family transcriptional regulator	NA
UHGV-2035767_19	eggNOG-mapper	717605.Theco_0106	Cro/C1-type HTH DNA-binding domain	NA
UHGV-2035767_19	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2035767_19	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2035767_19	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-2035767_22	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2035767_22	eggNOG-mapper	1235800.C819_00515	NA	NA
UHGV-2035767_22	Structural annotation	PF21578, NF041486	NA	NA
UHGV-2035767_23	eggNOG-mapper	394503.Ccel_3053	NA	NA
UHGV-2035767_23	Structural annotation	TIGR01636	NA	NA
UHGV-2035767_24	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2035767_24	UniRef90	UniRef90_A0A412ULY9	HNH endonuclease	NA
UHGV-2035767_24	eggNOG-mapper	1158607.UAU_01026	HNH endonuclease	NA
UHGV-2035767_24	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2035767_24	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2035767_25	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-2035767_25	UniRef90	UniRef90_A0A4U7JDP0	P27 family phage terminase small subunit	NA
UHGV-2035767_25	eggNOG-mapper	86416.Clopa_0336	NA	NA
UHGV-2035767_25	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-2035767_25	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-2035767_26	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2035767_26	UniRef90	UniRef90_A0A412UM03	Terminase large subunit	NA
UHGV-2035767_26	eggNOG-mapper	86416.Clopa_0337	Phage Terminase	NA
UHGV-2035767_26	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2035767_26	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2035767_26	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2035767_26	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-2035767_27	PHROG	phrog_12	portal protein	head and packaging
UHGV-2035767_27	UniRef90	UniRef90_A0A412ULV9	Phage portal protein	NA
UHGV-2035767_27	eggNOG-mapper	1415774.U728_1254	Phage portal protein	NA
UHGV-2035767_27	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2035767_27	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-2035767_27	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2035767_27	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2035767_28	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-2035767_28	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-2035767_28	UniRef90	UniRef90_A0A412ULU1	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-2035767_28	eggNOG-mapper	86416.Clopa_0340	Belongs to the peptidase S14 family	NA
UHGV-2035767_28	Pfam	PF00574	Clp protease	CLP_protease
UHGV-2035767_28	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-2035767_28	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-2035767_29	PHROG	phrog_10	major head protein	head and packaging
UHGV-2035767_29	UniRef90	UniRef90_A0A412ULW9	Phage major capsid protein	NA
UHGV-2035767_29	eggNOG-mapper	1211817.CCAT010000053_gene2132	Phage capsid family	NA
UHGV-2035767_29	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2035767_29	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2035767_29	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2035767_29	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2035767_30	PHROG	phrog_749	NA	unknown function
UHGV-2035767_30	UniRef90	UniRef90_A0A1G5CMX8	Phage gp6-like head-tail connector protein	NA
UHGV-2035767_30	eggNOG-mapper	1211817.CCAT010000053_gene2133	NA	NA
UHGV-2035767_31	PHROG	phrog_19734	NA	unknown function
UHGV-2035767_31	UniRef90	UniRef90_UPI00057FE645	phage head closure protein	NA
UHGV-2035767_31	eggNOG-mapper	86416.Clopa_0343	NA	NA
UHGV-2035767_31	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-2035767_31	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2035767_32	eggNOG-mapper	272623.L59277	NA	NA
UHGV-2035767_32	Structural annotation	PF05657, MF_00281, COG0016	NA	NA
UHGV-2035767_33	UniRef90	UniRef90_UPI000E5564A4	HK97 gp10 family phage protein	NA
UHGV-2035767_33	eggNOG-mapper	1235792.C808_00089	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-2035767_33	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-2035767_33	Structural annotation	TIGR01725	NA	NA
UHGV-2035767_34	PHROG	phrog_88	major tail protein	tail
UHGV-2035767_34	UniRef90	UniRef90_A0A1G5CNS8	Phage major tail protein, phi13 family	NA
UHGV-2035767_34	eggNOG-mapper	1321782.HMPREF1986_01362	phage major tail protein, phi13 family	NA
UHGV-2035767_34	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-2035767_34	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-2035767_35	Structural annotation	PF11836	NA	NA
UHGV-2035767_36	KOfam	K20283	GOLGA4; golgin subfamily A member 4	NA
UHGV-2035767_36	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-2035767_36	UniRef90	UniRef90_A0A412ULX0	PhageMin_Tail domain-containing protein	NA
UHGV-2035767_36	eggNOG-mapper	588581.Cpap_1264	Tail tape measure protein, TP901 family	NA
UHGV-2035767_36	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-2035767_36	COG	COG5280	Phage-related minor tail protein	NA
UHGV-2035767_36	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-2035767_37	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-2035767_37	UniRef90	UniRef90_A0A1G5CPA2	Phage-related protein	NA
UHGV-2035767_37	eggNOG-mapper	1160721.RBI_I01575	Phage tail protein	NA
UHGV-2035767_37	COG	COG4722	Phage-related protein YomH	NA
UHGV-2035767_37	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-2035767_38	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-2035767_38	UniRef90	UniRef90_A0A1G5CPD2	Phage minor structural protein, N-terminal region	NA
UHGV-2035767_38	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-2035767_38	COG	COG1511	NA	NA
UHGV-2035767_38	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-2035767_39	PHROG	phrog_5302	tail protein	tail
UHGV-2035767_39	UniRef90	UniRef90_A0A373XLZ6	NA	NA
UHGV-2035767_39	eggNOG-mapper	742740.HMPREF9474_02337	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-2035767_39	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-2035767_39	Structural annotation	COG1262	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2035767	Yes	31,927 bps	39.73%	90.75%	0.9768
UHGV-1396376	No	29,583 bps	39.96%	84.08%	0.9779
UHGV-1448855	No	26,718 bps	40.20%	75.94%	0.9715
UHGV-0184048	No	26,678 bps	40.22%	75.83%	0.9718
UHGV-1441871	No	18,991 bps	40.70%	53.98%	0.9799
UHGV-1343416	No	16,827 bps	39.26%	47.83%	0.9800